RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 SOHLH1Q5JUK2 328 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 SAPCD1Q5SSQ6 148 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 Q6AWC8 147 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 ZNF705AQ6ZN79 300 aaPredicted RBP3.66□□□□□ -1.82
MSH3-202ENST00000512258 COX8CQ7Z4L0 72 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 EIF4E3Q8N5X7 224 aaKnown RBP3.66□□□□□ -1.82
MSH3-202ENST00000512258 OR11H2Q8NH07 326 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 RNF183Q96D59 192 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 RCHY1Q96PM5 261 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 LINC01587Q99440 93 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 B9D2Q9BPU9 175 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 TM2D3Q9BRN9 247 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 NDFIP1Q9BT67 221 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 RNASE7Q9H1E1 156 aaKnown RBP3.66□□□□□ -1.82
MSH3-202ENST00000512258 NAGKQ9UJ70 344 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 ZFP30Q9Y2G7 519 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 LENEPQ9Y5L5 61 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 COL7A1Q02388 2944 aa3.66□□□□□ -1.82
MSH3-202ENST00000512258 IGHV1OR15-1A0A075B7D0 117 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 IGKV3D-20A0A0C4DH25 116 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 IGHV4-28A0A0C4DH34 117 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 IGLV5-39A0A0G2JS06 123 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 PLAC8L1A1L4L8 177 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 GRIFINA4D1Z8 144 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 C19orf71A6NCJ1 209 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 FBLL1A6NHQ2 334 aaKnown RBP3.65□□□□□ -1.83
MSH3-202ENST00000512258 UBE2CO00762 179 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 NDUFS6O75380 124 aaKnown RBP3.65□□□□□ -1.83
MSH3-202ENST00000512258 AMBPP02760 352 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 PFN1P07737 140 aaKnown RBP3.65□□□□□ -1.83
MSH3-202ENST00000512258 GZMBP10144 247 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 RPL23P62829 140 aaKnown RBP3.65□□□□□ -1.83
MSH3-202ENST00000512258 TMEM241Q24JQ0 296 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 ANXA2RQ3ZCQ2 193 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 FAM162BQ5T6X4 162 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 UQCC3Q6UW78 93 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 LINC01551Q86U37 167 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 NIPSNAP3BQ9BS92 247 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 TMEM208Q9BTX3 173 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 C1QTNF4Q9BXJ3 329 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 SMDT1Q9H4I9 107 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 SDF2L1Q9HCN8 221 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 GOLT1BQ9Y3E0 138 aa3.65□□□□□ -1.83
MSH3-202ENST00000512258 TRAV21A0A0B4J279 112 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 MUC21A0A0G2JKD1 596 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 MUC21A0A140T8X8 626 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 FABP5P3A8MUU1 101 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 KRBOX1C9JBD0 128 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 F8W036 122 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 H7BYZ3 331 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 ORM1P02763 201 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 TYMSP04818 313 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 EMP1P54849 157 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 ADIRFQ15847 76 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 Q8NAQ8 132 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 C11orf72Q8NBR9 251 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 ISOC2Q96AB3 205 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 GSN-AS1Q9NRJ2 163 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 NAT8Q9UHE5 227 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 CELA1Q9UNI1 258 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 TP53TG1Q9Y2A0 90 aa3.64□□□□□ -1.83
MSH3-202ENST00000512258 IGHV3-16A0A0C4DH30 117 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 A0A0J9YWU9 116 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 TMEM189A5PLL7 270 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 CBY3A6NI87 242 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 B4DEV8 164 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 RNASE3P12724 160 aaKnown RBP3.63□□□□□ -1.83
MSH3-202ENST00000512258 RRN3P1Q2M238 152 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 TDRG1Q3Y452 100 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 FAM74A3Q4VXF1 159 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 C10orf91Q5T1B1 145 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 FAM159AQ6UWV7 190 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 TMEM256Q8N2U0 113 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 OR2D3Q8NGH3 330 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 RNASE8Q8TDE3 154 aaKnown RBP3.63□□□□□ -1.83
MSH3-202ENST00000512258 SMIM12Q96EX1 92 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 C20orf144Q9BQM9 153 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 PYGO2Q9BRQ0 406 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 LINC00467Q9BRT7 94 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 TIMM8BQ9Y5J9 83 aaPredicted RBP3.63□□□□□ -1.83
MSH3-202ENST00000512258 LY96Q9Y6Y9 160 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 DNAH9Q9NYC9 4486 aa3.63□□□□□ -1.83
MSH3-202ENST00000512258 HUWE1Q7Z6Z7 4374 aaKnown RBP3.63□□□□□ -1.83
MSH3-202ENST00000512258 TGP01266 2768 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 H3BVH4 76 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 GATCO43716 136 aaKnown RBP3.62□□□□□ -1.83
MSH3-202ENST00000512258 P01737 135 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 ARMS2P0C7Q2 107 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 MIFP14174 115 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 TCL1AP56279 114 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 ERVFC1-1P60608 527 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 SSTP61278 116 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 RNF212Q495C1 297 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 IBA57Q5T440 356 aaKnown RBP3.62□□□□□ -1.83
MSH3-202ENST00000512258 FAM222AQ5U5X8 452 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 ATRAIDQ6UW56 229 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 Q6ZTI0 123 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 FAM231DQ6ZW35 169 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 TMEM263Q8WUH6 116 aaKnown RBP3.62□□□□□ -1.83
MSH3-202ENST00000512258 GTSF1Q8WW33 167 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms