RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 VSIG2Q96IQ7 327 aa9.74□□□□□ -0.85
USP46-209ENST00000514536 HHLA3Q9XRX5 114 aa9.74□□□□□ -0.85
USP46-209ENST00000514536 ALMS1Q8TCU4 4167 aa9.74□□□□□ -0.85
USP46-209ENST00000514536 TRAV4A0A0B4J268 109 aa9.73□□□□□ -0.85
USP46-209ENST00000514536 H3BVH4 76 aa9.73□□□□□ -0.85
USP46-209ENST00000514536 PAX4O43316 350 aa9.73□□□□□ -0.85
USP46-209ENST00000514536 TOR2AQ5JU69 321 aa9.73□□□□□ -0.85
USP46-209ENST00000514536 DNLZQ5SXM8 178 aa9.73□□□□□ -0.85
USP46-209ENST00000514536 UBE2DNLQ8IWF7 75 aa9.73□□□□□ -0.85
USP46-209ENST00000514536 PTH2Q96A98 100 aa9.73□□□□□ -0.85
USP46-209ENST00000514536 EIF5A2Q9GZV4 153 aaKnown RBP9.73□□□□□ -0.85
USP46-209ENST00000514536 IL36BQ9NZH7 164 aa9.73□□□□□ -0.85
USP46-209ENST00000514536 TRBV20OR9-2A0A075B6H5 130 aa9.72□□□□□ -0.85
USP46-209ENST00000514536 H3BNG1 76 aa9.72□□□□□ -0.85
USP46-209ENST00000514536 ARMS2P0C7Q2 107 aa9.72□□□□□ -0.85
USP46-209ENST00000514536 RPL19P84098 196 aaKnown RBP9.72□□□□□ -0.85
USP46-209ENST00000514536 PRO0255Q9UI72 69 aa9.72□□□□□ -0.85
USP46-209ENST00000514536 CRYBA4P53673 196 aa9.71□□□□□ -0.85
USP46-209ENST00000514536 SLAQ13239 276 aa9.71□□□□□ -0.85
USP46-209ENST00000514536 MUC4Q99102 2169 aa9.71□□□□□ -0.85
USP46-209ENST00000514536 TMEM250H0YL14 139 aa9.71□□□□□ -0.86
USP46-209ENST00000514536 RS1O15537 224 aa9.71□□□□□ -0.86
USP46-209ENST00000514536 RNF212Q495C1 297 aa9.71□□□□□ -0.86
USP46-209ENST00000514536 CFAP126Q5VTH2 177 aa9.71□□□□□ -0.86
USP46-209ENST00000514536 DAZAP1Q96EP5 407 aaKnown RBP9.71□□□□□ -0.86
USP46-209ENST00000514536 SMIM12Q96EX1 92 aa9.71□□□□□ -0.86
USP46-209ENST00000514536 FAM210AQ96ND0 272 aa9.71□□□□□ -0.86
USP46-209ENST00000514536 CEBPGP53567 150 aa9.7□□□□□ -0.86
USP46-209ENST00000514536 DMRTA1Q5VZB9 504 aa9.7□□□□□ -0.86
USP46-209ENST00000514536 PARLQ9H300 379 aa9.7□□□□□ -0.86
USP46-209ENST00000514536 PHLDA3Q9Y5J5 127 aa9.7□□□□□ -0.86
USP46-209ENST00000514536 A0A096LPF7 62 aa9.69□□□□□ -0.86
USP46-209ENST00000514536 IGHV3-73A0A0B4J1V6 119 aa9.69□□□□□ -0.86
USP46-209ENST00000514536 CCL18P55774 89 aa9.69□□□□□ -0.86
USP46-209ENST00000514536 OCC1Q8TAD7 63 aa9.69□□□□□ -0.86
USP46-209ENST00000514536 SCRT2Q9NQ03 307 aa9.69□□□□□ -0.86
USP46-209ENST00000514536 C19orf71A6NCJ1 209 aa9.68□□□□□ -0.86
USP46-209ENST00000514536 PIK3CD-AS1Q5SR53 167 aa9.68□□□□□ -0.86
USP46-209ENST00000514536 SYT8Q8NBV8 401 aa9.68□□□□□ -0.86
USP46-209ENST00000514536 JPT2Q9H910 190 aa9.68□□□□□ -0.86
USP46-209ENST00000514536 BIN3Q9NQY0 253 aa9.68□□□□□ -0.86
USP46-209ENST00000514536 LINC00588Q9Y4M8 146 aa9.68□□□□□ -0.86
USP46-209ENST00000514536 ICOSQ9Y6W8 199 aa9.68□□□□□ -0.86
USP46-209ENST00000514536 A8MWV9 139 aa9.67□□□□□ -0.86
USP46-209ENST00000514536 M0R381 172 aa9.67□□□□□ -0.86
USP46-209ENST00000514536 SRP19P09132 144 aaKnown RBP9.67□□□□□ -0.86
USP46-209ENST00000514536 CXCL1P09341 107 aa9.67□□□□□ -0.86
USP46-209ENST00000514536 ESRGQ1W209 222 aa9.67□□□□□ -0.86
USP46-209ENST00000514536 OR2D3Q8NGH3 330 aa9.67□□□□□ -0.86
USP46-209ENST00000514536 CIDEAO60543 219 aa9.67□□□□□ -0.86
USP46-209ENST00000514536 NDUFS6O75380 124 aaKnown RBP9.67□□□□□ -0.86
USP46-209ENST00000514536 P01737 135 aa9.67□□□□□ -0.86
USP46-209ENST00000514536 MED14OSP0DP75 135 aa9.67□□□□□ -0.86
USP46-209ENST00000514536 GYPEP15421 78 aa9.67□□□□□ -0.86
USP46-209ENST00000514536 GATA1P15976 413 aaPredicted RBP9.67□□□□□ -0.86
USP46-209ENST00000514536 MRPL23Q16540 153 aaKnown RBP9.67□□□□□ -0.86
USP46-209ENST00000514536 SAMD10Q9BYL1 202 aa9.67□□□□□ -0.86
USP46-209ENST00000514536 IGLV2-18A0A075B6J9 118 aa9.66□□□□□ -0.86
USP46-209ENST00000514536 MUC21A0A0G2JKD1 596 aa9.66□□□□□ -0.86
USP46-209ENST00000514536 MUC21A0A140T8X8 626 aa9.66□□□□□ -0.86
USP46-209ENST00000514536 K7EN84 100 aa9.66□□□□□ -0.86
USP46-209ENST00000514536 M0R2N4 97 aa9.66□□□□□ -0.86
USP46-209ENST00000514536 GZMBP10144 247 aa9.66□□□□□ -0.86
USP46-209ENST00000514536 ZFP82Q8N141 532 aa9.66□□□□□ -0.86
USP46-209ENST00000514536 NUDT10Q8NFP7 164 aa9.66□□□□□ -0.86
USP46-209ENST00000514536 NUDT11Q96G61 164 aa9.66□□□□□ -0.86
USP46-209ENST00000514536 NACAE9PAV3 2078 aa9.65□□□□□ -0.86
USP46-209ENST00000514536 LOC100131303A0A0U1RQF7 123 aa9.65□□□□□ -0.86
USP46-209ENST00000514536 K7EQD1 137 aa9.65□□□□□ -0.86
USP46-209ENST00000514536 SNAI2O43623 268 aa9.65□□□□□ -0.86
USP46-209ENST00000514536 FAM3BP58499 235 aaPredicted RBP9.65□□□□□ -0.86
USP46-209ENST00000514536 RPS20P60866 119 aaKnown RBP9.65□□□□□ -0.86
USP46-209ENST00000514536 SSTP61278 116 aa9.65□□□□□ -0.86
USP46-209ENST00000514536 SLC25A29Q8N8R3 303 aa9.65□□□□□ -0.86
USP46-209ENST00000514536 OR10AG1Q8NH19 301 aa9.65□□□□□ -0.86
USP46-209ENST00000514536 SFRP2Q96HF1 295 aa9.65□□□□□ -0.86
USP46-209ENST00000514536 SMIM7Q9BQ49 75 aa9.65□□□□□ -0.86
USP46-209ENST00000514536 SSBP4Q9BWG4 385 aaPredicted RBP9.65□□□□□ -0.86
USP46-209ENST00000514536 VPS13DQ5THJ4 4388 aa9.64□□□□□ -0.87
USP46-209ENST00000514536 A0A087WWL8 130 aa9.64□□□□□ -0.87
USP46-209ENST00000514536 OR5AL1P0C617 328 aa9.64□□□□□ -0.87
USP46-209ENST00000514536 SRSF3P84103 164 aaKnown RBP9.64□□□□□ -0.87
USP46-209ENST00000514536 ZFP2Q6ZN57 461 aa9.64□□□□□ -0.87
USP46-209ENST00000514536 Q6ZSN1 163 aa9.64□□□□□ -0.87
USP46-209ENST00000514536 ZNRF2Q8NHG8 242 aa9.64□□□□□ -0.87
USP46-209ENST00000514536 RNASE7Q9H1E1 156 aaKnown RBP9.64□□□□□ -0.87
USP46-209ENST00000514536 TRBV6-4A0A1B0GX49 114 aa9.63□□□□□ -0.87
USP46-209ENST00000514536 ZNF727A8MUV8 499 aa9.63□□□□□ -0.87
USP46-209ENST00000514536 C9JQL5 133 aa9.63□□□□□ -0.87
USP46-209ENST00000514536 SRIP30626 198 aa9.63□□□□□ -0.87
USP46-209ENST00000514536 PEA15Q15121 130 aa9.63□□□□□ -0.87
USP46-209ENST00000514536 FAM74A4Q5TZK3 123 aa9.63□□□□□ -0.87
USP46-209ENST00000514536 SPANXN1Q5VSR9 72 aa9.63□□□□□ -0.87
USP46-209ENST00000514536 UFSP1Q6NVU6 142 aa9.63□□□□□ -0.87
USP46-209ENST00000514536 NEGR1Q7Z3B1 354 aa9.63□□□□□ -0.87
USP46-209ENST00000514536 PRADC1Q9BSG0 188 aa9.63□□□□□ -0.87
USP46-209ENST00000514536 TPPP3Q9BW30 176 aa9.63□□□□□ -0.87
USP46-209ENST00000514536 XKRY2A2RUG3 117 aa9.63□□□□□ -0.87
USP46-209ENST00000514536 CRYGDP07320 174 aa9.63□□□□□ -0.87
USP46-209ENST00000514536 LYPD5Q6UWN5 251 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms