RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 COPS9Q8WXC6 57 aa0.91□□□□□ -2.26
XRCC4-204ENST00000509268 SPTSSAQ969W0 71 aa0.91□□□□□ -2.26
XRCC4-204ENST00000509268 LINC00526Q96FQ7 95 aa0.91□□□□□ -2.26
XRCC4-204ENST00000509268 REG4Q9BYZ8 158 aa0.91□□□□□ -2.26
XRCC4-204ENST00000509268 ORMDL1Q9P0S3 153 aa0.91□□□□□ -2.26
XRCC4-204ENST00000509268 ALPK2Q86TB3 2170 aa0.91□□□□□ -2.26
XRCC4-204ENST00000509268 CUL7Q14999 1698 aa0.91□□□□□ -2.26
XRCC4-204ENST00000509268 NINQ8N4C6 2090 aa0.91□□□□□ -2.26
XRCC4-204ENST00000509268 ZNF462Q96JM2 2506 aa0.9□□□□□ -2.26
XRCC4-204ENST00000509268 LAMB2P55268 1798 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 CEP192Q8TEP8 1941 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 MYOFQ9NZM1 2061 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 TRAV17A0A0B4J275 112 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 TRBV6-5A0A0K0K1A5 114 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 CXorf51AA0A1B0GTR3 108 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 NDUFB6O95139 128 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 MPC2O95563 127 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 IFNA17P01571 189 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 IGKV4-1P06312 121 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 SPINK8P0C7L1 97 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 IFITM1P13164 125 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 IL7P13232 177 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 PKIAP61925 76 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 RHOHQ15669 191 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 Q8N8P6 123 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 PLPP5Q8NEB5 264 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 ZNF431Q8TF32 576 aaPredicted RBP0.9□□□□□ -2.27
XRCC4-204ENST00000509268 TSKUQ8WUA8 353 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 C4orf3Q8WVX3 66 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 DSCR8Q96T75 97 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 LIMD2Q9BT23 127 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 CDC42SE1Q9NRR8 79 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 ABCC10Q5T3U5 1492 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 CECR2Q9BXF3 1484 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 LRP5O75197 1615 aa0.9□□□□□ -2.27
XRCC4-204ENST00000509268 TENM1Q9UKZ4 2725 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 MCM3APO60318 1980 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 PCDH15Q96QU1 1955 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 KIAA1549LQ6ZVL6 1849 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 TRAV2A0A0B4J234 112 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 TRBV6-4A0A1B0GX49 114 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 SNCGO76070 127 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 S100A10P60903 97 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 UBE2G1P62253 170 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 INSL4Q14641 139 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 KRTAP13-4Q3LI77 160 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 S100A7L2Q5SY68 101 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 SPANXN1Q5VSR9 72 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 LYPD5Q6UWN5 251 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 BRD3OSQ6XYD6 125 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 TMEM141Q96I45 108 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 SNHG12Q9BXW3 62 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 PTPRFP10586 1907 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 PTPRMP28827 1452 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 CR1P17927 2039 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 ANK1P16157 1881 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 KTN1Q86UP2 1357 aaKnown RBP0.89□□□□□ -2.27
XRCC4-204ENST00000509268 BCORL1Q5H9F3 1711 aa0.89□□□□□ -2.27
XRCC4-204ENST00000509268 ZNF609O15014 1411 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 A0A0J9YY99 117 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 TMEM30CPA0ZSE6 113 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 H3BRM9 83 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 NUPR1O60356 82 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 IGLV3-1P01715 115 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 GYPBP06028 91 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 POLR2JP52435 117 aaKnown RBP0.88□□□□□ -2.27
XRCC4-204ENST00000509268 GNG2P59768 71 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 RBM3P98179 157 aaKnown RBP0.88□□□□□ -2.27
XRCC4-204ENST00000509268 IQCJQ1A5X6 159 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 FAM74A1Q5RGS3 127 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 SVBPQ8N300 66 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 TTC9CQ8N5M4 171 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 PPDPFLQ8WWR9 84 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 ODF3Q96PU9 254 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 SPANXDQ9BXN6 97 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 KLK9Q9UKQ9 250 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 MUC5ACP98088 5654 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 COL5A3P25940 1745 aaPredicted RBP0.88□□□□□ -2.27
XRCC4-204ENST00000509268 PCNX2A6NKB5 2137 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 ARFGEF3Q5TH69 2177 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 BAHCC1Q9P281 2608 aa0.88□□□□□ -2.27
XRCC4-204ENST00000509268 COL6A3P12111 3177 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 IGKV3-7A0A075B6H7 116 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 NUPR2A6NF83 97 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 PPYP01298 95 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 PIPP12273 146 aaPredicted RBP0.87□□□□□ -2.27
XRCC4-204ENST00000509268 NPC2P61916 151 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 SPRNQ5BIV9 151 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 C9orf116Q5BN46 136 aaPredicted RBP0.87□□□□□ -2.27
XRCC4-204ENST00000509268 SLC48A1Q6P1K1 146 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 ZNF625Q96I27 306 aaPredicted RBP0.87□□□□□ -2.27
XRCC4-204ENST00000509268 DPH3P1Q9H4G8 78 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 MRPL36Q9P0J6 103 aaKnown RBP0.87□□□□□ -2.27
XRCC4-204ENST00000509268 CHD3Q12873 2000 aaKnown RBP0.87□□□□□ -2.27
XRCC4-204ENST00000509268 VWDEQ8N2E2 1590 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 ROBO1Q9Y6N7 1651 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 TNRC6AQ8NDV7 1962 aaKnown RBP0.87□□□□□ -2.27
XRCC4-204ENST00000509268 STRCP1A6NGW2 1772 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 MAPKBP1O60336 1514 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 IGHV3-30P01768 117 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms