RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ZNF876PQ49A33 203 aa9.34□□□□□ -0.91
SNF8-206ENST00000509989 CFAP126Q5VTH2 177 aa9.34□□□□□ -0.91
SNF8-206ENST00000509989 Q6ZSN1 163 aa9.34□□□□□ -0.91
SNF8-206ENST00000509989 OR4C5Q8NGB2 326 aa9.34□□□□□ -0.91
SNF8-206ENST00000509989 MLST8Q9BVC4 326 aa9.34□□□□□ -0.91
SNF8-206ENST00000509989 Q9UF83 564 aa9.34□□□□□ -0.91
SNF8-206ENST00000509989 PRO0255Q9UI72 69 aa9.34□□□□□ -0.91
SNF8-206ENST00000509989 ZFP30Q9Y2G7 519 aa9.34□□□□□ -0.91
SNF8-206ENST00000509989 B4DEV8 164 aa9.33□□□□□ -0.92
SNF8-206ENST00000509989 RS1O15537 224 aa9.33□□□□□ -0.92
SNF8-206ENST00000509989 IGLV2-8P01709 118 aa9.33□□□□□ -0.92
SNF8-206ENST00000509989 RAB5CP51148 216 aa9.33□□□□□ -0.92
SNF8-206ENST00000509989 SAMD10Q9BYL1 202 aa9.33□□□□□ -0.92
SNF8-206ENST00000509989 K7EQD1 137 aa9.32□□□□□ -0.92
SNF8-206ENST00000509989 RPL35P42766 123 aaKnown RBP9.32□□□□□ -0.92
SNF8-206ENST00000509989 CCL18P55774 89 aa9.32□□□□□ -0.92
SNF8-206ENST00000509989 FAM162BQ5T6X4 162 aa9.32□□□□□ -0.92
SNF8-206ENST00000509989 BAGE2Q86Y30 109 aa9.32□□□□□ -0.92
SNF8-206ENST00000509989 C11orf52Q96A22 123 aa9.32□□□□□ -0.92
SNF8-206ENST00000509989 TCEAL7Q9BRU2 100 aa9.32□□□□□ -0.92
SNF8-206ENST00000509989 TRBV20OR9-2A0A075B6H5 130 aa9.31□□□□□ -0.92
SNF8-206ENST00000509989 NBDYA0A0U1RRE5 68 aa9.31□□□□□ -0.92
SNF8-206ENST00000509989 ARMS2P0C7Q2 107 aa9.31□□□□□ -0.92
SNF8-206ENST00000509989 GYPEP15421 78 aa9.31□□□□□ -0.92
SNF8-206ENST00000509989 GATA1P15976 413 aaPredicted RBP9.31□□□□□ -0.92
SNF8-206ENST00000509989 ASIPP42127 132 aa9.31□□□□□ -0.92
SNF8-206ENST00000509989 LINC01559Q495D7 138 aa9.31□□□□□ -0.92
SNF8-206ENST00000509989 DMRTA1Q5VZB9 504 aa9.31□□□□□ -0.92
SNF8-206ENST00000509989 EIF5AL1Q6IS14 154 aaKnown RBP9.31□□□□□ -0.92
SNF8-206ENST00000509989 PRR27Q6MZM9 219 aa9.31□□□□□ -0.92
SNF8-206ENST00000509989 LYPD5Q6UWN5 251 aa9.31□□□□□ -0.92
SNF8-206ENST00000509989 Q9H8V8 135 aa9.31□□□□□ -0.92
SNF8-206ENST00000509989 MANBALQ9NQG1 85 aa9.31□□□□□ -0.92
SNF8-206ENST00000509989 MRPS16Q9Y3D3 137 aaKnown RBP9.31□□□□□ -0.92
SNF8-206ENST00000509989 ICOSQ9Y6W8 199 aa9.31□□□□□ -0.92
SNF8-206ENST00000509989 MUC21A0A0G2JKD1 596 aa9.3□□□□□ -0.92
SNF8-206ENST00000509989 MUC21A0A140T8X8 626 aa9.3□□□□□ -0.92
SNF8-206ENST00000509989 A0A1B0GVY2 172 aa9.3□□□□□ -0.92
SNF8-206ENST00000509989 DNLZQ5SXM8 178 aa9.3□□□□□ -0.92
SNF8-206ENST00000509989 SLC25A29Q8N8R3 303 aa9.3□□□□□ -0.92
SNF8-206ENST00000509989 PCNPQ8WW12 178 aaKnown RBP9.3□□□□□ -0.92
SNF8-206ENST00000509989 BCL2P10415 239 aa9.29□□□□□ -0.92
SNF8-206ENST00000509989 S100A4P26447 101 aaKnown RBP9.29□□□□□ -0.92
SNF8-206ENST00000509989 MEF2BQ02080 365 aaPredicted RBP9.29□□□□□ -0.92
SNF8-206ENST00000509989 CENPWQ5EE01 88 aa9.29□□□□□ -0.92
SNF8-206ENST00000509989 UFSP1Q6NVU6 142 aa9.29□□□□□ -0.92
SNF8-206ENST00000509989 PARLQ9H300 379 aa9.29□□□□□ -0.92
SNF8-206ENST00000509989 SCRT2Q9NQ03 307 aa9.29□□□□□ -0.92
SNF8-206ENST00000509989 IL36BQ9NZH7 164 aa9.29□□□□□ -0.92
SNF8-206ENST00000509989 PKHD1P08F94 4074 aa9.29□□□□□ -0.92
SNF8-206ENST00000509989 GZMBP10144 247 aa9.28□□□□□ -0.92
SNF8-206ENST00000509989 FAM3BP58499 235 aaPredicted RBP9.28□□□□□ -0.92
SNF8-206ENST00000509989 PTH2Q96A98 100 aa9.28□□□□□ -0.92
SNF8-206ENST00000509989 UPK3BQ9BT76 320 aa9.28□□□□□ -0.92
SNF8-206ENST00000509989 TNFRSF18Q9Y5U5 241 aa9.28□□□□□ -0.92
SNF8-206ENST00000509989 NXPH4O95158 308 aa9.27□□□□□ -0.93
SNF8-206ENST00000509989 S100A9P06702 114 aaKnown RBP9.27□□□□□ -0.93
SNF8-206ENST00000509989 MRPL23Q16540 153 aaKnown RBP9.27□□□□□ -0.93
SNF8-206ENST00000509989 WFDC10BQ8IUB3 73 aa9.27□□□□□ -0.93
SNF8-206ENST00000509989 C14orf178Q8N769 122 aaPredicted RBP9.27□□□□□ -0.93
SNF8-206ENST00000509989 OR10AG1Q8NH19 301 aa9.27□□□□□ -0.93
SNF8-206ENST00000509989 MED9Q9NWA0 146 aa9.27□□□□□ -0.93
SNF8-206ENST00000509989 A0A087WWL8 130 aa9.26□□□□□ -0.93
SNF8-206ENST00000509989 PRSS29PA6NIE9 313 aa9.26□□□□□ -0.93
SNF8-206ENST00000509989 TEX46H3BTG2 121 aa9.26□□□□□ -0.93
SNF8-206ENST00000509989 M0R381 172 aa9.26□□□□□ -0.93
SNF8-206ENST00000509989 SRIP30626 198 aa9.26□□□□□ -0.93
SNF8-206ENST00000509989 SSTP61278 116 aa9.26□□□□□ -0.93
SNF8-206ENST00000509989 TNP2Q05952 138 aa9.26□□□□□ -0.93
SNF8-206ENST00000509989 SLAQ13239 276 aa9.26□□□□□ -0.93
SNF8-206ENST00000509989 C1orf134Q5TEV5 83 aa9.26□□□□□ -0.93
SNF8-206ENST00000509989 NEGR1Q7Z3B1 354 aa9.26□□□□□ -0.93
SNF8-206ENST00000509989 LYPD6BQ8NI32 183 aa9.26□□□□□ -0.93
SNF8-206ENST00000509989 VAX2Q9UIW0 290 aa9.26□□□□□ -0.93
SNF8-206ENST00000509989 KIAA1109Q2LD37 5005 aa9.26□□□□□ -0.93
SNF8-206ENST00000509989 CRYGDP07320 174 aa9.25□□□□□ -0.93
SNF8-206ENST00000509989 MGST1P10620 155 aaKnown RBP9.25□□□□□ -0.93
SNF8-206ENST00000509989 C19orf71A6NCJ1 209 aa9.24□□□□□ -0.93
SNF8-206ENST00000509989 RBFOX3A6NFN3 312 aa9.24□□□□□ -0.93
SNF8-206ENST00000509989 K7EN84 100 aa9.24□□□□□ -0.93
SNF8-206ENST00000509989 IFNA1P01562 189 aa9.24□□□□□ -0.93
SNF8-206ENST00000509989 FAM74A4Q5TZK3 123 aa9.24□□□□□ -0.93
SNF8-206ENST00000509989 SFRP2Q96HF1 295 aa9.24□□□□□ -0.93
SNF8-206ENST00000509989 TRBV6-4A0A1B0GX49 114 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 GAGE12JA6NER3 117 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 A8MWV9 139 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 SIVA1O15304 175 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 PDE6DO43924 150 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 BLOC1S1P78537 153 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 GAGE1Q13065 139 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 GAGE4Q13068 117 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 GAGE5Q13069 117 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 GAGE13Q4V321 117 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 C6orf223Q8N319 242 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 Q8N3U1 123 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 TXNDC17Q9BRA2 123 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 SSBP4Q9BWG4 385 aaPredicted RBP9.23□□□□□ -0.93
SNF8-206ENST00000509989 PHLDA3Q9Y5J5 127 aa9.23□□□□□ -0.93
SNF8-206ENST00000509989 SNAI2O43623 268 aa9.22□□□□□ -0.93
SNF8-206ENST00000509989 LINC00694P0DN24 101 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms