RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 GAGE2BQ13066 116 aa4.3□□□□□ -1.72
CLDND1-229ENST00000513988 PXDC1Q5TGL8 231 aa4.3□□□□□ -1.72
CLDND1-229ENST00000513988 LINC00304Q8N9R0 145 aa4.3□□□□□ -1.72
CLDND1-229ENST00000513988 GLYATL2Q8WU03 294 aa4.3□□□□□ -1.72
CLDND1-229ENST00000513988 RAB2BQ8WUD1 216 aa4.3□□□□□ -1.72
CLDND1-229ENST00000513988 PYDC1Q8WXC3 89 aa4.3□□□□□ -1.72
CLDND1-229ENST00000513988 FKBP14Q9NWM8 211 aa4.3□□□□□ -1.72
CLDND1-229ENST00000513988 TIMM9Q9Y5J7 89 aa4.3□□□□□ -1.72
CLDND1-229ENST00000513988 TRBV19A0A075B6N1 114 aa4.29□□□□□ -1.72
CLDND1-229ENST00000513988 TRAV6A0A075B6T7 132 aa4.29□□□□□ -1.72
CLDND1-229ENST00000513988 A0A1B0GVG6 124 aa4.29□□□□□ -1.72
CLDND1-229ENST00000513988 PGPEP1LA6NFU8 196 aa4.29□□□□□ -1.72
CLDND1-229ENST00000513988 WRBO00258 174 aa4.29□□□□□ -1.72
CLDND1-229ENST00000513988 AKR1C4P17516 323 aa4.29□□□□□ -1.72
CLDND1-229ENST00000513988 CAV2P51636 162 aa4.29□□□□□ -1.72
CLDND1-229ENST00000513988 MLLT11Q13015 90 aaPredicted RBP4.29□□□□□ -1.72
CLDND1-229ENST00000513988 SMCO1Q147U7 214 aa4.29□□□□□ -1.72
CLDND1-229ENST00000513988 C9orf116Q5BN46 136 aaPredicted RBP4.29□□□□□ -1.72
CLDND1-229ENST00000513988 EXOC3-AS1Q8N2X6 119 aa4.29□□□□□ -1.72
CLDND1-229ENST00000513988 OR5H6Q8NGV6 325 aa4.29□□□□□ -1.72
CLDND1-229ENST00000513988 TSKUQ8WUA8 353 aa4.29□□□□□ -1.72
CLDND1-229ENST00000513988 ASB13Q8WXK3 278 aa4.29□□□□□ -1.72
CLDND1-229ENST00000513988 AAMDCQ9H7C9 122 aa4.29□□□□□ -1.72
CLDND1-229ENST00000513988 A8MWV9 139 aa4.28□□□□□ -1.72
CLDND1-229ENST00000513988 AGPAT2O15120 278 aa4.28□□□□□ -1.72
CLDND1-229ENST00000513988 RPP30P78346 268 aaKnown RBP4.28□□□□□ -1.72
CLDND1-229ENST00000513988 RPL36AP83881 106 aaKnown RBP4.28□□□□□ -1.72
CLDND1-229ENST00000513988 EIF5AL1Q6IS14 154 aaKnown RBP4.28□□□□□ -1.72
CLDND1-229ENST00000513988 COX6B2Q6YFQ2 88 aa4.28□□□□□ -1.72
CLDND1-229ENST00000513988 FP248Q71RG6 208 aaPredicted RBP4.28□□□□□ -1.72
CLDND1-229ENST00000513988 OR51S1Q8NGJ8 323 aa4.28□□□□□ -1.72
CLDND1-229ENST00000513988 ZFAND1Q8TCF1 268 aa4.28□□□□□ -1.72
CLDND1-229ENST00000513988 RPL36ALQ969Q0 106 aaKnown RBP4.28□□□□□ -1.72
CLDND1-229ENST00000513988 CARD19Q96LW7 228 aa4.28□□□□□ -1.72
CLDND1-229ENST00000513988 COMMD3Q9UBI1 195 aa4.28□□□□□ -1.72
CLDND1-229ENST00000513988 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
CLDND1-229ENST00000513988 GVQW2A0A096LPI5 108 aaPredicted RBP4.27□□□□□ -1.73
CLDND1-229ENST00000513988 PTGES3LE9PB15 166 aa4.27□□□□□ -1.73
CLDND1-229ENST00000513988 GOSR2O14653 212 aa4.27□□□□□ -1.73
CLDND1-229ENST00000513988 NDUFB4O95168 129 aa4.27□□□□□ -1.73
CLDND1-229ENST00000513988 UBE2D3P61077 147 aa4.27□□□□□ -1.73
CLDND1-229ENST00000513988 UBE2D2P62837 147 aa4.27□□□□□ -1.73
CLDND1-229ENST00000513988 GAGE6Q13070 117 aa4.27□□□□□ -1.73
CLDND1-229ENST00000513988 C10orf113Q5VZT2 155 aa4.27□□□□□ -1.73
CLDND1-229ENST00000513988 C22orf42Q6IC83 251 aa4.27□□□□□ -1.73
CLDND1-229ENST00000513988 GPX8Q8TED1 209 aa4.27□□□□□ -1.73
CLDND1-229ENST00000513988 PTH2Q96A98 100 aa4.27□□□□□ -1.73
CLDND1-229ENST00000513988 PHLDA3Q9Y5J5 127 aa4.27□□□□□ -1.73
CLDND1-229ENST00000513988 KMT2DO14686 5537 aa4.26□□□□□ -1.73
CLDND1-229ENST00000513988 TRAV21A0A0B4J279 112 aa4.26□□□□□ -1.73
CLDND1-229ENST00000513988 GAGE12HA6NDE8 117 aa4.26□□□□□ -1.73
CLDND1-229ENST00000513988 K7EPK0 472 aa4.26□□□□□ -1.73
CLDND1-229ENST00000513988 TBPP20226 339 aa4.26□□□□□ -1.73
CLDND1-229ENST00000513988 PRSS3P35030 304 aa4.26□□□□□ -1.73
CLDND1-229ENST00000513988 SLC38A11Q08AI6 406 aa4.26□□□□□ -1.73
CLDND1-229ENST00000513988 PDE6HQ13956 83 aa4.26□□□□□ -1.73
CLDND1-229ENST00000513988 LGALSLQ3ZCW2 172 aaPredicted RBP4.26□□□□□ -1.73
CLDND1-229ENST00000513988 KRTAP11-1Q8IUC1 163 aa4.26□□□□□ -1.73
CLDND1-229ENST00000513988 SOSTQ9BQB4 213 aa4.26□□□□□ -1.73
CLDND1-229ENST00000513988 TRBV7-3A0A075B6L6 115 aa4.25□□□□□ -1.73
CLDND1-229ENST00000513988 LOC107984640A0A0U1RRK4 108 aa4.25□□□□□ -1.73
CLDND1-229ENST00000513988 TRDV1A0A1B0GX56 115 aa4.25□□□□□ -1.73
CLDND1-229ENST00000513988 RHODO00212 210 aa4.25□□□□□ -1.73
CLDND1-229ENST00000513988 S100A10P60903 97 aa4.25□□□□□ -1.73
CLDND1-229ENST00000513988 CTAG1AP78358 180 aa4.25□□□□□ -1.73
CLDND1-229ENST00000513988 NHLH2Q02577 135 aa4.25□□□□□ -1.73
CLDND1-229ENST00000513988 SPANXN5Q5MJ07 72 aa4.25□□□□□ -1.73
CLDND1-229ENST00000513988 UFSP1Q6NVU6 142 aa4.25□□□□□ -1.73
CLDND1-229ENST00000513988 IZUMO2Q6UXV1 221 aa4.25□□□□□ -1.73
CLDND1-229ENST00000513988 LHFPL1Q86WI0 220 aa4.25□□□□□ -1.73
CLDND1-229ENST00000513988 C8orf59Q8N0T1 100 aaPredicted RBP4.25□□□□□ -1.73
CLDND1-229ENST00000513988 CIB3Q96Q77 187 aaPredicted RBP4.25□□□□□ -1.73
CLDND1-229ENST00000513988 NAA60Q9H7X0 242 aa4.25□□□□□ -1.73
CLDND1-229ENST00000513988 GPN1Q9HCN4 374 aaPredicted RBP4.25□□□□□ -1.73
CLDND1-229ENST00000513988 LENEPQ9Y5L5 61 aa4.25□□□□□ -1.73
CLDND1-229ENST00000513988 TRBV10-1A0A0K0K1A3 114 aa4.24□□□□□ -1.73
CLDND1-229ENST00000513988 SCGB1D2O95969 90 aa4.24□□□□□ -1.73
CLDND1-229ENST00000513988 FGF6P10767 208 aa4.24□□□□□ -1.73
CLDND1-229ENST00000513988 FOXI1Q12951 378 aa4.24□□□□□ -1.73
CLDND1-229ENST00000513988 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.24□□□□□ -1.73
CLDND1-229ENST00000513988 TERB2Q8NHR7 220 aa4.24□□□□□ -1.73
CLDND1-229ENST00000513988 S100A16Q96FQ6 103 aaKnown RBP4.24□□□□□ -1.73
CLDND1-229ENST00000513988 JPT2Q9H910 190 aa4.24□□□□□ -1.73
CLDND1-229ENST00000513988 IGLV8-61A0A075B6I0 122 aa4.23□□□□□ -1.73
CLDND1-229ENST00000513988 RBAKDNA6NC62 111 aa4.23□□□□□ -1.73
CLDND1-229ENST00000513988 H3BP45 60 aa4.23□□□□□ -1.73
CLDND1-229ENST00000513988 TMEM127O75204 238 aa4.23□□□□□ -1.73
CLDND1-229ENST00000513988 MED6O75586 246 aa4.23□□□□□ -1.73
CLDND1-229ENST00000513988 SULT1A2P50226 295 aa4.23□□□□□ -1.73
CLDND1-229ENST00000513988 RRAS2P62070 204 aaPredicted RBP4.23□□□□□ -1.73
CLDND1-229ENST00000513988 FAM74A4Q5TZK3 123 aa4.23□□□□□ -1.73
CLDND1-229ENST00000513988 LINC00526Q96FQ7 95 aa4.23□□□□□ -1.73
CLDND1-229ENST00000513988 OPRPNQ99935 248 aaPredicted RBP4.23□□□□□ -1.73
CLDND1-229ENST00000513988 C14orf166Q9Y224 244 aaKnown RBP4.23□□□□□ -1.73
CLDND1-229ENST00000513988 STRAPQ9Y3F4 350 aaKnown RBP4.23□□□□□ -1.73
CLDND1-229ENST00000513988 LOC100506127A0A0U1RQW1 187 aa4.22□□□□□ -1.73
CLDND1-229ENST00000513988 F6UZH7 168 aa4.22□□□□□ -1.73
CLDND1-229ENST00000513988 GNAO1P09471 354 aa4.22□□□□□ -1.73
CLDND1-229ENST00000513988 KRTAP2-3P0C7H8 128 aa4.22□□□□□ -1.73
CLDND1-229ENST00000513988 CSN1S1P47710 185 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms