RNA–Protein interactions for RNA: ENST00000511873.6

SMN2-211, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 431 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-211ENST00000511873 TPT1P8Q9HAU6 139 aa0.87□□□□□ -2.27
SMN2-211ENST00000511873 ZDBF2Q9HCK1 2354 aa0.87□□□□□ -2.27
SMN2-211ENST00000511873 ZCCHC6Q5VYS8 1495 aaKnown RBP0.86□□□□□ -2.27
SMN2-211ENST00000511873 GPR98Q8WXG9 6306 aa0.86□□□□□ -2.27
SMN2-211ENST00000511873 ATG2AQ2TAZ0 1938 aa0.86□□□□□ -2.27
SMN2-211ENST00000511873 CXorf51AA0A1B0GTR3 108 aa0.86□□□□□ -2.27
SMN2-211ENST00000511873 J3QLW9 94 aa0.86□□□□□ -2.27
SMN2-211ENST00000511873 NPFFO15130 113 aa0.86□□□□□ -2.27
SMN2-211ENST00000511873 RPS25P62851 125 aaKnown RBP0.86□□□□□ -2.27
SMN2-211ENST00000511873 ZNF56Q15929 161 aa0.86□□□□□ -2.27
SMN2-211ENST00000511873 Q6ZS92 163 aa0.86□□□□□ -2.27
SMN2-211ENST00000511873 C5orf56Q8N8D9 126 aa0.86□□□□□ -2.27
SMN2-211ENST00000511873 PLAC4Q8WY50 150 aa0.86□□□□□ -2.27
SMN2-211ENST00000511873 PRG4Q92954 1404 aaPredicted RBP0.86□□□□□ -2.27
SMN2-211ENST00000511873 MYH6P13533 1939 aa0.85□□□□□ -2.27
SMN2-211ENST00000511873 TRBV10-1A0A0K0K1A3 114 aa0.85□□□□□ -2.27
SMN2-211ENST00000511873 NDUFA2O43678 99 aa0.85□□□□□ -2.27
SMN2-211ENST00000511873 PITX3O75364 302 aa0.85□□□□□ -2.27
SMN2-211ENST00000511873 HMGN1P05114 100 aa0.85□□□□□ -2.27
SMN2-211ENST00000511873 DEFB132Q7Z7B7 95 aa0.85□□□□□ -2.27
SMN2-211ENST00000511873 PPDPFLQ8WWR9 84 aa0.85□□□□□ -2.27
SMN2-211ENST00000511873 VPS25Q9BRG1 176 aa0.85□□□□□ -2.27
SMN2-211ENST00000511873 ERG28Q9UKR5 140 aa0.85□□□□□ -2.27
SMN2-211ENST00000511873 UHRF1BP1LA0JNW5 1464 aa0.85□□□□□ -2.27
SMN2-211ENST00000511873 CPDO75976 1380 aa0.84□□□□□ -2.27
SMN2-211ENST00000511873 ZNF670-ZNF695F2Z2N8 137 aa0.84□□□□□ -2.27
SMN2-211ENST00000511873 FXYD1O00168 92 aa0.84□□□□□ -2.27
SMN2-211ENST00000511873 NCR2O95944 276 aa0.84□□□□□ -2.27
SMN2-211ENST00000511873 COPZ1P61923 177 aa0.84□□□□□ -2.27
SMN2-211ENST00000511873 SAR1AQ9NR31 198 aa0.84□□□□□ -2.27
SMN2-211ENST00000511873 TRAV2A0A0B4J234 112 aa0.83□□□□□ -2.28
SMN2-211ENST00000511873 K7EIL1 84 aa0.83□□□□□ -2.28
SMN2-211ENST00000511873 LY6G6CO95867 125 aa0.83□□□□□ -2.28
SMN2-211ENST00000511873 SPINT3P49223 89 aa0.83□□□□□ -2.28
SMN2-211ENST00000511873 LINC01545Q5VT33 79 aa0.83□□□□□ -2.28
SMN2-211ENST00000511873 CDK12Q9NYV4 1490 aaPredicted RBP0.83□□□□□ -2.28
SMN2-211ENST00000511873 BICRAQ9NZM4 1560 aa0.83□□□□□ -2.28
SMN2-211ENST00000511873 AFDNP55196 1824 aaKnown RBP0.82□□□□□ -2.28
SMN2-211ENST00000511873 Q6ZUT4 128 aa0.82□□□□□ -2.28
SMN2-211ENST00000511873 ATOH7Q8N100 152 aa0.82□□□□□ -2.28
SMN2-211ENST00000511873 VSTM2AQ8TAG5 236 aa0.82□□□□□ -2.28
SMN2-211ENST00000511873 IFI27L1Q96BM0 104 aa0.82□□□□□ -2.28
SMN2-211ENST00000511873 SDF2Q99470 211 aa0.82□□□□□ -2.28
SMN2-211ENST00000511873 PSMG3Q9BT73 122 aaPredicted RBP0.82□□□□□ -2.28
SMN2-211ENST00000511873 NDUFA12Q9UI09 145 aa0.82□□□□□ -2.28
SMN2-211ENST00000511873 PLXNA2O75051 1894 aa0.82□□□□□ -2.28
SMN2-211ENST00000511873 RREB1Q92766 1687 aa0.81□□□□□ -2.28
SMN2-211ENST00000511873 DLEC1Q9Y238 1755 aa0.81□□□□□ -2.28
SMN2-211ENST00000511873 FBN2P35556 2912 aa0.81□□□□□ -2.28
SMN2-211ENST00000511873 PYYP10082 97 aa0.81□□□□□ -2.28
SMN2-211ENST00000511873 TSKUQ8WUA8 353 aa0.81□□□□□ -2.28
SMN2-211ENST00000511873 TSC22D3Q99576 134 aa0.81□□□□□ -2.28
SMN2-211ENST00000511873 PAIP2BQ9ULR5 123 aaKnown RBP0.81□□□□□ -2.28
SMN2-211ENST00000511873 PTPRMP28827 1452 aa0.8□□□□□ -2.28
SMN2-211ENST00000511873 KIF13AQ9H1H9 1805 aa0.8□□□□□ -2.28
SMN2-211ENST00000511873 APOC1P02654 83 aa0.8□□□□□ -2.28
SMN2-211ENST00000511873 PIRTP0C851 137 aa0.8□□□□□ -2.28
SMN2-211ENST00000511873 OR2T2Q6IF00 324 aa0.8□□□□□ -2.28
SMN2-211ENST00000511873 C10orf99Q6UWK7 81 aa0.8□□□□□ -2.28
SMN2-211ENST00000511873 ASH1LQ9NR48 2969 aaKnown RBP0.79□□□□□ -2.28
SMN2-211ENST00000511873 SPAG17Q6Q759 2223 aa0.79□□□□□ -2.28
SMN2-211ENST00000511873 ABCA4P78363 2273 aa0.79□□□□□ -2.28
SMN2-211ENST00000511873 TCRBV3S1A0A5B6 114 aa0.79□□□□□ -2.28
SMN2-211ENST00000511873 NPC2P61916 151 aa0.79□□□□□ -2.28
SMN2-211ENST00000511873 RRAS2P62070 204 aaPredicted RBP0.79□□□□□ -2.28
SMN2-211ENST00000511873 SPCS2Q15005 226 aa0.79□□□□□ -2.28
SMN2-211ENST00000511873 SPINK9Q5DT21 86 aa0.79□□□□□ -2.28
SMN2-211ENST00000511873 C6orf52Q5T4I8 152 aa0.79□□□□□ -2.28
SMN2-211ENST00000511873 TMEM141Q96I45 108 aa0.79□□□□□ -2.28
SMN2-211ENST00000511873 ZNF462Q96JM2 2506 aa0.78□□□□□ -2.28
SMN2-211ENST00000511873 A0A0D9SG42 100 aa0.78□□□□□ -2.28
SMN2-211ENST00000511873 TEX49A0A1B0GTD5 131 aa0.78□□□□□ -2.28
SMN2-211ENST00000511873 CCDC179H3BU77 68 aa0.78□□□□□ -2.28
SMN2-211ENST00000511873 GNG7O60262 68 aa0.78□□□□□ -2.28
SMN2-211ENST00000511873 ZNF137PP52743 207 aa0.78□□□□□ -2.28
SMN2-211ENST00000511873 SARNPP82979 210 aaKnown RBP0.78□□□□□ -2.28
SMN2-211ENST00000511873 KLKP1Q107X0 134 aa0.78□□□□□ -2.28
SMN2-211ENST00000511873 KCNRGQ8N5I3 272 aa0.78□□□□□ -2.28
SMN2-211ENST00000511873 TMEM191AQ9H0A3 160 aa0.78□□□□□ -2.28
SMN2-211ENST00000511873 TMEM242Q9NWH2 141 aa0.78□□□□□ -2.28
SMN2-211ENST00000511873 KNTC1P50748 2209 aa0.78□□□□□ -2.28
SMN2-211ENST00000511873 IBTKQ9P2D0 1353 aaPredicted RBP0.78□□□□□ -2.28
SMN2-211ENST00000511873 ADGRB1O14514 1584 aa0.78□□□□□ -2.29
SMN2-211ENST00000511873 BCORL1Q5H9F3 1711 aa0.78□□□□□ -2.29
SMN2-211ENST00000511873 ESPL1Q14674 2120 aa0.77□□□□□ -2.29
SMN2-211ENST00000511873 IL5P05113 134 aa0.77□□□□□ -2.29
SMN2-211ENST00000511873 GUCA1AP43080 201 aaPredicted RBP0.77□□□□□ -2.29
SMN2-211ENST00000511873 SPANXN1Q5VSR9 72 aa0.77□□□□□ -2.29
SMN2-211ENST00000511873 SCIMPQ6UWF3 145 aa0.77□□□□□ -2.29
SMN2-211ENST00000511873 CYP2G1PQ6ZSU1 146 aa0.77□□□□□ -2.29
SMN2-211ENST00000511873 DPH3Q96FX2 82 aa0.77□□□□□ -2.29
SMN2-211ENST00000511873 LINC00470Q9BZP3 86 aa0.77□□□□□ -2.29
SMN2-211ENST00000511873 TMEM14BQ9NUH8 114 aa0.77□□□□□ -2.29
SMN2-211ENST00000511873 BLMP54132 1417 aaPredicted RBP0.77□□□□□ -2.29
SMN2-211ENST00000511873 LOC285556D6RIA3 1793 aa0.77□□□□□ -2.29
SMN2-211ENST00000511873 TRAV12-3A0A0B4J271 114 aa0.76□□□□□ -2.29
SMN2-211ENST00000511873 K7EP13 123 aa0.76□□□□□ -2.29
SMN2-211ENST00000511873 ELOF1P60002 83 aaKnown RBP0.76□□□□□ -2.29
SMN2-211ENST00000511873 UBE2G1P62253 170 aa0.76□□□□□ -2.29
SMN2-211ENST00000511873 SPINK13Q1W4C9 94 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms