RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 AMELXQ99217 191 aa9.76□□□□□ -0.85
SMAD1-215ENST00000515385 S4R3C0 116 aa9.76□□□□□ -0.85
SMAD1-215ENST00000515385 PLXNB1O43157 2135 aa9.76□□□□□ -0.85
SMAD1-215ENST00000515385 IGIPA6NJ69 53 aa9.75□□□□□ -0.85
SMAD1-215ENST00000515385 CTSGP08311 255 aa9.75□□□□□ -0.85
SMAD1-215ENST00000515385 TMEM170BQ5T4T1 132 aa9.75□□□□□ -0.85
SMAD1-215ENST00000515385 C2orf82Q6UX34 121 aa9.75□□□□□ -0.85
SMAD1-215ENST00000515385 CACNA1GO43497 2377 aa9.75□□□□□ -0.85
SMAD1-215ENST00000515385 SPTBN5Q9NRC6 3674 aaKnown RBP9.75□□□□□ -0.85
SMAD1-215ENST00000515385 RNF223E7ERA6 249 aa9.75□□□□□ -0.85
SMAD1-215ENST00000515385 LEPROTO15243 131 aa9.75□□□□□ -0.85
SMAD1-215ENST00000515385 Q1RN00 199 aa9.75□□□□□ -0.85
SMAD1-215ENST00000515385 A0A0J9YX75 114 aa9.74□□□□□ -0.85
SMAD1-215ENST00000515385 TSPEAR-AS2P59090 65 aa9.74□□□□□ -0.85
SMAD1-215ENST00000515385 TCF15Q12870 199 aa9.74□□□□□ -0.85
SMAD1-215ENST00000515385 IGFL2Q6UWQ7 119 aa9.74□□□□□ -0.85
SMAD1-215ENST00000515385 POM121L12Q8N7R1 296 aa9.74□□□□□ -0.85
SMAD1-215ENST00000515385 KIR2DL5BQ8NHK3 375 aa9.74□□□□□ -0.85
SMAD1-215ENST00000515385 RPL39LQ96EH5 51 aaKnown RBP9.74□□□□□ -0.85
SMAD1-215ENST00000515385 LOC107984640A0A0U1RRK4 108 aa9.73□□□□□ -0.85
SMAD1-215ENST00000515385 BUB3O43684 328 aa9.73□□□□□ -0.85
SMAD1-215ENST00000515385 ACYP1P07311 99 aa9.73□□□□□ -0.85
SMAD1-215ENST00000515385 DLX1P56177 255 aa9.73□□□□□ -0.85
SMAD1-215ENST00000515385 ATP1A1-AS1Q5TC04 95 aa9.73□□□□□ -0.85
SMAD1-215ENST00000515385 MSRB2Q9Y3D2 182 aa9.73□□□□□ -0.85
SMAD1-215ENST00000515385 MED13Q9UHV7 2174 aa9.73□□□□□ -0.85
SMAD1-215ENST00000515385 TSHBP01222 138 aa9.73□□□□□ -0.85
SMAD1-215ENST00000515385 IGHV4-39P01824 125 aa9.73□□□□□ -0.85
SMAD1-215ENST00000515385 COX6CP09669 75 aa9.73□□□□□ -0.85
SMAD1-215ENST00000515385 ZNF56Q15929 161 aa9.73□□□□□ -0.85
SMAD1-215ENST00000515385 ZNF876PQ49A33 203 aa9.73□□□□□ -0.85
SMAD1-215ENST00000515385 C3orf22Q8N5N4 141 aa9.73□□□□□ -0.85
SMAD1-215ENST00000515385 SDHAF1A6NFY7 115 aa9.72□□□□□ -0.85
SMAD1-215ENST00000515385 UQCRQO14949 82 aa9.72□□□□□ -0.85
SMAD1-215ENST00000515385 ATP5G1P05496 136 aa9.72□□□□□ -0.85
SMAD1-215ENST00000515385 EMP1P54849 157 aa9.72□□□□□ -0.85
SMAD1-215ENST00000515385 EBI3Q14213 229 aa9.72□□□□□ -0.85
SMAD1-215ENST00000515385 MUSTN1Q8IVN3 82 aa9.72□□□□□ -0.85
SMAD1-215ENST00000515385 RNF182Q8N6D2 247 aa9.72□□□□□ -0.85
SMAD1-215ENST00000515385 CHCHD5Q9BSY4 110 aa9.72□□□□□ -0.85
SMAD1-215ENST00000515385 TP53TG1Q9Y2A0 90 aa9.72□□□□□ -0.85
SMAD1-215ENST00000515385 SVILO95425 2214 aa9.72□□□□□ -0.85
SMAD1-215ENST00000515385 EIF4EBP3O60516 100 aaPredicted RBP9.71□□□□□ -0.85
SMAD1-215ENST00000515385 COX7A1P24310 79 aa9.71□□□□□ -0.85
SMAD1-215ENST00000515385 IGHV4OR15-8A0A075B7B6 117 aa9.71□□□□□ -0.86
SMAD1-215ENST00000515385 A0A087WW49 117 aa9.71□□□□□ -0.86
SMAD1-215ENST00000515385 HERVK_113P63121 156 aa9.71□□□□□ -0.86
SMAD1-215ENST00000515385 C9orf153Q5TBE3 101 aa9.71□□□□□ -0.86
SMAD1-215ENST00000515385 GPHB5Q86YW7 130 aa9.71□□□□□ -0.86
SMAD1-215ENST00000515385 LINC00526Q96FQ7 95 aa9.71□□□□□ -0.86
SMAD1-215ENST00000515385 PHLDA3Q9Y5J5 127 aa9.71□□□□□ -0.86
SMAD1-215ENST00000515385 TRAV21A0A0B4J279 112 aa9.7□□□□□ -0.86
SMAD1-215ENST00000515385 H7C2G1 150 aa9.7□□□□□ -0.86
SMAD1-215ENST00000515385 VCYO14598 125 aa9.7□□□□□ -0.86
SMAD1-215ENST00000515385 MGPP08493 103 aa9.7□□□□□ -0.86
SMAD1-215ENST00000515385 S100A4P26447 101 aaKnown RBP9.7□□□□□ -0.86
SMAD1-215ENST00000515385 C14orf178Q8N769 122 aaPredicted RBP9.7□□□□□ -0.86
SMAD1-215ENST00000515385 WDR87Q6ZQQ6 2873 aa9.7□□□□□ -0.86
SMAD1-215ENST00000515385 MYO15AQ9UKN7 3530 aa9.7□□□□□ -0.86
SMAD1-215ENST00000515385 H7C423 109 aa9.7□□□□□ -0.86
SMAD1-215ENST00000515385 TRIAP1O43715 76 aa9.7□□□□□ -0.86
SMAD1-215ENST00000515385 DPM3Q9P2X0 92 aa9.7□□□□□ -0.86
SMAD1-215ENST00000515385 TMEM223A0PJW6 202 aa9.69□□□□□ -0.86
SMAD1-215ENST00000515385 FDCSPQ8NFU4 85 aa9.69□□□□□ -0.86
SMAD1-215ENST00000515385 ZFAND3Q9H8U3 227 aa9.69□□□□□ -0.86
SMAD1-215ENST00000515385 IGHV1-69P01742 117 aa9.68□□□□□ -0.86
SMAD1-215ENST00000515385 IGHV3-23P01764 117 aa9.68□□□□□ -0.86
SMAD1-215ENST00000515385 ELANEP08246 267 aa9.68□□□□□ -0.86
SMAD1-215ENST00000515385 LINC00477Q96M19 166 aa9.68□□□□□ -0.86
SMAD1-215ENST00000515385 CFAP54Q96N23 3096 aa9.68□□□□□ -0.86
SMAD1-215ENST00000515385 POLR2KP53803 58 aaKnown RBP9.68□□□□□ -0.86
SMAD1-215ENST00000515385 FAM27E3Q08E93 113 aa9.68□□□□□ -0.86
SMAD1-215ENST00000515385 DEFB123Q8N688 67 aa9.68□□□□□ -0.86
SMAD1-215ENST00000515385 DUX3Q96PT4 197 aa9.68□□□□□ -0.86
SMAD1-215ENST00000515385 ICOSQ9Y6W8 199 aa9.68□□□□□ -0.86
SMAD1-215ENST00000515385 CD3EP07766 207 aa9.67□□□□□ -0.86
SMAD1-215ENST00000515385 RNASE6Q93091 150 aaKnown RBP9.67□□□□□ -0.86
SMAD1-215ENST00000515385 FAM215AQ9Y5M1 114 aa9.67□□□□□ -0.86
SMAD1-215ENST00000515385 KLK9Q2XQG4 91 aa9.67□□□□□ -0.86
SMAD1-215ENST00000515385 METTL26Q96S19 204 aa9.67□□□□□ -0.86
SMAD1-215ENST00000515385 PIMREGQ9BSJ6 248 aa9.67□□□□□ -0.86
SMAD1-215ENST00000515385 KLK9Q9UKQ9 250 aa9.67□□□□□ -0.86
SMAD1-215ENST00000515385 WDFY3Q8IZQ1 3526 aa9.66□□□□□ -0.86
SMAD1-215ENST00000515385 NXPH4O95158 308 aa9.66□□□□□ -0.86
SMAD1-215ENST00000515385 C22orf34Q6ZV56 151 aa9.66□□□□□ -0.86
SMAD1-215ENST00000515385 DYNLRB1Q9NP97 96 aa9.66□□□□□ -0.86
SMAD1-215ENST00000515385 BEX4Q9NWD9 120 aaPredicted RBP9.66□□□□□ -0.86
SMAD1-215ENST00000515385 MALRD1Q5VYJ5 2156 aa9.66□□□□□ -0.86
SMAD1-215ENST00000515385 FAM236AA0A1B0GUQ0 79 aa9.65□□□□□ -0.86
SMAD1-215ENST00000515385 FAM236BA0A1B0GV22 79 aa9.65□□□□□ -0.86
SMAD1-215ENST00000515385 LST1O00453 97 aa9.65□□□□□ -0.86
SMAD1-215ENST00000515385 C9orf139Q6ZV77 190 aa9.65□□□□□ -0.86
SMAD1-215ENST00000515385 ZNF256Q9Y2P7 627 aaPredicted RBP9.65□□□□□ -0.86
SMAD1-215ENST00000515385 LINC00643Q86TS7 51 aa9.65□□□□□ -0.87
SMAD1-215ENST00000515385 TRGV11A0A075B6L2 103 aa9.64□□□□□ -0.87
SMAD1-215ENST00000515385 A0A0G2JNJ9 132 aa9.64□□□□□ -0.87
SMAD1-215ENST00000515385 A0A0J9YXY3 114 aa9.64□□□□□ -0.87
SMAD1-215ENST00000515385 TRBV6-5A0A0K0K1A5 114 aa9.64□□□□□ -0.87
SMAD1-215ENST00000515385 CLPSL1A2RUU4 121 aa9.64□□□□□ -0.87
SMAD1-215ENST00000515385 OOSP1A8MZH6 123 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms