RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 IFNA1P01562 189 aa13.41□□□□□ -0.26
LMNA-225ENST00000515824 LINC00336Q6ZUF6 198 aa13.41□□□□□ -0.26
LMNA-225ENST00000515824 NHLRC2Q8NBF2 726 aa13.41□□□□□ -0.26
LMNA-225ENST00000515824 PCNPQ8WW12 178 aaKnown RBP13.41□□□□□ -0.26
LMNA-225ENST00000515824 UPK3BQ9BT76 320 aa13.41□□□□□ -0.26
LMNA-225ENST00000515824 MRPS16Q9Y3D3 137 aaKnown RBP13.41□□□□□ -0.26
LMNA-225ENST00000515824 RS1O15537 224 aa13.4□□□□□ -0.26
LMNA-225ENST00000515824 SOHLH1Q5JUK2 328 aa13.4□□□□□ -0.26
LMNA-225ENST00000515824 ZNF506Q5JVG8 444 aa13.4□□□□□ -0.26
LMNA-225ENST00000515824 DNLZQ5SXM8 178 aa13.4□□□□□ -0.26
LMNA-225ENST00000515824 IL36BQ9NZH7 164 aa13.4□□□□□ -0.26
LMNA-225ENST00000515824 DNAH17Q9UFH2 4485 aa13.39□□□□□ -0.27
LMNA-225ENST00000515824 NBDYA0A0U1RRE5 68 aa13.39□□□□□ -0.27
LMNA-225ENST00000515824 K7EQD1 137 aa13.39□□□□□ -0.27
LMNA-225ENST00000515824 GYPEP15421 78 aa13.39□□□□□ -0.27
LMNA-225ENST00000515824 RPL35P42766 123 aaKnown RBP13.39□□□□□ -0.27
LMNA-225ENST00000515824 PIK3CD-AS1Q5SR53 167 aa13.39□□□□□ -0.27
LMNA-225ENST00000515824 CFAP126Q5VTH2 177 aa13.39□□□□□ -0.27
LMNA-225ENST00000515824 NEGR1Q7Z3B1 354 aa13.39□□□□□ -0.27
LMNA-225ENST00000515824 MLST8Q9BVC4 326 aa13.39□□□□□ -0.27
LMNA-225ENST00000515824 FAT2Q9NYQ8 4349 aa13.39□□□□□ -0.27
LMNA-225ENST00000515824 GRIFINA4D1Z8 144 aa13.38□□□□□ -0.27
LMNA-225ENST00000515824 ARMS2P0C7Q2 107 aa13.38□□□□□ -0.27
LMNA-225ENST00000515824 GATA1P15976 413 aaPredicted RBP13.38□□□□□ -0.27
LMNA-225ENST00000515824 SRIP30626 198 aa13.38□□□□□ -0.27
LMNA-225ENST00000515824 LINC01559Q495D7 138 aa13.38□□□□□ -0.27
LMNA-225ENST00000515824 C11orf52Q96A22 123 aa13.38□□□□□ -0.27
LMNA-225ENST00000515824 TMSB15BA0A087X1C1 80 aa13.37□□□□□ -0.27
LMNA-225ENST00000515824 A8MWV9 139 aa13.37□□□□□ -0.27
LMNA-225ENST00000515824 H3BVH4 76 aa13.37□□□□□ -0.27
LMNA-225ENST00000515824 TAGLN2P37802 199 aaKnown RBP13.37□□□□□ -0.27
LMNA-225ENST00000515824 MEF2BQ02080 365 aaPredicted RBP13.37□□□□□ -0.27
LMNA-225ENST00000515824 C1orf134Q5TEV5 83 aa13.37□□□□□ -0.27
LMNA-225ENST00000515824 SYT8Q8NBV8 401 aa13.37□□□□□ -0.27
LMNA-225ENST00000515824 BIRC6Q9NR09 4857 aa13.37□□□□□ -0.27
LMNA-225ENST00000515824 RTL8CO15255 209 aa13.36□□□□□ -0.27
LMNA-225ENST00000515824 PDE6DO43924 150 aa13.36□□□□□ -0.27
LMNA-225ENST00000515824 BLOC1S1P78537 153 aa13.36□□□□□ -0.27
LMNA-225ENST00000515824 LYPD5Q6UWN5 251 aa13.36□□□□□ -0.27
LMNA-225ENST00000515824 ALKAL2Q6UX46 152 aa13.36□□□□□ -0.27
LMNA-225ENST00000515824 VAX2Q9UIW0 290 aa13.36□□□□□ -0.27
LMNA-225ENST00000515824 IGHV3-73A0A0B4J1V6 119 aa13.35□□□□□ -0.27
LMNA-225ENST00000515824 BCL2P10415 239 aa13.35□□□□□ -0.27
LMNA-225ENST00000515824 NKX2-5P52952 324 aaPredicted RBP13.35□□□□□ -0.27
LMNA-225ENST00000515824 TTC32Q5I0X7 151 aa13.35□□□□□ -0.27
LMNA-225ENST00000515824 PRR27Q6MZM9 219 aa13.35□□□□□ -0.27
LMNA-225ENST00000515824 PRADC1Q9BSG0 188 aa13.35□□□□□ -0.27
LMNA-225ENST00000515824 MED9Q9NWA0 146 aa13.35□□□□□ -0.27
LMNA-225ENST00000515824 PHLDA3Q9Y5J5 127 aa13.35□□□□□ -0.27
LMNA-225ENST00000515824 TRBV6-4A0A1B0GX49 114 aa13.34□□□□□ -0.27
LMNA-225ENST00000515824 DMRTA1Q5VZB9 504 aa13.34□□□□□ -0.27
LMNA-225ENST00000515824 SH2D6Q7Z4S9 175 aa13.34□□□□□ -0.27
LMNA-225ENST00000515824 ZNF575Q86XF7 245 aa13.34□□□□□ -0.27
LMNA-225ENST00000515824 SLC25A29Q8N8R3 303 aa13.34□□□□□ -0.27
LMNA-225ENST00000515824 DERL1Q9BUN8 251 aa13.34□□□□□ -0.27
LMNA-225ENST00000515824 PRSS29PA6NIE9 313 aa13.33□□□□□ -0.28
LMNA-225ENST00000515824 MGST1P10620 155 aaKnown RBP13.33□□□□□ -0.28
LMNA-225ENST00000515824 RHOHQ15669 191 aa13.33□□□□□ -0.28
LMNA-225ENST00000515824 ZFP2Q6ZN57 461 aa13.33□□□□□ -0.28
LMNA-225ENST00000515824 PARLQ9H300 379 aa13.33□□□□□ -0.28
LMNA-225ENST00000515824 SCRT2Q9NQ03 307 aa13.33□□□□□ -0.28
LMNA-225ENST00000515824 LOC100131303A0A0U1RQF7 123 aa13.32□□□□□ -0.28
LMNA-225ENST00000515824 A0A1W2PPQ1 181 aa13.32□□□□□ -0.28
LMNA-225ENST00000515824 SIVA1O15304 175 aa13.32□□□□□ -0.28
LMNA-225ENST00000515824 NXPH4O95158 308 aa13.32□□□□□ -0.28
LMNA-225ENST00000515824 CENPWQ5EE01 88 aa13.32□□□□□ -0.28
LMNA-225ENST00000515824 C6orf223Q8N319 242 aa13.32□□□□□ -0.28
LMNA-225ENST00000515824 BOLA1Q9Y3E2 137 aa13.32□□□□□ -0.28
LMNA-225ENST00000515824 RAB19A4D1S5 217 aa13.31□□□□□ -0.28
LMNA-225ENST00000515824 CXCL1P09341 107 aa13.31□□□□□ -0.28
LMNA-225ENST00000515824 MED14OSP0DP75 135 aa13.31□□□□□ -0.28
LMNA-225ENST00000515824 GNG4P50150 75 aa13.31□□□□□ -0.28
LMNA-225ENST00000515824 RPL19P84098 196 aaKnown RBP13.31□□□□□ -0.28
LMNA-225ENST00000515824 SMIM12Q96EX1 92 aa13.31□□□□□ -0.28
LMNA-225ENST00000515824 M0R381 172 aa13.3□□□□□ -0.28
LMNA-225ENST00000515824 ZFP82Q8N141 532 aa13.3□□□□□ -0.28
LMNA-225ENST00000515824 DAZAP1Q96EP5 407 aaKnown RBP13.3□□□□□ -0.28
LMNA-225ENST00000515824 JPT2Q9H910 190 aa13.3□□□□□ -0.28
LMNA-225ENST00000515824 HECTD4Q9Y4D8 3996 aa13.29□□□□□ -0.28
LMNA-225ENST00000515824 RHODO00212 210 aa13.29□□□□□ -0.28
LMNA-225ENST00000515824 IGLV2-8P01709 118 aa13.28□□□□□ -0.28
LMNA-225ENST00000515824 LYPD6BQ8NI32 183 aa13.28□□□□□ -0.28
LMNA-225ENST00000515824 SFRP2Q96HF1 295 aa13.28□□□□□ -0.28
LMNA-225ENST00000515824 SAMD10Q9BYL1 202 aa13.28□□□□□ -0.28
LMNA-225ENST00000515824 BIN3Q9NQY0 253 aa13.28□□□□□ -0.28
LMNA-225ENST00000515824 RBFOX3A6NFN3 312 aa13.27□□□□□ -0.29
LMNA-225ENST00000515824 BTF3P20290 206 aaKnown RBP13.27□□□□□ -0.29
LMNA-225ENST00000515824 FAM74A4Q5TZK3 123 aa13.27□□□□□ -0.29
LMNA-225ENST00000515824 UFSP1Q6NVU6 142 aa13.27□□□□□ -0.29
LMNA-225ENST00000515824 Q6ZSN1 163 aa13.27□□□□□ -0.29
LMNA-225ENST00000515824 TRAV9-2A0A087WT02 112 aa13.26□□□□□ -0.29
LMNA-225ENST00000515824 TIRAPP58753 221 aa13.26□□□□□ -0.29
LMNA-225ENST00000515824 SSBP4Q9BWG4 385 aaPredicted RBP13.26□□□□□ -0.29
LMNA-225ENST00000515824 KRTAP1-5Q9BYS1 174 aa13.26□□□□□ -0.29
LMNA-225ENST00000515824 A0A087WWL8 130 aa13.25□□□□□ -0.29
LMNA-225ENST00000515824 SNAI2O43623 268 aa13.25□□□□□ -0.29
LMNA-225ENST00000515824 OR5AL1P0C617 328 aa13.25□□□□□ -0.29
LMNA-225ENST00000515824 RPS20P60866 119 aaKnown RBP13.25□□□□□ -0.29
LMNA-225ENST00000515824 LY96Q9Y6Y9 160 aa13.25□□□□□ -0.29
LMNA-225ENST00000515824 TRBV20OR9-2A0A075B6H5 130 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms