RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SLC25A29Q8N8R3 303 aa9.29□□□□□ -0.92
TCOF1-215ENST00000515516 TNFRSF18Q9Y5U5 241 aa9.29□□□□□ -0.92
TCOF1-215ENST00000515516 MAP1LC3B2A6NCE7 125 aa9.28□□□□□ -0.92
TCOF1-215ENST00000515516 PGPEP1LA6NFU8 196 aa9.28□□□□□ -0.92
TCOF1-215ENST00000515516 FAM74A7A6NL05 159 aa9.28□□□□□ -0.92
TCOF1-215ENST00000515516 MGST1P10620 155 aaKnown RBP9.28□□□□□ -0.92
TCOF1-215ENST00000515516 ASIPP42127 132 aa9.28□□□□□ -0.92
TCOF1-215ENST00000515516 LGALSLQ3ZCW2 172 aaPredicted RBP9.28□□□□□ -0.92
TCOF1-215ENST00000515516 OR10J3Q5JRS4 329 aa9.28□□□□□ -0.92
TCOF1-215ENST00000515516 MAP1LC3BQ9GZQ8 125 aa9.28□□□□□ -0.92
TCOF1-215ENST00000515516 IGHV3-38A0A0C4DH36 116 aa9.27□□□□□ -0.93
TCOF1-215ENST00000515516 A8MWV9 139 aa9.27□□□□□ -0.93
TCOF1-215ENST00000515516 B4DEV8 164 aa9.27□□□□□ -0.93
TCOF1-215ENST00000515516 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
TCOF1-215ENST00000515516 UBE2G1P62253 170 aa9.27□□□□□ -0.93
TCOF1-215ENST00000515516 DPPA3Q6W0C5 159 aa9.27□□□□□ -0.93
TCOF1-215ENST00000515516 ZFP30Q9Y2G7 519 aa9.27□□□□□ -0.93
TCOF1-215ENST00000515516 IGKV3D-20A0A0C4DH25 116 aa9.26□□□□□ -0.93
TCOF1-215ENST00000515516 PSCAO43653 123 aa9.26□□□□□ -0.93
TCOF1-215ENST00000515516 CST9LP1Q5W188 147 aa9.26□□□□□ -0.93
TCOF1-215ENST00000515516 CDPF1Q6NVV7 123 aa9.26□□□□□ -0.93
TCOF1-215ENST00000515516 Q86TA4 180 aa9.26□□□□□ -0.93
TCOF1-215ENST00000515516 SYT8Q8NBV8 401 aa9.26□□□□□ -0.93
TCOF1-215ENST00000515516 ATP6V0E2Q8NHE4 81 aa9.26□□□□□ -0.93
TCOF1-215ENST00000515516 FMC1Q96HJ9 113 aa9.26□□□□□ -0.93
TCOF1-215ENST00000515516 TCEAL7Q9BRU2 100 aa9.26□□□□□ -0.93
TCOF1-215ENST00000515516 CYTL1Q9NRR1 136 aa9.26□□□□□ -0.93
TCOF1-215ENST00000515516 A0A087WTM6 91 aa9.25□□□□□ -0.93
TCOF1-215ENST00000515516 G3V3Q6 166 aa9.25□□□□□ -0.93
TCOF1-215ENST00000515516 PIK3CD-AS1Q5SR53 167 aa9.25□□□□□ -0.93
TCOF1-215ENST00000515516 FAM162BQ5T6X4 162 aa9.25□□□□□ -0.93
TCOF1-215ENST00000515516 ZFP2Q6ZN57 461 aa9.25□□□□□ -0.93
TCOF1-215ENST00000515516 GTSF1LQ9H1H1 148 aa9.25□□□□□ -0.93
TCOF1-215ENST00000515516 SMLR1H3BR10 107 aa9.24□□□□□ -0.93
TCOF1-215ENST00000515516 FHITP49789 147 aa9.24□□□□□ -0.93
TCOF1-215ENST00000515516 LINC01556Q5JQF7 62 aa9.24□□□□□ -0.93
TCOF1-215ENST00000515516 LELP1Q5T871 98 aa9.24□□□□□ -0.93
TCOF1-215ENST00000515516 PARLQ9H300 379 aa9.24□□□□□ -0.93
TCOF1-215ENST00000515516 IL36BQ9NZH7 164 aa9.24□□□□□ -0.93
TCOF1-215ENST00000515516 LRP1BQ9NZR2 4599 aa9.24□□□□□ -0.93
TCOF1-215ENST00000515516 RYR1P21817 5038 aa9.23□□□□□ -0.93
TCOF1-215ENST00000515516 KRBOX1C9JBD0 128 aa9.23□□□□□ -0.93
TCOF1-215ENST00000515516 H3BVH4 76 aa9.23□□□□□ -0.93
TCOF1-215ENST00000515516 M0R036 132 aa9.23□□□□□ -0.93
TCOF1-215ENST00000515516 SH2D1AO60880 128 aa9.23□□□□□ -0.93
TCOF1-215ENST00000515516 AKR1C3P42330 323 aa9.23□□□□□ -0.93
TCOF1-215ENST00000515516 Q8N1X5 172 aa9.23□□□□□ -0.93
TCOF1-215ENST00000515516 KCNRGQ8N5I3 272 aa9.23□□□□□ -0.93
TCOF1-215ENST00000515516 OR11H4Q8NGC9 324 aa9.23□□□□□ -0.93
TCOF1-215ENST00000515516 ZC2HC1AQ96GY0 325 aa9.23□□□□□ -0.93
TCOF1-215ENST00000515516 KRTAP4-5Q9BYR2 181 aa9.23□□□□□ -0.93
TCOF1-215ENST00000515516 SCRT2Q9NQ03 307 aa9.23□□□□□ -0.93
TCOF1-215ENST00000515516 PCLOQ9Y6V0 5065 aa9.23□□□□□ -0.93
TCOF1-215ENST00000515516 A0A0D9SG52 128 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 TRBV6-1A0A0K0K1D8 114 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 KANTRA0A1W2PQU2 76 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 GAGE12JA6NER3 117 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 IBA57-AS1B1ANH7 110 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 UMAD1C9J7I0 102 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 IGHV3-30P01768 117 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 IGHV3-33P01772 117 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 ARMS2P0C7Q2 107 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 SEC11BP0C7V7 166 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 IGHV3-30-3P0DP02 117 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 IGHV3-30-5P0DP03 117 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 TPT1P13693 172 aaKnown RBP9.22□□□□□ -0.93
TCOF1-215ENST00000515516 GAGE1Q13065 139 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 GAGE4Q13068 117 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 GAGE5Q13069 117 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 ZNF345Q14585 488 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 GAGE13Q4V321 117 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 FAM213BQ8TBF2 198 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 SFT2D1Q8WV19 159 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 PHLDA3Q9Y5J5 127 aa9.22□□□□□ -0.93
TCOF1-215ENST00000515516 HSPG2P98160 4391 aa9.21□□□□□ -0.93
TCOF1-215ENST00000515516 GRIFINA4D1Z8 144 aa9.21□□□□□ -0.94
TCOF1-215ENST00000515516 RHODO00212 210 aa9.21□□□□□ -0.94
TCOF1-215ENST00000515516 PAGE4O60829 102 aa9.21□□□□□ -0.94
TCOF1-215ENST00000515516 PFDN1O60925 122 aa9.21□□□□□ -0.94
TCOF1-215ENST00000515516 S100A9P06702 114 aaKnown RBP9.21□□□□□ -0.94
TCOF1-215ENST00000515516 FUSP35637 526 aaKnown RBP eCLIP9.21□□□□□ -0.94
TCOF1-215ENST00000515516 CRIP1P50238 77 aa9.21□□□□□ -0.94
TCOF1-215ENST00000515516 EIF5AP63241 154 aaKnown RBP9.21□□□□□ -0.94
TCOF1-215ENST00000515516 DNLZQ5SXM8 178 aa9.21□□□□□ -0.94
TCOF1-215ENST00000515516 DMRTA1Q5VZB9 504 aa9.21□□□□□ -0.94
TCOF1-215ENST00000515516 Q6ZSN1 163 aa9.21□□□□□ -0.94
TCOF1-215ENST00000515516 COX8CQ7Z4L0 72 aa9.21□□□□□ -0.94
TCOF1-215ENST00000515516 ZNF471Q9BX82 626 aaPredicted RBP9.21□□□□□ -0.94
TCOF1-215ENST00000515516 Q9HAA7 133 aa9.21□□□□□ -0.94
TCOF1-215ENST00000515516 TMSB15BA0A087X1C1 80 aa9.2□□□□□ -0.94
TCOF1-215ENST00000515516 HMSDA8MTL9 139 aa9.2□□□□□ -0.94
TCOF1-215ENST00000515516 LTAP01374 205 aa9.2□□□□□ -0.94
TCOF1-215ENST00000515516 ZNF674Q2M3X9 581 aa9.2□□□□□ -0.94
TCOF1-215ENST00000515516 A0A087WWC5 75 aa9.19□□□□□ -0.94
TCOF1-215ENST00000515516 A0A1B0GV50 99 aa9.19□□□□□ -0.94
TCOF1-215ENST00000515516 M0R381 172 aa9.19□□□□□ -0.94
TCOF1-215ENST00000515516 BCL2L11O43521 198 aa9.19□□□□□ -0.94
TCOF1-215ENST00000515516 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
TCOF1-215ENST00000515516 FAM74A4Q5TZK3 123 aa9.19□□□□□ -0.94
TCOF1-215ENST00000515516 ZFP82Q8N141 532 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms