RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 TRBV7-9A0A0J9YWB2 115 aa7.6□□□□□ -1.19
TRAPPC9-203ENST00000517667 MAP1LC3B2A6NCE7 125 aa7.6□□□□□ -1.19
TRAPPC9-203ENST00000517667 OR10J3Q5JRS4 329 aa7.6□□□□□ -1.19
TRAPPC9-203ENST00000517667 PRR9Q5T870 116 aa7.6□□□□□ -1.19
TRAPPC9-203ENST00000517667 SCXQ7RTU7 201 aa7.6□□□□□ -1.19
TRAPPC9-203ENST00000517667 LYPD6BQ8NI32 183 aa7.6□□□□□ -1.19
TRAPPC9-203ENST00000517667 MAP1LC3BQ9GZQ8 125 aa7.6□□□□□ -1.19
TRAPPC9-203ENST00000517667 EIF5A2Q9GZV4 153 aaKnown RBP7.6□□□□□ -1.19
TRAPPC9-203ENST00000517667 TMEM14CQ9P0S9 112 aa7.6□□□□□ -1.19
TRAPPC9-203ENST00000517667 ZNF492Q9P255 531 aa7.6□□□□□ -1.19
TRAPPC9-203ENST00000517667 FAT3Q8TDW7 4589 aa7.59□□□□□ -1.19
TRAPPC9-203ENST00000517667 RS1O15537 224 aa7.59□□□□□ -1.19
TRAPPC9-203ENST00000517667 NDUFB4O95168 129 aa7.59□□□□□ -1.19
TRAPPC9-203ENST00000517667 KRTAP10-4P60372 401 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC9-203ENST00000517667 SUN5Q8TC36 379 aa7.59□□□□□ -1.19
TRAPPC9-203ENST00000517667 MBD3L1Q8WWY6 194 aa7.59□□□□□ -1.19
TRAPPC9-203ENST00000517667 FAM210AQ96ND0 272 aa7.59□□□□□ -1.19
TRAPPC9-203ENST00000517667 TREM1Q9NP99 234 aa7.59□□□□□ -1.19
TRAPPC9-203ENST00000517667 MANBALQ9NQG1 85 aa7.59□□□□□ -1.19
TRAPPC9-203ENST00000517667 TRGV11A0A075B6L2 103 aa7.58□□□□□ -1.2
TRAPPC9-203ENST00000517667 IGKV2-40A0A087WW87 121 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC9-203ENST00000517667 CXorf1O96002 111 aa7.58□□□□□ -1.2
TRAPPC9-203ENST00000517667 IGKV2D-40P01614 121 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC9-203ENST00000517667 PFN1P07737 140 aaKnown RBP7.58□□□□□ -1.2
TRAPPC9-203ENST00000517667 KHDC3LQ587J8 217 aa7.58□□□□□ -1.2
TRAPPC9-203ENST00000517667 MIC13Q5XKP0 118 aa7.58□□□□□ -1.2
TRAPPC9-203ENST00000517667 FAM122CQ6P4D5 195 aa7.58□□□□□ -1.2
TRAPPC9-203ENST00000517667 Q6ZQT7 251 aa7.58□□□□□ -1.2
TRAPPC9-203ENST00000517667 EXOC3-AS1Q8N2X6 119 aa7.58□□□□□ -1.2
TRAPPC9-203ENST00000517667 OR4C5Q8NGB2 326 aa7.58□□□□□ -1.2
TRAPPC9-203ENST00000517667 CHAC1Q9BUX1 264 aa7.58□□□□□ -1.2
TRAPPC9-203ENST00000517667 NDUFS6O75380 124 aaKnown RBP7.57□□□□□ -1.2
TRAPPC9-203ENST00000517667 ZNF138P52744 262 aa7.57□□□□□ -1.2
TRAPPC9-203ENST00000517667 FAM159AQ6UWV7 190 aa7.57□□□□□ -1.2
TRAPPC9-203ENST00000517667 PQLC2Q6ZP29 291 aa7.57□□□□□ -1.2
TRAPPC9-203ENST00000517667 TMEM167BQ9NRX6 74 aa7.57□□□□□ -1.2
TRAPPC9-203ENST00000517667 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 TRAV8-3A0A0A6YYJ7 113 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 LOC100131303A0A0U1RQF7 123 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 RBFOX3A6NFN3 312 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 IGHV3-30P01768 117 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 IGHV3-33P01772 117 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 IGHV3-30-3P0DP02 117 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 IGHV3-30-5P0DP03 117 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 FHITP49789 147 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 WFDC2Q14508 124 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 TMEM183BQ1AE95 376 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 MUC21Q5SSG8 566 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 LELP1Q5T871 98 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 TMEM183AQ8IXX5 376 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 RAB24Q969Q5 203 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 VAX2Q9UIW0 290 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 COX11Q9Y6N1 276 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 ARL2-SNX15V9GYD0 113 aa7.56□□□□□ -1.2
TRAPPC9-203ENST00000517667 IGLV2-8P01709 118 aa7.55□□□□□ -1.2
TRAPPC9-203ENST00000517667 PYYP10082 97 aa7.55□□□□□ -1.2
TRAPPC9-203ENST00000517667 GATA1P15976 413 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC9-203ENST00000517667 TOR2AQ5JU69 321 aa7.55□□□□□ -1.2
TRAPPC9-203ENST00000517667 Q6AWC8 147 aa7.55□□□□□ -1.2
TRAPPC9-203ENST00000517667 Q8TAT8 98 aa7.55□□□□□ -1.2
TRAPPC9-203ENST00000517667 GNG13Q9P2W3 67 aa7.55□□□□□ -1.2
TRAPPC9-203ENST00000517667 A0A1B0GV50 99 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 RBAKDNA6NC62 111 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 F8W036 122 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 M0R2P5 195 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 LECT2O14960 151 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 OR7C2O60412 319 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 STAG3L2P0CL84 134 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 STAG3L3P0CL85 134 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 BCL2P10415 239 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 ZNF506Q5JVG8 444 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 SVBPQ8N300 66 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 CIRBP-AS1Q8TBR5 109 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 PRADC1Q9BSG0 188 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 SEC11CQ9BY50 192 aa7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 NKX6-2Q9C056 277 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-203ENST00000517667 TMEM218A2RU14 115 aa7.53□□□□□ -1.2
TRAPPC9-203ENST00000517667 FBLL1A6NHQ2 334 aaKnown RBP7.53□□□□□ -1.2
TRAPPC9-203ENST00000517667 PDE6DO43924 150 aa7.53□□□□□ -1.2
TRAPPC9-203ENST00000517667 CIDEAO60543 219 aa7.53□□□□□ -1.2
TRAPPC9-203ENST00000517667 CSN1S1P47710 185 aa7.53□□□□□ -1.2
TRAPPC9-203ENST00000517667 RHOHQ15669 191 aa7.53□□□□□ -1.2
TRAPPC9-203ENST00000517667 LINC01620Q4KN68 170 aa7.53□□□□□ -1.2
TRAPPC9-203ENST00000517667 Q8N976 141 aa7.53□□□□□ -1.2
TRAPPC9-203ENST00000517667 ATP6V0E2Q8NHE4 81 aa7.53□□□□□ -1.2
TRAPPC9-203ENST00000517667 GTSF1LQ9H1H1 148 aa7.53□□□□□ -1.2
TRAPPC9-203ENST00000517667 LENEPQ9Y5L5 61 aa7.53□□□□□ -1.2
TRAPPC9-203ENST00000517667 IGHV3-16A0A0C4DH30 117 aa7.52□□□□□ -1.21
TRAPPC9-203ENST00000517667 TRBV6-4A0A1B0GX49 114 aa7.52□□□□□ -1.21
TRAPPC9-203ENST00000517667 F6UZH7 168 aa7.52□□□□□ -1.21
TRAPPC9-203ENST00000517667 TMEM250H0YL14 139 aa7.52□□□□□ -1.21
TRAPPC9-203ENST00000517667 HMGB3O15347 200 aaKnown RBP7.52□□□□□ -1.21
TRAPPC9-203ENST00000517667 SNAPINO95295 136 aa7.52□□□□□ -1.21
TRAPPC9-203ENST00000517667 IGLV2-11P01706 119 aa7.52□□□□□ -1.21
TRAPPC9-203ENST00000517667 NBEAP1P0C6P0 100 aa7.52□□□□□ -1.21
TRAPPC9-203ENST00000517667 ARL14EPLP0DKL9 152 aa7.52□□□□□ -1.21
TRAPPC9-203ENST00000517667 FGF8P55075 233 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC9-203ENST00000517667 MEF2BQ02080 365 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC9-203ENST00000517667 ZNF726P1Q15940 193 aa7.52□□□□□ -1.21
TRAPPC9-203ENST00000517667 SLC25A29Q8N8R3 303 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms