RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 SCRT2Q9NQ03 307 aa7.39□□□□□ -1.23
POLR2J3-213ENST00000508848 NAGKQ9UJ70 344 aa7.39□□□□□ -1.23
POLR2J3-213ENST00000508848 TRAV26-1A0A087WT03 109 aa7.38□□□□□ -1.23
POLR2J3-213ENST00000508848 A8MWV9 139 aa7.38□□□□□ -1.23
POLR2J3-213ENST00000508848 RS1O15537 224 aa7.38□□□□□ -1.23
POLR2J3-213ENST00000508848 SH2D1AO60880 128 aa7.38□□□□□ -1.23
POLR2J3-213ENST00000508848 ASIPP42127 132 aa7.38□□□□□ -1.23
POLR2J3-213ENST00000508848 CCL18P55774 89 aa7.38□□□□□ -1.23
POLR2J3-213ENST00000508848 MRPL16Q9NX20 251 aaKnown RBP7.38□□□□□ -1.23
POLR2J3-213ENST00000508848 A0A1B0GV50 99 aa7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 TRBV6-4A0A1B0GX49 114 aa7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 RBFOX3A6NFN3 312 aa7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 C9JCJ5 164 aa7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 PAX4O43316 350 aa7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 BTF3P20290 206 aaKnown RBP7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 S100A4P26447 101 aaKnown RBP7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 NKX2-5P52952 324 aaPredicted RBP7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 MRPL23Q16540 153 aaKnown RBP7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 ZNF506Q5JVG8 444 aa7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 TEX261Q6UWH6 196 aa7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 OR4C5Q8NGB2 326 aa7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 UPK3BQ9BT76 320 aa7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 SMDT1Q9H4I9 107 aa7.37□□□□□ -1.23
POLR2J3-213ENST00000508848 A0A096LPF7 62 aa7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 TRGV4A0A0C4DH28 118 aa7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 PGPEP1LA6NFU8 196 aa7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 IGLV2-8P01709 118 aa7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 OR5AL1P0C617 328 aa7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 ARMS2P0C7Q2 107 aa7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 GATA1P15976 413 aaPredicted RBP7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 TIRAPP58753 221 aa7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 CFAP126Q5VTH2 177 aa7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 SYT8Q8NBV8 401 aa7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 ZNF479Q96JC4 524 aa7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 MED9Q9NWA0 146 aa7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 LY96Q9Y6Y9 160 aa7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 HYDINQ4G0P3 5121 aa7.36□□□□□ -1.23
POLR2J3-213ENST00000508848 C19orf71A6NCJ1 209 aa7.35□□□□□ -1.23
POLR2J3-213ENST00000508848 K7EP13 123 aa7.35□□□□□ -1.23
POLR2J3-213ENST00000508848 SNAI2O43623 268 aa7.35□□□□□ -1.23
POLR2J3-213ENST00000508848 NXPH4O95158 308 aa7.35□□□□□ -1.23
POLR2J3-213ENST00000508848 NUDT3O95989 172 aa7.35□□□□□ -1.23
POLR2J3-213ENST00000508848 MGST1P10620 155 aaKnown RBP7.35□□□□□ -1.23
POLR2J3-213ENST00000508848 GNG4P50150 75 aa7.35□□□□□ -1.23
POLR2J3-213ENST00000508848 RPS20P60866 119 aaKnown RBP7.35□□□□□ -1.23
POLR2J3-213ENST00000508848 Q6ZR54 194 aa7.35□□□□□ -1.23
POLR2J3-213ENST00000508848 FAM210AQ96ND0 272 aa7.35□□□□□ -1.23
POLR2J3-213ENST00000508848 DERL1Q9BUN8 251 aa7.35□□□□□ -1.23
POLR2J3-213ENST00000508848 ICOSQ9Y6W8 199 aa7.35□□□□□ -1.23
POLR2J3-213ENST00000508848 DNAH6Q9C0G6 4158 aa7.34□□□□□ -1.23
POLR2J3-213ENST00000508848 TRBV20OR9-2A0A075B6H5 130 aa7.34□□□□□ -1.23
POLR2J3-213ENST00000508848 RHODO00212 210 aa7.34□□□□□ -1.23
POLR2J3-213ENST00000508848 LORP23490 312 aaPredicted RBP7.34□□□□□ -1.23
POLR2J3-213ENST00000508848 CENPWQ5EE01 88 aa7.34□□□□□ -1.23
POLR2J3-213ENST00000508848 WDR73Q6P4I2 378 aa7.34□□□□□ -1.23
POLR2J3-213ENST00000508848 ZNRF2Q8NHG8 242 aa7.34□□□□□ -1.23
POLR2J3-213ENST00000508848 MRPS16Q9Y3D3 137 aaKnown RBP7.34□□□□□ -1.23
POLR2J3-213ENST00000508848 A0A1W2PPQ1 181 aa7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 XKRY2A2RUG3 117 aa7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 RAB19A4D1S5 217 aa7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 F2Z2F3 143 aa7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 ESRGQ1W209 222 aa7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 UFSP1Q6NVU6 142 aa7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 NEGR1Q7Z3B1 354 aa7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 UBE2DNLQ8IWF7 75 aa7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 ZFP82Q8N141 532 aa7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 DAZAP1Q96EP5 407 aaKnown RBP7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 SFRP2Q96HF1 295 aa7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 LINC00588Q9Y4M8 146 aa7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 PHLDA3Q9Y5J5 127 aa7.33□□□□□ -1.24
POLR2J3-213ENST00000508848 A0A0J9YY99 117 aa7.32□□□□□ -1.24
POLR2J3-213ENST00000508848 M0R036 132 aa7.32□□□□□ -1.24
POLR2J3-213ENST00000508848 SFTA3P0C7M3 94 aa7.32□□□□□ -1.24
POLR2J3-213ENST00000508848 RHOHQ15669 191 aa7.32□□□□□ -1.24
POLR2J3-213ENST00000508848 FAM74A3Q4VXF1 159 aa7.32□□□□□ -1.24
POLR2J3-213ENST00000508848 LYPD5Q6UWN5 251 aa7.32□□□□□ -1.24
POLR2J3-213ENST00000508848 OCC1Q8TAD7 63 aa7.32□□□□□ -1.24
POLR2J3-213ENST00000508848 PRADC1Q9BSG0 188 aa7.32□□□□□ -1.24
POLR2J3-213ENST00000508848 PARLQ9H300 379 aa7.32□□□□□ -1.24
POLR2J3-213ENST00000508848 Q9H8V8 135 aa7.32□□□□□ -1.24
POLR2J3-213ENST00000508848 H3BVH4 76 aa7.31□□□□□ -1.24
POLR2J3-213ENST00000508848 K7EQD1 137 aa7.31□□□□□ -1.24
POLR2J3-213ENST00000508848 IGHV3-53P01767 116 aa7.31□□□□□ -1.24
POLR2J3-213ENST00000508848 IGLC6P0CF74 106 aa7.31□□□□□ -1.24
POLR2J3-213ENST00000508848 XP32Q5T750 250 aa7.31□□□□□ -1.24
POLR2J3-213ENST00000508848 LINC00336Q6ZUF6 198 aa7.31□□□□□ -1.24
POLR2J3-213ENST00000508848 FAM231DQ6ZW35 169 aa7.31□□□□□ -1.24
POLR2J3-213ENST00000508848 SLC25A29Q8N8R3 303 aa7.31□□□□□ -1.24
POLR2J3-213ENST00000508848 NHLRC2Q8NBF2 726 aa7.31□□□□□ -1.24
POLR2J3-213ENST00000508848 EIF5A2Q9GZV4 153 aaKnown RBP7.31□□□□□ -1.24
POLR2J3-213ENST00000508848 TRBV10-1A0A0K0K1A3 114 aa7.3□□□□□ -1.24
POLR2J3-213ENST00000508848 GRIFINA4D1Z8 144 aa7.3□□□□□ -1.24
POLR2J3-213ENST00000508848 P01737 135 aa7.3□□□□□ -1.24
POLR2J3-213ENST00000508848 CRYGDP07320 174 aa7.3□□□□□ -1.24
POLR2J3-213ENST00000508848 GYPEP15421 78 aa7.3□□□□□ -1.24
POLR2J3-213ENST00000508848 FOXA3P55318 350 aaPredicted RBP7.3□□□□□ -1.24
POLR2J3-213ENST00000508848 TTC32Q5I0X7 151 aa7.3□□□□□ -1.24
POLR2J3-213ENST00000508848 PCNPQ8WW12 178 aaKnown RBP7.3□□□□□ -1.24
POLR2J3-213ENST00000508848 CNFNQ9BYD5 112 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms