RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 XIRP2A4UGR9 3374 aa5.36□□□□□ -1.55
NIPBL-208ENST00000514335 IGKV1-5P01602 117 aa5.36□□□□□ -1.55
NIPBL-208ENST00000514335 CRIP3Q6Q6R5 217 aa5.36□□□□□ -1.55
NIPBL-208ENST00000514335 TRBV5-5A0A0J9YX44 114 aa5.35□□□□□ -1.55
NIPBL-208ENST00000514335 TRBV10-2A0A0K0K1G8 114 aa5.35□□□□□ -1.55
NIPBL-208ENST00000514335 NXPH4O95158 308 aa5.35□□□□□ -1.55
NIPBL-208ENST00000514335 ADIGQ0VDE8 80 aa5.35□□□□□ -1.55
NIPBL-208ENST00000514335 OPRPNQ99935 248 aaPredicted RBP5.35□□□□□ -1.55
NIPBL-208ENST00000514335 DKK2Q9UBU2 259 aa5.35□□□□□ -1.55
NIPBL-208ENST00000514335 ARHGAP32A7KAX9 2087 aa5.35□□□□□ -1.55
NIPBL-208ENST00000514335 C6orf99Q4VX62 202 aa5.35□□□□□ -1.55
NIPBL-208ENST00000514335 SLC25A29Q8N8R3 303 aa5.35□□□□□ -1.55
NIPBL-208ENST00000514335 NKAPP1Q8N9T2 125 aa5.35□□□□□ -1.55
NIPBL-208ENST00000514335 ZNF414Q96IQ9 312 aa5.35□□□□□ -1.55
NIPBL-208ENST00000514335 C18orf12Q96KH6 178 aa5.35□□□□□ -1.55
NIPBL-208ENST00000514335 MYO7BQ6PIF6 2116 aa5.35□□□□□ -1.55
NIPBL-208ENST00000514335 TMEM30CPA0ZSE6 113 aa5.34□□□□□ -1.55
NIPBL-208ENST00000514335 GLI4P10075 376 aa5.34□□□□□ -1.55
NIPBL-208ENST00000514335 GUSBP11Q6P575 273 aa5.34□□□□□ -1.55
NIPBL-208ENST00000514335 TRBV5-7A0A0A0MS05 114 aa5.34□□□□□ -1.55
NIPBL-208ENST00000514335 LOC100131303A0A0U1RQF7 123 aa5.34□□□□□ -1.55
NIPBL-208ENST00000514335 LOC389332A0A1B0GUA5 103 aa5.34□□□□□ -1.55
NIPBL-208ENST00000514335 IBA57-AS1B1ANH7 110 aa5.34□□□□□ -1.55
NIPBL-208ENST00000514335 IFI27P40305 119 aaPredicted RBP5.34□□□□□ -1.55
NIPBL-208ENST00000514335 C2orf82Q6UX34 121 aa5.34□□□□□ -1.55
NIPBL-208ENST00000514335 SPTSSAQ969W0 71 aa5.34□□□□□ -1.55
NIPBL-208ENST00000514335 LRP4O75096 1905 aa5.34□□□□□ -1.55
NIPBL-208ENST00000514335 A0A087WVE0 104 aa5.34□□□□□ -1.56
NIPBL-208ENST00000514335 K7EQD1 137 aa5.34□□□□□ -1.56
NIPBL-208ENST00000514335 TOMM6Q96B49 74 aa5.34□□□□□ -1.56
NIPBL-208ENST00000514335 NPCDR1Q9BY65 106 aa5.34□□□□□ -1.56
NIPBL-208ENST00000514335 ADARB2-AS1A8MUL3 147 aa5.33□□□□□ -1.56
NIPBL-208ENST00000514335 DEFA4P12838 97 aa5.33□□□□□ -1.56
NIPBL-208ENST00000514335 FGF12P61328 243 aa5.33□□□□□ -1.56
NIPBL-208ENST00000514335 NDUFA11Q86Y39 141 aa5.33□□□□□ -1.56
NIPBL-208ENST00000514335 DIRC1Q969H9 104 aa5.33□□□□□ -1.56
NIPBL-208ENST00000514335 BBC3Q96PG8 261 aaPredicted RBP5.33□□□□□ -1.56
NIPBL-208ENST00000514335 OSTCQ9NRP0 149 aa5.33□□□□□ -1.56
NIPBL-208ENST00000514335 TAS2R4Q9NYW5 299 aa5.33□□□□□ -1.56
NIPBL-208ENST00000514335 ZFYVE26Q68DK2 2539 aa5.33□□□□□ -1.56
NIPBL-208ENST00000514335 A0A096LNJ9 63 aa5.33□□□□□ -1.56
NIPBL-208ENST00000514335 C9JCJ5 164 aa5.33□□□□□ -1.56
NIPBL-208ENST00000514335 LINC01554Q52M75 96 aa5.33□□□□□ -1.56
NIPBL-208ENST00000514335 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
NIPBL-208ENST00000514335 LY96Q9Y6Y9 160 aa5.33□□□□□ -1.56
NIPBL-208ENST00000514335 IGKV1-8A0A0C4DH67 115 aa5.32□□□□□ -1.56
NIPBL-208ENST00000514335 PIRTP0C851 137 aa5.32□□□□□ -1.56
NIPBL-208ENST00000514335 DEFB124Q8NES8 71 aa5.32□□□□□ -1.56
NIPBL-208ENST00000514335 FAM168AQ92567 244 aa5.32□□□□□ -1.56
NIPBL-208ENST00000514335 ZNF71Q9NQZ8 489 aaPredicted RBP5.32□□□□□ -1.56
NIPBL-208ENST00000514335 C17orf51A8MQB3 221 aa5.32□□□□□ -1.56
NIPBL-208ENST00000514335 BLCAPP62952 87 aa5.32□□□□□ -1.56
NIPBL-208ENST00000514335 PSMG4Q5JS54 123 aa5.32□□□□□ -1.56
NIPBL-208ENST00000514335 LYPD6Q86Y78 171 aa5.32□□□□□ -1.56
NIPBL-208ENST00000514335 ZNF525Q8N782 197 aa5.32□□□□□ -1.56
NIPBL-208ENST00000514335 DMXL1Q9Y485 3027 aa5.32□□□□□ -1.56
NIPBL-208ENST00000514335 IGHV1-45A0A0A0MS14 117 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 A0A1B0GWA3 101 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 A6NN06 94 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 WNT9BO14905 357 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 PLA2G1BP04054 148 aaKnown RBP5.31□□□□□ -1.56
NIPBL-208ENST00000514335 TNP2Q05952 138 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 ZNF818PQ6ZRF7 136 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 FOXL2NBQ6ZUU3 175 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 FAM216BQ8N7L0 139 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 DNAJC13O75165 2243 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 F8WEM9 126 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 TFF1P04155 84 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 PRSS2P07478 247 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 UBE2BP63146 152 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 ATXN8Q156A1 80 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 Q6ZS52 159 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 ZNRF1Q8ND25 227 aa5.31□□□□□ -1.56
NIPBL-208ENST00000514335 MRPL35Q9NZE8 188 aaKnown RBP5.31□□□□□ -1.56
NIPBL-208ENST00000514335 A0A0B4J2C4 111 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 A0A0G2JRQ6 117 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 IGHV4-39P01824 125 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 RNASE4P34096 147 aaKnown RBP5.3□□□□□ -1.56
NIPBL-208ENST00000514335 NRACQ8N912 160 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 Q6ZRM9 215 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 CLEC2BQ92478 149 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 IFI27L1Q96BM0 104 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 DOCK10Q96BY6 2186 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 H7C423 109 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 CCL22O00626 93 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 IGLV3-27P01718 113 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 C1orf100Q5SVJ3 147 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 PRSS3P2Q8NHM4 247 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 Q9HAA7 133 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 PSENENQ9NZ42 101 aa5.3□□□□□ -1.56
NIPBL-208ENST00000514335 CACNA1IQ9P0X4 2223 aa5.29□□□□□ -1.56
NIPBL-208ENST00000514335 IGKV1-27A0A075B6S5 117 aa5.29□□□□□ -1.56
NIPBL-208ENST00000514335 A0A0J9YXV3 536 aa5.29□□□□□ -1.56
NIPBL-208ENST00000514335 NTN3O00634 580 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-208ENST00000514335 TRBV12-3P01733 135 aa5.29□□□□□ -1.56
NIPBL-208ENST00000514335 RPRMLQ8N4K4 120 aa5.29□□□□□ -1.56
NIPBL-208ENST00000514335 C11orf52Q96A22 123 aa5.29□□□□□ -1.56
NIPBL-208ENST00000514335 PINLYPA6NC86 204 aa5.29□□□□□ -1.56
NIPBL-208ENST00000514335 ESRGQ1W209 222 aa5.29□□□□□ -1.56
NIPBL-208ENST00000514335 MAP6D1Q9H9H5 199 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms