RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ASIPP42127 132 aa14.25□□□□□ -0.13
TRIM35-203ENST00000521253 ZNF506Q5JVG8 444 aa14.25□□□□□ -0.13
TRIM35-203ENST00000521253 PTH2Q96A98 100 aa14.25□□□□□ -0.13
TRIM35-203ENST00000521253 UPK3BQ9BT76 320 aa14.25□□□□□ -0.13
TRIM35-203ENST00000521253 MRPL23Q16540 153 aaKnown RBP14.24□□□□□ -0.13
TRIM35-203ENST00000521253 CFAP126Q5VTH2 177 aa14.24□□□□□ -0.13
TRIM35-203ENST00000521253 LINC00336Q6ZUF6 198 aa14.24□□□□□ -0.13
TRIM35-203ENST00000521253 Q9H8V8 135 aa14.24□□□□□ -0.13
TRIM35-203ENST00000521253 K7EQD1 137 aa14.23□□□□□ -0.13
TRIM35-203ENST00000521253 RS1O15537 224 aa14.23□□□□□ -0.13
TRIM35-203ENST00000521253 GYPEP15421 78 aa14.23□□□□□ -0.13
TRIM35-203ENST00000521253 LINC01559Q495D7 138 aa14.23□□□□□ -0.13
TRIM35-203ENST00000521253 ZNF575Q86XF7 245 aa14.23□□□□□ -0.13
TRIM35-203ENST00000521253 BAGE2Q86Y30 109 aa14.23□□□□□ -0.13
TRIM35-203ENST00000521253 MLST8Q9BVC4 326 aa14.23□□□□□ -0.13
TRIM35-203ENST00000521253 IL36BQ9NZH7 164 aa14.23□□□□□ -0.13
TRIM35-203ENST00000521253 GRIFINA4D1Z8 144 aa14.22□□□□□ -0.13
TRIM35-203ENST00000521253 H3BVH4 76 aa14.22□□□□□ -0.13
TRIM35-203ENST00000521253 GATA1P15976 413 aaPredicted RBP14.22□□□□□ -0.13
TRIM35-203ENST00000521253 RPL35P42766 123 aaKnown RBP14.22□□□□□ -0.13
TRIM35-203ENST00000521253 DNLZQ5SXM8 178 aa14.22□□□□□ -0.13
TRIM35-203ENST00000521253 PCNPQ8WW12 178 aaKnown RBP14.22□□□□□ -0.13
TRIM35-203ENST00000521253 C11orf52Q96A22 123 aa14.22□□□□□ -0.13
TRIM35-203ENST00000521253 TMSB15BA0A087X1C1 80 aa14.21□□□□□ -0.13
TRIM35-203ENST00000521253 NKX2-5P52952 324 aaPredicted RBP14.21□□□□□ -0.13
TRIM35-203ENST00000521253 C1orf134Q5TEV5 83 aa14.21□□□□□ -0.13
TRIM35-203ENST00000521253 TXNDC17Q9BRA2 123 aa14.21□□□□□ -0.13
TRIM35-203ENST00000521253 DERL1Q9BUN8 251 aa14.21□□□□□ -0.13
TRIM35-203ENST00000521253 IGHV3-73A0A0B4J1V6 119 aa14.2□□□□□ -0.14
TRIM35-203ENST00000521253 ARMS2P0C7Q2 107 aa14.2□□□□□ -0.14
TRIM35-203ENST00000521253 SRIP30626 198 aa14.2□□□□□ -0.14
TRIM35-203ENST00000521253 ALKAL2Q6UX46 152 aa14.2□□□□□ -0.14
TRIM35-203ENST00000521253 NEGR1Q7Z3B1 354 aa14.2□□□□□ -0.14
TRIM35-203ENST00000521253 LOC100131303A0A0U1RQF7 123 aa14.19□□□□□ -0.14
TRIM35-203ENST00000521253 CIDEAO60543 219 aa14.19□□□□□ -0.14
TRIM35-203ENST00000521253 IFNA1P01562 189 aa14.19□□□□□ -0.14
TRIM35-203ENST00000521253 BCL2P10415 239 aa14.19□□□□□ -0.14
TRIM35-203ENST00000521253 MEF2BQ02080 365 aaPredicted RBP14.19□□□□□ -0.14
TRIM35-203ENST00000521253 SOHLH1Q5JUK2 328 aa14.19□□□□□ -0.14
TRIM35-203ENST00000521253 PIK3CD-AS1Q5SR53 167 aa14.19□□□□□ -0.14
TRIM35-203ENST00000521253 LYPD5Q6UWN5 251 aa14.19□□□□□ -0.14
TRIM35-203ENST00000521253 PRSS29PA6NIE9 313 aa14.18□□□□□ -0.14
TRIM35-203ENST00000521253 SLC25A29Q8N8R3 303 aa14.18□□□□□ -0.14
TRIM35-203ENST00000521253 KRTAP1-5Q9BYS1 174 aa14.18□□□□□ -0.14
TRIM35-203ENST00000521253 SCRT2Q9NQ03 307 aa14.18□□□□□ -0.14
TRIM35-203ENST00000521253 A8MWV9 139 aa14.17□□□□□ -0.14
TRIM35-203ENST00000521253 NXPH4O95158 308 aa14.17□□□□□ -0.14
TRIM35-203ENST00000521253 DMRTA1Q5VZB9 504 aa14.17□□□□□ -0.14
TRIM35-203ENST00000521253 PRR27Q6MZM9 219 aa14.17□□□□□ -0.14
TRIM35-203ENST00000521253 PARLQ9H300 379 aa14.17□□□□□ -0.14
TRIM35-203ENST00000521253 BOLA1Q9Y3E2 137 aa14.17□□□□□ -0.14
TRIM35-203ENST00000521253 TRBV6-4A0A1B0GX49 114 aa14.16□□□□□ -0.14
TRIM35-203ENST00000521253 PDE6DO43924 150 aa14.16□□□□□ -0.14
TRIM35-203ENST00000521253 RPL19P84098 196 aaKnown RBP14.16□□□□□ -0.14
TRIM35-203ENST00000521253 CENPWQ5EE01 88 aa14.16□□□□□ -0.14
TRIM35-203ENST00000521253 C6orf223Q8N319 242 aa14.16□□□□□ -0.14
TRIM35-203ENST00000521253 JPT2Q9H910 190 aa14.16□□□□□ -0.14
TRIM35-203ENST00000521253 VAX2Q9UIW0 290 aa14.16□□□□□ -0.14
TRIM35-203ENST00000521253 PKD1P98161 4303 aa14.16□□□□□ -0.14
TRIM35-203ENST00000521253 RHOHQ15669 191 aa14.15□□□□□ -0.14
TRIM35-203ENST00000521253 TTC32Q5I0X7 151 aa14.15□□□□□ -0.14
TRIM35-203ENST00000521253 SYT8Q8NBV8 401 aa14.15□□□□□ -0.14
TRIM35-203ENST00000521253 PHLDA3Q9Y5J5 127 aa14.15□□□□□ -0.14
TRIM35-203ENST00000521253 A0A1B0GVY2 172 aa14.14□□□□□ -0.15
TRIM35-203ENST00000521253 RAB19A4D1S5 217 aa14.14□□□□□ -0.15
TRIM35-203ENST00000521253 SIVA1O15304 175 aa14.14□□□□□ -0.15
TRIM35-203ENST00000521253 IGLV2-8P01709 118 aa14.14□□□□□ -0.15
TRIM35-203ENST00000521253 MGST1P10620 155 aaKnown RBP14.14□□□□□ -0.15
TRIM35-203ENST00000521253 ZFP2Q6ZN57 461 aa14.14□□□□□ -0.15
TRIM35-203ENST00000521253 Q6ZSN1 163 aa14.14□□□□□ -0.15
TRIM35-203ENST00000521253 PRADC1Q9BSG0 188 aa14.14□□□□□ -0.15
TRIM35-203ENST00000521253 SAMD10Q9BYL1 202 aa14.14□□□□□ -0.15
TRIM35-203ENST00000521253 MED9Q9NWA0 146 aa14.14□□□□□ -0.15
TRIM35-203ENST00000521253 PKHD1P08F94 4074 aa14.14□□□□□ -0.15
TRIM35-203ENST00000521253 A0A1W2PPQ1 181 aa14.13□□□□□ -0.15
TRIM35-203ENST00000521253 M0R381 172 aa14.13□□□□□ -0.15
TRIM35-203ENST00000521253 TAGLN2P37802 199 aaKnown RBP14.13□□□□□ -0.15
TRIM35-203ENST00000521253 BLOC1S1P78537 153 aa14.13□□□□□ -0.15
TRIM35-203ENST00000521253 UFSP1Q6NVU6 142 aa14.13□□□□□ -0.15
TRIM35-203ENST00000521253 CXCL1P09341 107 aa14.12□□□□□ -0.15
TRIM35-203ENST00000521253 GNG4P50150 75 aa14.12□□□□□ -0.15
TRIM35-203ENST00000521253 SH2D6Q7Z4S9 175 aa14.12□□□□□ -0.15
TRIM35-203ENST00000521253 ZFP82Q8N141 532 aa14.12□□□□□ -0.15
TRIM35-203ENST00000521253 TRBV20OR9-2A0A075B6H5 130 aa14.11□□□□□ -0.15
TRIM35-203ENST00000521253 MED14OSP0DP75 135 aa14.11□□□□□ -0.15
TRIM35-203ENST00000521253 SFRP2Q96HF1 295 aa14.11□□□□□ -0.15
TRIM35-203ENST00000521253 LYPD6BQ8NI32 183 aa14.1□□□□□ -0.15
TRIM35-203ENST00000521253 DNAH11Q96DT5 4516 aa14.1□□□□□ -0.15
TRIM35-203ENST00000521253 A0A087WWL8 130 aa14.09□□□□□ -0.15
TRIM35-203ENST00000521253 RHODO00212 210 aa14.09□□□□□ -0.15
TRIM35-203ENST00000521253 TIRAPP58753 221 aa14.09□□□□□ -0.15
TRIM35-203ENST00000521253 FAM74A4Q5TZK3 123 aa14.09□□□□□ -0.15
TRIM35-203ENST00000521253 WFDC10BQ8IUB3 73 aa14.09□□□□□ -0.15
TRIM35-203ENST00000521253 SMIM12Q96EX1 92 aa14.09□□□□□ -0.15
TRIM35-203ENST00000521253 SNAI2O43623 268 aa14.08□□□□□ -0.16
TRIM35-203ENST00000521253 CRYGDP07320 174 aa14.08□□□□□ -0.16
TRIM35-203ENST00000521253 TNP2Q05952 138 aa14.08□□□□□ -0.16
TRIM35-203ENST00000521253 C14orf178Q8N769 122 aaPredicted RBP14.08□□□□□ -0.16
TRIM35-203ENST00000521253 OR10AG1Q8NH19 301 aa14.08□□□□□ -0.16
TRIM35-203ENST00000521253 SSBP4Q9BWG4 385 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms