RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 A0A087WYN8 130 aa6.13□□□□□ -1.43
NEDD9-213ENST00000512665 RGS13O14921 159 aa6.13□□□□□ -1.43
NEDD9-213ENST00000512665 COX7A2P2O60397 106 aa6.13□□□□□ -1.43
NEDD9-213ENST00000512665 CRISP2P16562 243 aa6.13□□□□□ -1.43
NEDD9-213ENST00000512665 BTN1A1Q13410 526 aa6.13□□□□□ -1.43
NEDD9-213ENST00000512665 LGALSLQ3ZCW2 172 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-213ENST00000512665 C10orf113Q5VZT2 155 aa6.13□□□□□ -1.43
NEDD9-213ENST00000512665 RPL7L1Q6DKI1 246 aaKnown RBP6.13□□□□□ -1.43
NEDD9-213ENST00000512665 LINC00305Q7Z4B0 112 aa6.13□□□□□ -1.43
NEDD9-213ENST00000512665 OR10G9Q8NGN4 311 aa6.13□□□□□ -1.43
NEDD9-213ENST00000512665 SPXQ9BT56 116 aa6.13□□□□□ -1.43
NEDD9-213ENST00000512665 PLAC8Q9NZF1 115 aa6.13□□□□□ -1.43
NEDD9-213ENST00000512665 TMEM14CQ9P0S9 112 aa6.13□□□□□ -1.43
NEDD9-213ENST00000512665 hCG_2014768A0A024R1R8 64 aa6.12□□□□□ -1.43
NEDD9-213ENST00000512665 BORCS7-ASMTA0A0B4J1R7 106 aa6.12□□□□□ -1.43
NEDD9-213ENST00000512665 ATP6V0CP27449 155 aa6.12□□□□□ -1.43
NEDD9-213ENST00000512665 SMCPP49901 116 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-213ENST00000512665 TMUB2Q71RG4 321 aa6.12□□□□□ -1.43
NEDD9-213ENST00000512665 OR4C5Q8NGB2 326 aa6.12□□□□□ -1.43
NEDD9-213ENST00000512665 SPACA4Q8TDM5 124 aa6.12□□□□□ -1.43
NEDD9-213ENST00000512665 FAM167A-AS1Q96KT0 104 aa6.12□□□□□ -1.43
NEDD9-213ENST00000512665 OR51M1Q9H341 326 aa6.12□□□□□ -1.43
NEDD9-213ENST00000512665 BCL2L11O43521 198 aa6.11□□□□□ -1.43
NEDD9-213ENST00000512665 MBP02144 154 aa6.11□□□□□ -1.43
NEDD9-213ENST00000512665 OR10J4P0C629 311 aa6.11□□□□□ -1.43
NEDD9-213ENST00000512665 IGLC2P0DOY2 106 aa6.11□□□□□ -1.43
NEDD9-213ENST00000512665 SRSF9Q13242 221 aaKnown RBP eCLIP6.11□□□□□ -1.43
NEDD9-213ENST00000512665 RHOHQ15669 191 aa6.11□□□□□ -1.43
NEDD9-213ENST00000512665 GUK1Q16774 197 aa6.11□□□□□ -1.43
NEDD9-213ENST00000512665 GCSAMLQ5JQS6 135 aa6.11□□□□□ -1.43
NEDD9-213ENST00000512665 BPIFA4PQ86YQ2 179 aa6.11□□□□□ -1.43
NEDD9-213ENST00000512665 STOML3Q8TAV4 291 aa6.11□□□□□ -1.43
NEDD9-213ENST00000512665 MRPL53Q96EL3 112 aaKnown RBP6.11□□□□□ -1.43
NEDD9-213ENST00000512665 SAT2Q96F10 170 aaPredicted RBP6.11□□□□□ -1.43
NEDD9-213ENST00000512665 PRADC1Q9BSG0 188 aa6.11□□□□□ -1.43
NEDD9-213ENST00000512665 TRBV6-4A0A1B0GX49 114 aa6.1□□□□□ -1.43
NEDD9-213ENST00000512665 FAM231BA6NCW3 169 aa6.1□□□□□ -1.43
NEDD9-213ENST00000512665 USP17L23D6RBM5 183 aa6.1□□□□□ -1.43
NEDD9-213ENST00000512665 SLC17A3O00476 420 aa6.1□□□□□ -1.43
NEDD9-213ENST00000512665 ZNF253O75346 499 aa6.1□□□□□ -1.43
NEDD9-213ENST00000512665 PRSS1P07477 247 aa6.1□□□□□ -1.43
NEDD9-213ENST00000512665 HIST1H1EP10412 219 aaKnown RBP6.1□□□□□ -1.43
NEDD9-213ENST00000512665 RNASE4P34096 147 aaKnown RBP6.1□□□□□ -1.43
NEDD9-213ENST00000512665 EIF5AP63241 154 aaKnown RBP6.1□□□□□ -1.43
NEDD9-213ENST00000512665 PDE6HQ13956 83 aa6.1□□□□□ -1.43
NEDD9-213ENST00000512665 C9orf62Q8N4C0 152 aa6.1□□□□□ -1.43
NEDD9-213ENST00000512665 SLC25A29Q8N8R3 303 aa6.1□□□□□ -1.43
NEDD9-213ENST00000512665 SUN5Q8TC36 379 aa6.1□□□□□ -1.43
NEDD9-213ENST00000512665 DNAJC30Q96LL9 226 aa6.1□□□□□ -1.43
NEDD9-213ENST00000512665 LINC00477Q96M19 166 aa6.1□□□□□ -1.43
NEDD9-213ENST00000512665 PSORS1C2Q9UIG4 136 aa6.1□□□□□ -1.43
NEDD9-213ENST00000512665 A0A087WWC5 75 aa6.09□□□□□ -1.43
NEDD9-213ENST00000512665 KANTRA0A1W2PQU2 76 aa6.09□□□□□ -1.43
NEDD9-213ENST00000512665 H3BQ15 152 aa6.09□□□□□ -1.43
NEDD9-213ENST00000512665 CIDEAO60543 219 aa6.09□□□□□ -1.43
NEDD9-213ENST00000512665 GPX1P07203 203 aa6.09□□□□□ -1.43
NEDD9-213ENST00000512665 Q0VG73 95 aa6.09□□□□□ -1.43
NEDD9-213ENST00000512665 ZFP69Q49AA0 526 aa6.09□□□□□ -1.43
NEDD9-213ENST00000512665 MIR17HGQ75NE6 70 aa6.09□□□□□ -1.43
NEDD9-213ENST00000512665 NIT1Q86X76 327 aa6.09□□□□□ -1.43
NEDD9-213ENST00000512665 ZNF664Q8N3J9 261 aa6.09□□□□□ -1.43
NEDD9-213ENST00000512665 ZFAND2AQ8N6M9 145 aa6.09□□□□□ -1.43
NEDD9-213ENST00000512665 CHCHD7Q9BUK0 85 aa6.09□□□□□ -1.43
NEDD9-213ENST00000512665 SLC25A2Q9BXI2 301 aa6.09□□□□□ -1.43
NEDD9-213ENST00000512665 TRAV26-2A0A0B4J265 109 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 UMAD1C9J7I0 102 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 NBEAP1P0C6P0 100 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 STAG3L2P0CL84 134 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 STAG3L3P0CL85 134 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 TAS2R45P59539 299 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 RAB2AP61019 212 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 CNBPP62633 177 aaKnown RBP6.08□□□□□ -1.44
NEDD9-213ENST00000512665 ELOBQ15370 118 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 PQLC2Q6ZP29 291 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 SLC51BQ86UW2 128 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 ARL6IP6Q8N6S5 226 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 OR10G7Q8NGN6 311 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 Q8TAT8 98 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 FXYD5Q96DB9 178 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 URGCP-MRPS24S4R325 110 aa6.08□□□□□ -1.44
NEDD9-213ENST00000512665 TRBV19A0A075B6N1 114 aa6.07□□□□□ -1.44
NEDD9-213ENST00000512665 FBLL1A6NHQ2 334 aaKnown RBP6.07□□□□□ -1.44
NEDD9-213ENST00000512665 H7C1H1 209 aa6.07□□□□□ -1.44
NEDD9-213ENST00000512665 PFDN1O60925 122 aa6.07□□□□□ -1.44
NEDD9-213ENST00000512665 NDUFB4O95168 129 aa6.07□□□□□ -1.44
NEDD9-213ENST00000512665 LINC00694P0DN24 101 aa6.07□□□□□ -1.44
NEDD9-213ENST00000512665 TPT1P13693 172 aaKnown RBP6.07□□□□□ -1.44
NEDD9-213ENST00000512665 PRR4Q16378 134 aa6.07□□□□□ -1.44
NEDD9-213ENST00000512665 KHDC3LQ587J8 217 aa6.07□□□□□ -1.44
NEDD9-213ENST00000512665 RAB24Q969Q5 203 aa6.07□□□□□ -1.44
NEDD9-213ENST00000512665 UBE2WQ96B02 151 aa6.07□□□□□ -1.44
NEDD9-213ENST00000512665 C1orf43Q9BWL3 253 aa6.07□□□□□ -1.44
NEDD9-213ENST00000512665 ZNF471Q9BX82 626 aaPredicted RBP6.07□□□□□ -1.44
NEDD9-213ENST00000512665 ACTR3CQ9C0K3 210 aaPredicted RBP6.07□□□□□ -1.44
NEDD9-213ENST00000512665 KLK12Q9UKR0 248 aa6.07□□□□□ -1.44
NEDD9-213ENST00000512665 TRBV7-9A0A0J9YWB2 115 aa6.06□□□□□ -1.44
NEDD9-213ENST00000512665 CTXND1A0A1B0GTU2 59 aa6.06□□□□□ -1.44
NEDD9-213ENST00000512665 A0A1W2PPV4 95 aa6.06□□□□□ -1.44
NEDD9-213ENST00000512665 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-213ENST00000512665 M0R2P5 195 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms