RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 H3BVH4 76 aa6.95□□□□□ -1.3
TOPBP1-209ENST00000513818 K7EN84 100 aa6.95□□□□□ -1.3
TOPBP1-209ENST00000513818 IGHV3-53P01767 116 aa6.95□□□□□ -1.3
TOPBP1-209ENST00000513818 TDRG1Q3Y452 100 aa6.95□□□□□ -1.3
TOPBP1-209ENST00000513818 IBA57Q5T440 356 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-209ENST00000513818 KCNS1Q96KK3 526 aa6.95□□□□□ -1.3
TOPBP1-209ENST00000513818 SMIM7Q9BQ49 75 aa6.95□□□□□ -1.3
TOPBP1-209ENST00000513818 C9JCJ5 164 aa6.94□□□□□ -1.3
TOPBP1-209ENST00000513818 RNASE3P12724 160 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-209ENST00000513818 CASC10Q5T4H9 136 aa6.94□□□□□ -1.3
TOPBP1-209ENST00000513818 OCC1Q8TAD7 63 aa6.94□□□□□ -1.3
TOPBP1-209ENST00000513818 DEFB131BA0A096LNP1 70 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 TRAV10A0A0B4J240 114 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 TEX48A0A1B0GUV7 120 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 A4D1N5 150 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 ZNF727A8MUV8 499 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 SPINK4O60575 86 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 GZMBP10144 247 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 S100A4P26447 101 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 ASIPP42127 132 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 DAZ2Q13117 558 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 PEA15Q15121 130 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 CEMP1Q6PRD7 247 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 ZNF575Q86XF7 245 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 LINC00612Q8N6U2 182 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 C9orf85Q96MD7 179 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 RNASE7Q9H1E1 156 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 TENM2Q9NT68 2774 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 RYR2Q92736 4967 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 HYDINQ4G0P3 5121 aa6.93□□□□□ -1.3
TOPBP1-209ENST00000513818 TRGV2A0A075B6R0 118 aa6.92□□□□□ -1.3
TOPBP1-209ENST00000513818 MUC21A0A0G2JKD1 596 aa6.92□□□□□ -1.3
TOPBP1-209ENST00000513818 MUC21A0A140T8X8 626 aa6.92□□□□□ -1.3
TOPBP1-209ENST00000513818 C19orf71A6NCJ1 209 aa6.92□□□□□ -1.3
TOPBP1-209ENST00000513818 NUPR2A6NF83 97 aa6.92□□□□□ -1.3
TOPBP1-209ENST00000513818 C3orf84H3BNL1 204 aa6.92□□□□□ -1.3
TOPBP1-209ENST00000513818 SFTA3P0C7M3 94 aa6.92□□□□□ -1.3
TOPBP1-209ENST00000513818 HOXA5P20719 270 aa6.92□□□□□ -1.3
TOPBP1-209ENST00000513818 OR2D3Q8NGH3 330 aa6.92□□□□□ -1.3
TOPBP1-209ENST00000513818 LYSTQ99698 3801 aa6.92□□□□□ -1.3
TOPBP1-209ENST00000513818 MUC4Q99102 2169 aa6.92□□□□□ -1.3
TOPBP1-209ENST00000513818 IGLL5B9A064 214 aa6.91□□□□□ -1.3
TOPBP1-209ENST00000513818 F5H768 121 aa6.91□□□□□ -1.3
TOPBP1-209ENST00000513818 M0R2P5 195 aa6.91□□□□□ -1.3
TOPBP1-209ENST00000513818 P01737 135 aa6.91□□□□□ -1.3
TOPBP1-209ENST00000513818 ATP5G1P05496 136 aa6.91□□□□□ -1.3
TOPBP1-209ENST00000513818 ARMS2P0C7Q2 107 aa6.91□□□□□ -1.3
TOPBP1-209ENST00000513818 SSTP61278 116 aa6.91□□□□□ -1.3
TOPBP1-209ENST00000513818 LINC01551Q86U37 167 aa6.91□□□□□ -1.3
TOPBP1-209ENST00000513818 COMMD7Q86VX2 200 aa6.91□□□□□ -1.3
TOPBP1-209ENST00000513818 DAZAP1Q96EP5 407 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-209ENST00000513818 SMIM12Q96EX1 92 aa6.91□□□□□ -1.3
TOPBP1-209ENST00000513818 RYR3Q15413 4870 aa6.91□□□□□ -1.3
TOPBP1-209ENST00000513818 M0R381 172 aa6.9□□□□□ -1.3
TOPBP1-209ENST00000513818 NDUFS6O75380 124 aaKnown RBP6.9□□□□□ -1.3
TOPBP1-209ENST00000513818 ADIRFQ15847 76 aa6.9□□□□□ -1.3
TOPBP1-209ENST00000513818 ZNF876PQ49A33 203 aa6.9□□□□□ -1.3
TOPBP1-209ENST00000513818 TMEM88Q6PEY1 159 aa6.9□□□□□ -1.3
TOPBP1-209ENST00000513818 POM121L12Q8N7R1 296 aa6.9□□□□□ -1.3
TOPBP1-209ENST00000513818 NUDT10Q8NFP7 164 aa6.9□□□□□ -1.3
TOPBP1-209ENST00000513818 OR10AG1Q8NH19 301 aa6.9□□□□□ -1.3
TOPBP1-209ENST00000513818 NUDT11Q96G61 164 aa6.9□□□□□ -1.3
TOPBP1-209ENST00000513818 ZNF479Q96JC4 524 aa6.9□□□□□ -1.3
TOPBP1-209ENST00000513818 TPPP3Q9BW30 176 aa6.9□□□□□ -1.3
TOPBP1-209ENST00000513818 DNAH6Q9C0G6 4158 aa6.9□□□□□ -1.31
TOPBP1-209ENST00000513818 IGHV4-4A0A075B6R2 117 aa6.89□□□□□ -1.31
TOPBP1-209ENST00000513818 IGHV3-73A0A0B4J1V6 119 aa6.89□□□□□ -1.31
TOPBP1-209ENST00000513818 A0A0J9YY99 117 aa6.89□□□□□ -1.31
TOPBP1-209ENST00000513818 GYPEP15421 78 aa6.89□□□□□ -1.31
TOPBP1-209ENST00000513818 RPL23P62829 140 aaKnown RBP6.89□□□□□ -1.31
TOPBP1-209ENST00000513818 LGALS9BQ3B8N2 356 aa6.89□□□□□ -1.31
TOPBP1-209ENST00000513818 SOHLH1Q5JUK2 328 aa6.89□□□□□ -1.31
TOPBP1-209ENST00000513818 RPP21Q9H633 154 aaKnown RBP6.89□□□□□ -1.31
TOPBP1-209ENST00000513818 JPT2Q9H910 190 aa6.89□□□□□ -1.31
TOPBP1-209ENST00000513818 IL36BQ9NZH7 164 aa6.89□□□□□ -1.31
TOPBP1-209ENST00000513818 KLK5Q9Y337 293 aaPredicted RBP6.89□□□□□ -1.31
TOPBP1-209ENST00000513818 NACAE9PAV3 2078 aa6.89□□□□□ -1.31
TOPBP1-209ENST00000513818 TRAV26-1A0A087WT03 109 aa6.88□□□□□ -1.31
TOPBP1-209ENST00000513818 GATCO43716 136 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-209ENST00000513818 ADCYAP1P18509 176 aa6.88□□□□□ -1.31
TOPBP1-209ENST00000513818 ERVFC1-1P60608 527 aa6.88□□□□□ -1.31
TOPBP1-209ENST00000513818 TMEM241Q24JQ0 296 aa6.88□□□□□ -1.31
TOPBP1-209ENST00000513818 DNLZQ5SXM8 178 aa6.88□□□□□ -1.31
TOPBP1-209ENST00000513818 RASL10AQ92737 203 aa6.88□□□□□ -1.31
TOPBP1-209ENST00000513818 ISOC2Q96AB3 205 aa6.88□□□□□ -1.31
TOPBP1-209ENST00000513818 SAMD10Q9BYL1 202 aa6.88□□□□□ -1.31
TOPBP1-209ENST00000513818 SCRT2Q9NQ03 307 aa6.88□□□□□ -1.31
TOPBP1-209ENST00000513818 BIN3Q9NQY0 253 aa6.88□□□□□ -1.31
TOPBP1-209ENST00000513818 NAT8Q9UHE5 227 aa6.88□□□□□ -1.31
TOPBP1-209ENST00000513818 PHLDA3Q9Y5J5 127 aa6.88□□□□□ -1.31
TOPBP1-209ENST00000513818 TRAV4A0A0B4J268 109 aa6.87□□□□□ -1.31
TOPBP1-209ENST00000513818 CXCL1P09341 107 aa6.87□□□□□ -1.31
TOPBP1-209ENST00000513818 IGLC6P0CF74 106 aa6.87□□□□□ -1.31
TOPBP1-209ENST00000513818 FAM74A3Q4VXF1 159 aa6.87□□□□□ -1.31
TOPBP1-209ENST00000513818 CFAP126Q5VTH2 177 aa6.87□□□□□ -1.31
TOPBP1-209ENST00000513818 FER1L6-AS1Q8NA97 138 aa6.87□□□□□ -1.31
TOPBP1-209ENST00000513818 OR4C5Q8NGB2 326 aa6.87□□□□□ -1.31
TOPBP1-209ENST00000513818 SMDT1Q9H4I9 107 aa6.87□□□□□ -1.31
TOPBP1-209ENST00000513818 LY96Q9Y6Y9 160 aa6.87□□□□□ -1.31
TOPBP1-209ENST00000513818 DNAH2Q9P225 4427 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms