RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 A0A1W2PRS3 328 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 ATP6V1G2-DDX39BF2Z307 99 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 H3BRM9 83 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 HCRTO43612 131 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 AKAIN1P0CW23 69 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 IDO2Q6ZQW0 420 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 C3orf62Q6ZUJ4 267 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 DYNLRB2Q8TF09 96 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 PPDPFLQ8WWR9 84 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 C12orf57Q99622 126 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 TCEAL7Q9BRU2 100 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 AGPAT4-IT1Q9H0P7 198 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 CDC42SE1Q9NRR8 79 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 CFTRP13569 1480 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 MRC2Q9UBG0 1479 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 ANK1P16157 1881 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 TRPM7Q96QT4 1865 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 QRICH2Q9H0J4 1663 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 SPAARA0A1B0GVQ0 90 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 CCDC179H3BU77 68 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 GEMIN2O14893 280 aaKnown RBP1.21□□□□□ -2.22
PTPN12-213ENST00000519553 CCL25O15444 150 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 TNFP01375 233 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 IGHV3-30P01768 117 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 IGHV3-30-5P0DP03 117 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 RHOHQ15669 191 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 C14orf144Q96I85 54 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 PDCD10Q9BUL8 212 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 NAA60Q9H7X0 242 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 BOKQ9UMX3 212 aaPredicted RBP1.21□□□□□ -2.22
PTPN12-213ENST00000519553 C22orf24Q9Y442 160 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 CHD3Q12873 2000 aaKnown RBP1.21□□□□□ -2.22
PTPN12-213ENST00000519553 TNRC6BQ9UPQ9 1833 aaKnown RBP1.21□□□□□ -2.22
PTPN12-213ENST00000519553 TECTAO75443 2155 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 MCM3APO60318 1980 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 CASZ1Q86V15 1759 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 ROS1P08922 2347 aa1.21□□□□□ -2.22
PTPN12-213ENST00000519553 TNRC6AQ8NDV7 1962 aaKnown RBP1.2□□□□□ -2.22
PTPN12-213ENST00000519553 LRP5O75197 1615 aa1.2□□□□□ -2.22
PTPN12-213ENST00000519553 IGLV3-32A0A0A0MS00 114 aa1.2□□□□□ -2.22
PTPN12-213ENST00000519553 CXorf51AA0A1B0GTR3 108 aa1.2□□□□□ -2.22
PTPN12-213ENST00000519553 HIST1H1DP16402 221 aaKnown RBP1.2□□□□□ -2.22
PTPN12-213ENST00000519553 GNG4P50150 75 aa1.2□□□□□ -2.22
PTPN12-213ENST00000519553 OR2T2Q6IF00 324 aa1.2□□□□□ -2.22
PTPN12-213ENST00000519553 ODF3Q96PU9 254 aa1.2□□□□□ -2.22
PTPN12-213ENST00000519553 SPANXDQ9BXN6 97 aa1.2□□□□□ -2.22
PTPN12-213ENST00000519553 SEC11CQ9BY50 192 aa1.2□□□□□ -2.22
PTPN12-213ENST00000519553 IER3IP1Q9Y5U9 82 aa1.2□□□□□ -2.22
PTPN12-213ENST00000519553 SERP1Q9Y6X1 66 aa1.2□□□□□ -2.22
PTPN12-213ENST00000519553 PLXNA2O75051 1894 aa1.2□□□□□ -2.22
PTPN12-213ENST00000519553 MYOM2P54296 1465 aa1.19□□□□□ -2.22
PTPN12-213ENST00000519553 JMJD7-PLA2G4BH0Y9G9 81 aa1.19□□□□□ -2.22
PTPN12-213ENST00000519553 IGLV3-1P01715 115 aa1.19□□□□□ -2.22
PTPN12-213ENST00000519553 SMIM6P0DI80 62 aa1.19□□□□□ -2.22
PTPN12-213ENST00000519553 PDE6GP18545 87 aa1.19□□□□□ -2.22
PTPN12-213ENST00000519553 BCORL1Q5H9F3 1711 aa1.19□□□□□ -2.22
PTPN12-213ENST00000519553 SPANXN1Q5VSR9 72 aa1.19□□□□□ -2.22
PTPN12-213ENST00000519553 Q6AWC8 147 aa1.19□□□□□ -2.22
PTPN12-213ENST00000519553 CSAG1Q6PB30 78 aa1.19□□□□□ -2.22
PTPN12-213ENST00000519553 LYPD5Q6UWN5 251 aa1.19□□□□□ -2.22
PTPN12-213ENST00000519553 LINC00322Q6ZN03 302 aaPredicted RBP1.19□□□□□ -2.22
PTPN12-213ENST00000519553 NDUFA11Q86Y39 141 aa1.19□□□□□ -2.22
PTPN12-213ENST00000519553 PPP3R2Q96LZ3 170 aa1.19□□□□□ -2.22
PTPN12-213ENST00000519553 SNURFQ9Y675 71 aa1.19□□□□□ -2.22
PTPN12-213ENST00000519553 PTPRMP28827 1452 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 TMEM30CPA0ZSE6 113 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 C20orf202A1L168 122 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 NUPR2A6NF83 97 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 NDUFB6O95139 128 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 PPYP01298 95 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 GYPBP06028 91 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 PIRTP0C851 137 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 POLR2JP52435 117 aaKnown RBP1.18□□□□□ -2.22
PTPN12-213ENST00000519553 Q56UQ5 140 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 Q6ZS92 163 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 LSM10Q969L4 123 aaKnown RBP1.18□□□□□ -2.22
PTPN12-213ENST00000519553 LINC00526Q96FQ7 95 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 DMAC1Q96GE9 116 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 RPRMQ9NS64 109 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 COA4Q9NYJ1 87 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 TMEM14CQ9P0S9 112 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 NDUFA12Q9UI09 145 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 CUL7Q14999 1698 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 PTPRDP23468 1912 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 LAMB1P07942 1786 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 CCNB3Q8WWL7 1395 aa1.18□□□□□ -2.22
PTPN12-213ENST00000519553 KIAA0100Q14667 2235 aaKnown RBP1.17□□□□□ -2.22
PTPN12-213ENST00000519553 DAPK1P53355 1430 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 VPS8Q8N3P4 1428 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 MCRIP1C9JLW8 97 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 IL5P05113 134 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 SLC25A6P12236 298 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 RBP2P50120 134 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 PPP3R1P63098 170 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 SPRNQ5BIV9 151 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 GDF5OSQ5U4N7 250 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 DEFB132Q7Z7B7 95 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 PLPP5Q8NEB5 264 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 SPTSSAQ969W0 71 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 TMEM141Q96I45 108 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms