RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 FBLL1A6NHQ2 334 aaKnown RBP6.34□□□□□ -1.39
TCOF1-212ENST00000513538 HMGB3O15347 200 aaKnown RBP6.34□□□□□ -1.39
TCOF1-212ENST00000513538 CDC34P49427 236 aaPredicted RBP6.34□□□□□ -1.39
TCOF1-212ENST00000513538 LELP1Q5T871 98 aa6.34□□□□□ -1.39
TCOF1-212ENST00000513538 CFAP126Q5VTH2 177 aa6.34□□□□□ -1.39
TCOF1-212ENST00000513538 HSD17B11Q8NBQ5 300 aa6.34□□□□□ -1.39
TCOF1-212ENST00000513538 RAB24Q969Q5 203 aa6.34□□□□□ -1.39
TCOF1-212ENST00000513538 DNAJC30Q96LL9 226 aa6.34□□□□□ -1.39
TCOF1-212ENST00000513538 HYLS1Q96M11 299 aa6.34□□□□□ -1.39
TCOF1-212ENST00000513538 C11orf21Q9P2W6 132 aa6.34□□□□□ -1.39
TCOF1-212ENST00000513538 HMCN2Q8NDA2 5059 aa6.34□□□□□ -1.4
TCOF1-212ENST00000513538 RS1O15537 224 aa6.33□□□□□ -1.4
TCOF1-212ENST00000513538 IGLV2-11P01706 119 aa6.33□□□□□ -1.4
TCOF1-212ENST00000513538 PFN1P07737 140 aaKnown RBP6.33□□□□□ -1.4
TCOF1-212ENST00000513538 ARL14EPLP0DKL9 152 aa6.33□□□□□ -1.4
TCOF1-212ENST00000513538 LINC00694P0DN24 101 aa6.33□□□□□ -1.4
TCOF1-212ENST00000513538 LAGE3Q14657 143 aa6.33□□□□□ -1.4
TCOF1-212ENST00000513538 FAM74A1Q5RGS3 127 aa6.33□□□□□ -1.4
TCOF1-212ENST00000513538 SERTAD4-AS1Q5TG53 156 aa6.33□□□□□ -1.4
TCOF1-212ENST00000513538 RPL7L1Q6DKI1 246 aaKnown RBP6.33□□□□□ -1.4
TCOF1-212ENST00000513538 SH3BGRL3Q9H299 93 aa6.33□□□□□ -1.4
TCOF1-212ENST00000513538 RPH3ALQ9UNE2 315 aa6.33□□□□□ -1.4
TCOF1-212ENST00000513538 TRAV21A0A0B4J279 112 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 TRBV6-4A0A1B0GX49 114 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 MBP02144 154 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 TCRAP04437 139 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 GCHFRP30047 84 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 ZNF80P51504 273 aaPredicted RBP6.32□□□□□ -1.4
TCOF1-212ENST00000513538 GNG5P63218 68 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 RHOHQ15669 191 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 ZNF726P1Q15940 193 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 ZNF876PQ49A33 203 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 GOLT1AQ6ZVE7 132 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 DAZ4Q86SG3 579 aaKnown RBP6.32□□□□□ -1.4
TCOF1-212ENST00000513538 TMEM75Q8N9X5 138 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 ATP6V0E2Q8NHE4 81 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 BAALCQ8WXS3 180 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 C9orf85Q96MD7 179 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 TM2D2Q9BX73 214 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 GTSF1LQ9H1H1 148 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 DAZ3Q9NR90 486 aaKnown RBP6.32□□□□□ -1.4
TCOF1-212ENST00000513538 CYTL1Q9NRR1 136 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 Q9UF83 564 aa6.32□□□□□ -1.4
TCOF1-212ENST00000513538 SERTM2A0A1B0GWG4 89 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 GGTLC3B5MD39 225 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 RGS21Q2M5E4 152 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 ZNF506Q5JVG8 444 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 C5orf17Q8NAS9 161 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 SYT8Q8NBV8 401 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 OR2T35Q8NGX2 323 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 CMTM2Q8TAZ6 248 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 CIRBP-AS1Q8TBR5 109 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 SGK494Q96LW2 274 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 PRADC1Q9BSG0 188 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 SDF2L1Q9HCN8 221 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 TREM1Q9NP99 234 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 PLA2G2DQ9UNK4 145 aa6.31□□□□□ -1.4
TCOF1-212ENST00000513538 FAT3Q8TDW7 4589 aa6.3□□□□□ -1.4
TCOF1-212ENST00000513538 A0A1W2PRE2 83 aa6.3□□□□□ -1.4
TCOF1-212ENST00000513538 PGPEP1LA6NFU8 196 aa6.3□□□□□ -1.4
TCOF1-212ENST00000513538 CXorf1O96002 111 aa6.3□□□□□ -1.4
TCOF1-212ENST00000513538 OXTP01178 125 aa6.3□□□□□ -1.4
TCOF1-212ENST00000513538 RNASE3P12724 160 aaKnown RBP6.3□□□□□ -1.4
TCOF1-212ENST00000513538 HNRNPA3P51991 378 aaKnown RBP6.3□□□□□ -1.4
TCOF1-212ENST00000513538 SUMO1P63165 101 aaKnown RBP6.3□□□□□ -1.4
TCOF1-212ENST00000513538 INO80EQ8NBZ0 244 aaPredicted RBP6.3□□□□□ -1.4
TCOF1-212ENST00000513538 KCNS1Q96KK3 526 aa6.3□□□□□ -1.4
TCOF1-212ENST00000513538 CHAC1Q9BUX1 264 aa6.3□□□□□ -1.4
TCOF1-212ENST00000513538 ACTR3CQ9C0K3 210 aaPredicted RBP6.3□□□□□ -1.4
TCOF1-212ENST00000513538 TMEM167BQ9NRX6 74 aa6.3□□□□□ -1.4
TCOF1-212ENST00000513538 EPDR1Q9UM22 224 aa6.3□□□□□ -1.4
TCOF1-212ENST00000513538 PSG8Q9UQ74 426 aa6.3□□□□□ -1.4
TCOF1-212ENST00000513538 PKHD1L1Q86WI1 4243 aa6.3□□□□□ -1.4
TCOF1-212ENST00000513538 FXYD6-FXYD2A0A087WZ82 144 aa6.29□□□□□ -1.4
TCOF1-212ENST00000513538 TRAV8-3A0A0A6YYJ7 113 aa6.29□□□□□ -1.4
TCOF1-212ENST00000513538 CTXND1A0A1B0GTU2 59 aa6.29□□□□□ -1.4
TCOF1-212ENST00000513538 GAGE12JA6NER3 117 aa6.29□□□□□ -1.4
TCOF1-212ENST00000513538 GAGE1Q13065 139 aa6.29□□□□□ -1.4
TCOF1-212ENST00000513538 GAGE4Q13068 117 aa6.29□□□□□ -1.4
TCOF1-212ENST00000513538 GAGE5Q13069 117 aa6.29□□□□□ -1.4
TCOF1-212ENST00000513538 GAGE13Q4V321 117 aa6.29□□□□□ -1.4
TCOF1-212ENST00000513538 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
TCOF1-212ENST00000513538 BORCS7-ASMTA0A0B4J1R7 106 aa6.28□□□□□ -1.4
TCOF1-212ENST00000513538 TAAR5O14804 337 aa6.28□□□□□ -1.4
TCOF1-212ENST00000513538 MGST1P10620 155 aaKnown RBP6.28□□□□□ -1.4
TCOF1-212ENST00000513538 FLI1Q01543 452 aaPredicted RBP6.28□□□□□ -1.4
TCOF1-212ENST00000513538 PTH2Q96A98 100 aa6.28□□□□□ -1.4
TCOF1-212ENST00000513538 SAMD10Q9BYL1 202 aa6.28□□□□□ -1.4
TCOF1-212ENST00000513538 PARLQ9H300 379 aa6.28□□□□□ -1.4
TCOF1-212ENST00000513538 RBFOX3A6NFN3 312 aa6.27□□□□□ -1.41
TCOF1-212ENST00000513538 K7EQM0 130 aa6.27□□□□□ -1.41
TCOF1-212ENST00000513538 ARPC5O15511 151 aa6.27□□□□□ -1.41
TCOF1-212ENST00000513538 CIDEAO60543 219 aa6.27□□□□□ -1.41
TCOF1-212ENST00000513538 GCGP01275 180 aa6.27□□□□□ -1.41
TCOF1-212ENST00000513538 UFSP1Q6NVU6 142 aa6.27□□□□□ -1.41
TCOF1-212ENST00000513538 C14orf178Q8N769 122 aaPredicted RBP6.27□□□□□ -1.41
TCOF1-212ENST00000513538 CYB561D1Q8N8Q1 229 aa6.27□□□□□ -1.41
TCOF1-212ENST00000513538 OR11H4Q8NGC9 324 aa6.27□□□□□ -1.41
TCOF1-212ENST00000513538 LINC00479Q96M42 142 aa6.27□□□□□ -1.41
TCOF1-212ENST00000513538 JPT2Q9H910 190 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms