RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 DEFB121Q5J5C9 76 aa12.32□□□□□ -0.44
HMGCL-209ENST00000513148 STXBP6Q8NFX7 210 aa12.32□□□□□ -0.44
HMGCL-209ENST00000513148 GLMPQ8WWB7 406 aa12.32□□□□□ -0.44
HMGCL-209ENST00000513148 SIGMAR1Q99720 223 aa12.32□□□□□ -0.44
HMGCL-209ENST00000513148 SPAG8Q99932 426 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-209ENST00000513148 HIGD1AQ9Y241 93 aa12.32□□□□□ -0.44
HMGCL-209ENST00000513148 OR10AG1Q8NH19 301 aa12.32□□□□□ -0.44
HMGCL-209ENST00000513148 GFRA4Q9GZZ7 299 aa12.32□□□□□ -0.44
HMGCL-209ENST00000513148 COX7A2P2O60397 106 aa12.31□□□□□ -0.44
HMGCL-209ENST00000513148 PLP1P60201 277 aa12.31□□□□□ -0.44
HMGCL-209ENST00000513148 PATE2Q6UY27 113 aa12.31□□□□□ -0.44
HMGCL-209ENST00000513148 SIGLEC15Q6ZMC9 328 aa12.31□□□□□ -0.44
HMGCL-209ENST00000513148 SLC25A39Q9BZJ4 359 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-209ENST00000513148 WFDC10AQ9H1F0 79 aa12.31□□□□□ -0.44
HMGCL-209ENST00000513148 HIGD1CA8MV81 97 aa12.3□□□□□ -0.44
HMGCL-209ENST00000513148 HSD52Q0P140 79 aa12.3□□□□□ -0.44
HMGCL-209ENST00000513148 PSMG4Q5JS54 123 aa12.3□□□□□ -0.44
HMGCL-209ENST00000513148 Q8N1Y9 231 aa12.3□□□□□ -0.44
HMGCL-209ENST00000513148 H3BRN7 92 aa12.29□□□□□ -0.44
HMGCL-209ENST00000513148 FGF6P10767 208 aa12.28□□□□□ -0.44
HMGCL-209ENST00000513148 C10orf113Q5VZT2 155 aa12.28□□□□□ -0.44
HMGCL-209ENST00000513148 FA2HQ7L5A8 372 aa12.28□□□□□ -0.44
HMGCL-209ENST00000513148 LINC00305Q7Z4B0 112 aa12.28□□□□□ -0.44
HMGCL-209ENST00000513148 SHANK2-AS3Q9BTD1 123 aa12.28□□□□□ -0.44
HMGCL-209ENST00000513148 SMAD5-AS1Q9Y6J3 95 aa12.28□□□□□ -0.44
HMGCL-209ENST00000513148 A0A1W2PPM0 123 aa12.28□□□□□ -0.44
HMGCL-209ENST00000513148 A8MWL6 223 aa12.28□□□□□ -0.44
HMGCL-209ENST00000513148 CA1P00915 261 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-209ENST00000513148 BOD1L2Q8IYS8 172 aa12.28□□□□□ -0.44
HMGCL-209ENST00000513148 MTURNQ8N3F0 131 aa12.28□□□□□ -0.44
HMGCL-209ENST00000513148 J3QR89 54 aa12.27□□□□□ -0.44
HMGCL-209ENST00000513148 MORN5Q5VZ52 161 aa12.27□□□□□ -0.44
HMGCL-209ENST00000513148 CLUHP3Q96NS8 147 aa12.27□□□□□ -0.44
HMGCL-209ENST00000513148 KLF12Q9Y4X4 402 aa12.27□□□□□ -0.44
HMGCL-209ENST00000513148 OR11H12B2RN74 326 aa12.27□□□□□ -0.45
HMGCL-209ENST00000513148 IGHV4-30-4P0DP06 118 aa12.27□□□□□ -0.45
HMGCL-209ENST00000513148 OR1L4Q8NGR5 311 aa12.27□□□□□ -0.45
HMGCL-209ENST00000513148 ZNF492Q9P255 531 aa12.27□□□□□ -0.45
HMGCL-209ENST00000513148 H3BUT2 72 aa12.26□□□□□ -0.45
HMGCL-209ENST00000513148 AZU1P20160 251 aa12.26□□□□□ -0.45
HMGCL-209ENST00000513148 ODF3L2Q3SX64 289 aa12.26□□□□□ -0.45
HMGCL-209ENST00000513148 FOXI2Q6ZQN5 318 aa12.26□□□□□ -0.45
HMGCL-209ENST00000513148 LINC00173Q6ZV60 143 aa12.26□□□□□ -0.45
HMGCL-209ENST00000513148 S100A7AQ86SG5 101 aa12.26□□□□□ -0.45
HMGCL-209ENST00000513148 DCANP1Q8TF63 244 aa12.26□□□□□ -0.45
HMGCL-209ENST00000513148 TP73-AS1Q9UF72 201 aa12.26□□□□□ -0.45
HMGCL-209ENST00000513148 PEX7O00628 323 aa12.25□□□□□ -0.45
HMGCL-209ENST00000513148 FABP2P12104 132 aa12.25□□□□□ -0.45
HMGCL-209ENST00000513148 CAMPP49913 170 aa12.25□□□□□ -0.45
HMGCL-209ENST00000513148 KIR3DS1Q14943 382 aa12.25□□□□□ -0.45
HMGCL-209ENST00000513148 FAM167A-AS1Q96KT0 104 aa12.25□□□□□ -0.45
HMGCL-209ENST00000513148 SPCS1Q9Y6A9 102 aa12.25□□□□□ -0.45
HMGCL-209ENST00000513148 K7EQG2 157 aa12.25□□□□□ -0.45
HMGCL-209ENST00000513148 APRG1Q8IVJ8 170 aa12.25□□□□□ -0.45
HMGCL-209ENST00000513148 C19orf73Q9NVV2 129 aa12.25□□□□□ -0.45
HMGCL-209ENST00000513148 TRAV5A0A0B4J249 113 aa12.24□□□□□ -0.45
HMGCL-209ENST00000513148 ZNF688P0C7X2 276 aa12.24□□□□□ -0.45
HMGCL-209ENST00000513148 CSN1S1P47710 185 aa12.24□□□□□ -0.45
HMGCL-209ENST00000513148 GATD1Q8NB37 220 aa12.24□□□□□ -0.45
HMGCL-209ENST00000513148 SPATA25Q9BR10 227 aa12.24□□□□□ -0.45
HMGCL-209ENST00000513148 RPP21Q9H633 154 aaKnown RBP12.24□□□□□ -0.45
HMGCL-209ENST00000513148 MAP6D1Q9H9H5 199 aa12.24□□□□□ -0.45
HMGCL-209ENST00000513148 MLST8Q9BVC4 326 aa12.23□□□□□ -0.45
HMGCL-209ENST00000513148 PRKDCP78527 4128 aaKnown RBP12.23□□□□□ -0.45
HMGCL-209ENST00000513148 TRAV2A0A0B4J234 112 aa12.23□□□□□ -0.45
HMGCL-209ENST00000513148 RPL7P18124 248 aaKnown RBP12.23□□□□□ -0.45
HMGCL-209ENST00000513148 FOXA3P55318 350 aaPredicted RBP12.23□□□□□ -0.45
HMGCL-209ENST00000513148 DEFB131AP59861 70 aa12.23□□□□□ -0.45
HMGCL-209ENST00000513148 GPR82Q96P67 336 aa12.23□□□□□ -0.45
HMGCL-209ENST00000513148 LGALS9BQ3B8N2 356 aa12.22□□□□□ -0.45
HMGCL-209ENST00000513148 LGALS9CQ6DKI2 356 aa12.22□□□□□ -0.45
HMGCL-209ENST00000513148 SLC25A2Q9BXI2 301 aa12.22□□□□□ -0.45
HMGCL-209ENST00000513148 CT45A10P0DMU9 189 aa12.21□□□□□ -0.45
HMGCL-209ENST00000513148 UBE2L3P68036 154 aaKnown RBP12.21□□□□□ -0.45
HMGCL-209ENST00000513148 A0A1B0GW15 77 aa12.21□□□□□ -0.46
HMGCL-209ENST00000513148 C19orf71A6NCJ1 209 aa12.21□□□□□ -0.46
HMGCL-209ENST00000513148 GAGE12HA6NDE8 117 aa12.21□□□□□ -0.46
HMGCL-209ENST00000513148 F8W1H4 67 aa12.21□□□□□ -0.46
HMGCL-209ENST00000513148 C17orf77Q96MU5 243 aa12.21□□□□□ -0.46
HMGCL-209ENST00000513148 H3BTX0 84 aa12.2□□□□□ -0.46
HMGCL-209ENST00000513148 SNRPD3P62318 126 aaKnown RBP12.2□□□□□ -0.46
HMGCL-209ENST00000513148 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.2□□□□□ -0.46
HMGCL-209ENST00000513148 BLNKQ8WV28 456 aa12.2□□□□□ -0.46
HMGCL-209ENST00000513148 AP5S1Q9NUS5 200 aa12.2□□□□□ -0.46
HMGCL-209ENST00000513148 NPIPB6E9PJ23 425 aa12.2□□□□□ -0.46
HMGCL-209ENST00000513148 C16orf92Q96LL3 132 aa12.2□□□□□ -0.46
HMGCL-209ENST00000513148 ASCL2Q99929 193 aa12.2□□□□□ -0.46
HMGCL-209ENST00000513148 SOCS3O14543 225 aa12.19□□□□□ -0.46
HMGCL-209ENST00000513148 MRPS12O15235 138 aaKnown RBP12.19□□□□□ -0.46
HMGCL-209ENST00000513148 IGFL4Q6B9Z1 124 aa12.19□□□□□ -0.46
HMGCL-209ENST00000513148 LINC00479Q96M42 142 aa12.19□□□□□ -0.46
HMGCL-209ENST00000513148 FAM110AQ9BQ89 295 aa12.19□□□□□ -0.46
HMGCL-209ENST00000513148 PAXXQ9BUH6 204 aa12.19□□□□□ -0.46
HMGCL-209ENST00000513148 HIGD1BQ9P298 99 aa12.19□□□□□ -0.46
HMGCL-209ENST00000513148 EPDR1Q9UM22 224 aa12.19□□□□□ -0.46
HMGCL-209ENST00000513148 SMIM13P0DJ93 91 aa12.18□□□□□ -0.46
HMGCL-209ENST00000513148 CMC4P56277 68 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-209ENST00000513148 FMC1Q96HJ9 113 aa12.18□□□□□ -0.46
HMGCL-209ENST00000513148 VGLL1Q99990 258 aa12.18□□□□□ -0.46
HMGCL-209ENST00000513148 TEX48A0A1B0GUV7 120 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms