RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 UBE2DNLQ8IWF7 75 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 C11orf52Q96A22 123 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 Q9H8V8 135 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 SCRT2Q9NQ03 307 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 RYR1P21817 5038 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 IGLV2-18A0A075B6J9 118 aa6.67□□□□□ -1.34
RNF4-221ENST00000513643 SCO2A0A1W2PP80 73 aa6.67□□□□□ -1.34
RNF4-221ENST00000513643 K7EQD1 137 aa6.67□□□□□ -1.34
RNF4-221ENST00000513643 M0R2N4 97 aa6.67□□□□□ -1.34
RNF4-221ENST00000513643 LINC01559Q495D7 138 aa6.67□□□□□ -1.34
RNF4-221ENST00000513643 ZNF876PQ49A33 203 aa6.67□□□□□ -1.34
RNF4-221ENST00000513643 LYPD5Q6UWN5 251 aa6.67□□□□□ -1.34
RNF4-221ENST00000513643 TXNDC17Q9BRA2 123 aa6.67□□□□□ -1.34
RNF4-221ENST00000513643 KRTAP1-5Q9BYS1 174 aa6.67□□□□□ -1.34
RNF4-221ENST00000513643 IL36BQ9NZH7 164 aa6.67□□□□□ -1.34
RNF4-221ENST00000513643 SH2D1AO60880 128 aa6.66□□□□□ -1.34
RNF4-221ENST00000513643 BTF3P20290 206 aaKnown RBP6.66□□□□□ -1.34
RNF4-221ENST00000513643 UBE2G1P62253 170 aa6.66□□□□□ -1.34
RNF4-221ENST00000513643 MRPL23Q16540 153 aaKnown RBP6.66□□□□□ -1.34
RNF4-221ENST00000513643 ZNF506Q5JVG8 444 aa6.66□□□□□ -1.34
RNF4-221ENST00000513643 FAM162BQ5T6X4 162 aa6.66□□□□□ -1.34
RNF4-221ENST00000513643 OR4C5Q8NGB2 326 aa6.66□□□□□ -1.34
RNF4-221ENST00000513643 LYPD6BQ8NI32 183 aa6.66□□□□□ -1.34
RNF4-221ENST00000513643 MANBALQ9NQG1 85 aa6.66□□□□□ -1.34
RNF4-221ENST00000513643 ICOSQ9Y6W8 199 aa6.66□□□□□ -1.34
RNF4-221ENST00000513643 hCG_2014768A0A024R1R8 64 aa6.65□□□□□ -1.34
RNF4-221ENST00000513643 TRGV4A0A0C4DH28 118 aa6.65□□□□□ -1.34
RNF4-221ENST00000513643 A0A1B0GV50 99 aa6.65□□□□□ -1.34
RNF4-221ENST00000513643 TRBV6-4A0A1B0GX49 114 aa6.65□□□□□ -1.34
RNF4-221ENST00000513643 A0A1W2PPQ1 181 aa6.65□□□□□ -1.34
RNF4-221ENST00000513643 B4DEV8 164 aa6.65□□□□□ -1.34
RNF4-221ENST00000513643 IGLV2-8P01709 118 aa6.65□□□□□ -1.34
RNF4-221ENST00000513643 ORM1P02763 201 aa6.65□□□□□ -1.34
RNF4-221ENST00000513643 CXCL1P09341 107 aa6.65□□□□□ -1.34
RNF4-221ENST00000513643 AKR1C3P42330 323 aa6.65□□□□□ -1.34
RNF4-221ENST00000513643 TIRAPP58753 221 aa6.65□□□□□ -1.34
RNF4-221ENST00000513643 ZFP2Q6ZN57 461 aa6.65□□□□□ -1.34
RNF4-221ENST00000513643 SSBP4Q9BWG4 385 aaPredicted RBP6.65□□□□□ -1.34
RNF4-221ENST00000513643 C9JCJ5 164 aa6.64□□□□□ -1.35
RNF4-221ENST00000513643 ARMS2P0C7Q2 107 aa6.64□□□□□ -1.35
RNF4-221ENST00000513643 ASIPP42127 132 aa6.64□□□□□ -1.35
RNF4-221ENST00000513643 RPL35P42766 123 aaKnown RBP6.64□□□□□ -1.35
RNF4-221ENST00000513643 C1orf134Q5TEV5 83 aa6.64□□□□□ -1.35
RNF4-221ENST00000513643 DMRTA1Q5VZB9 504 aa6.64□□□□□ -1.35
RNF4-221ENST00000513643 Q6ZSN1 163 aa6.64□□□□□ -1.35
RNF4-221ENST00000513643 NEGR1Q7Z3B1 354 aa6.64□□□□□ -1.35
RNF4-221ENST00000513643 BAGE2Q86Y30 109 aa6.64□□□□□ -1.35
RNF4-221ENST00000513643 SLC25A29Q8N8R3 303 aa6.64□□□□□ -1.35
RNF4-221ENST00000513643 GNG13Q9P2W3 67 aa6.64□□□□□ -1.35
RNF4-221ENST00000513643 APOBP04114 4563 aaKnown RBP6.64□□□□□ -1.35
RNF4-221ENST00000513643 HSPG2P98160 4391 aa6.63□□□□□ -1.35
RNF4-221ENST00000513643 LOC100131303A0A0U1RQF7 123 aa6.63□□□□□ -1.35
RNF4-221ENST00000513643 A8MWV9 139 aa6.63□□□□□ -1.35
RNF4-221ENST00000513643 NXPH4O95158 308 aa6.63□□□□□ -1.35
RNF4-221ENST00000513643 LINC00694P0DN24 101 aa6.63□□□□□ -1.35
RNF4-221ENST00000513643 MED14OSP0DP75 135 aa6.63□□□□□ -1.35
RNF4-221ENST00000513643 GYPEP15421 78 aa6.63□□□□□ -1.35
RNF4-221ENST00000513643 MEF2BQ02080 365 aaPredicted RBP6.63□□□□□ -1.35
RNF4-221ENST00000513643 NHLRC2Q8NBF2 726 aa6.63□□□□□ -1.35
RNF4-221ENST00000513643 DERL1Q9BUN8 251 aa6.63□□□□□ -1.35
RNF4-221ENST00000513643 PARLQ9H300 379 aa6.63□□□□□ -1.35
RNF4-221ENST00000513643 TRBV20OR9-2A0A075B6H5 130 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 GRIFINA4D1Z8 144 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 C19orf71A6NCJ1 209 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 PRSS29PA6NIE9 313 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 TEX46H3BTG2 121 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 M0R036 132 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 SNAI2O43623 268 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 CRYGDP07320 174 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 BCL2P10415 239 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 MGST1P10620 155 aaKnown RBP6.62□□□□□ -1.35
RNF4-221ENST00000513643 S100A4P26447 101 aaKnown RBP6.62□□□□□ -1.35
RNF4-221ENST00000513643 SH2D6Q7Z4S9 175 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 C6orf223Q8N319 242 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 SMIM12Q96EX1 92 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 SFRP2Q96HF1 295 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 SAMD10Q9BYL1 202 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 JPT2Q9H910 190 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 VAX2Q9UIW0 290 aa6.62□□□□□ -1.35
RNF4-221ENST00000513643 H3BVH4 76 aa6.61□□□□□ -1.35
RNF4-221ENST00000513643 PDE6DO43924 150 aa6.61□□□□□ -1.35
RNF4-221ENST00000513643 OR5AL1P0C617 328 aa6.61□□□□□ -1.35
RNF4-221ENST00000513643 SRIP30626 198 aa6.61□□□□□ -1.35
RNF4-221ENST00000513643 TAGLN2P37802 199 aaKnown RBP6.61□□□□□ -1.35
RNF4-221ENST00000513643 TTC32Q5I0X7 151 aa6.61□□□□□ -1.35
RNF4-221ENST00000513643 SOHLH1Q5JUK2 328 aa6.61□□□□□ -1.35
RNF4-221ENST00000513643 Q6ZRN7 208 aaPredicted RBP6.61□□□□□ -1.35
RNF4-221ENST00000513643 Q9UF83 564 aa6.61□□□□□ -1.35
RNF4-221ENST00000513643 BOLA1Q9Y3E2 137 aa6.61□□□□□ -1.35
RNF4-221ENST00000513643 RAB19A4D1S5 217 aa6.6□□□□□ -1.35
RNF4-221ENST00000513643 K7EP13 123 aa6.6□□□□□ -1.35
RNF4-221ENST00000513643 SIVA1O15304 175 aa6.6□□□□□ -1.35
RNF4-221ENST00000513643 NDUFS6O75380 124 aaKnown RBP6.6□□□□□ -1.35
RNF4-221ENST00000513643 DNAH10OSP0CZ25 163 aa6.6□□□□□ -1.35
RNF4-221ENST00000513643 NKX2-5P52952 324 aaPredicted RBP6.6□□□□□ -1.35
RNF4-221ENST00000513643 BLOC1S1P78537 153 aa6.6□□□□□ -1.35
RNF4-221ENST00000513643 RPL19P84098 196 aaKnown RBP6.6□□□□□ -1.35
RNF4-221ENST00000513643 TNP2Q05952 138 aa6.6□□□□□ -1.35
RNF4-221ENST00000513643 RHOHQ15669 191 aa6.6□□□□□ -1.35
RNF4-221ENST00000513643 CENPWQ5EE01 88 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms