RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 LINC00315P59091 139 aa2.59□□□□□ -1.99
HMGN1P11-201ENST00000508668 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
HMGN1P11-201ENST00000508668 LYPD5Q6UWN5 251 aa2.59□□□□□ -1.99
HMGN1P11-201ENST00000508668 PATE2Q6UY27 113 aa2.59□□□□□ -1.99
HMGN1P11-201ENST00000508668 ASB13Q8WXK3 278 aa2.59□□□□□ -1.99
HMGN1P11-201ENST00000508668 SEC22CQ9BRL7 303 aa2.59□□□□□ -1.99
HMGN1P11-201ENST00000508668 LINC00467Q9BRT7 94 aa2.59□□□□□ -1.99
HMGN1P11-201ENST00000508668 AGPAT4-IT1Q9H0P7 198 aa2.59□□□□□ -1.99
HMGN1P11-201ENST00000508668 Q9HAA7 133 aa2.59□□□□□ -1.99
HMGN1P11-201ENST00000508668 TREM1Q9NP99 234 aa2.59□□□□□ -1.99
HMGN1P11-201ENST00000508668 ZNF492Q9P255 531 aa2.59□□□□□ -1.99
HMGN1P11-201ENST00000508668 MBD2Q9UBB5 411 aa2.59□□□□□ -1.99
HMGN1P11-201ENST00000508668 LENEPQ9Y5L5 61 aa2.59□□□□□ -1.99
HMGN1P11-201ENST00000508668 STARD9Q9P2P6 4700 aa2.59□□□□□ -2
HMGN1P11-201ENST00000508668 ALMS1Q8TCU4 4167 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 A0A087WX48 190 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 TRAV4A0A0B4J268 109 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 IGHV3-38A0A0C4DH36 116 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 PGPA6NDG6 321 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 KLLNB2CW77 178 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 SMIM1B2RUZ4 78 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 GGTLC3B5MD39 225 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 F6UZH7 168 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 M0R2P5 195 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 TAAR5O14804 337 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 IFNA7P01567 189 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 CRISP2P16562 243 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 CRYBA4P53673 196 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 FGF8P55075 233 aaPredicted RBP2.58□□□□□ -2
HMGN1P11-201ENST00000508668 CD300CQ08708 224 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 PNRC1Q12796 327 aaPredicted RBP2.58□□□□□ -2
HMGN1P11-201ENST00000508668 ZNF266Q14584 549 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 ELOBQ15370 118 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 RHOHQ15669 191 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 VWC2Q2TAL6 325 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 TDRG1Q3Y452 100 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 LGALSLQ3ZCW2 172 aaPredicted RBP2.58□□□□□ -2
HMGN1P11-201ENST00000508668 ZNF876PQ49A33 203 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 SAPCD1Q5SSQ6 148 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 MIR17HGQ75NE6 70 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 INO80EQ8NBZ0 244 aaPredicted RBP2.58□□□□□ -2
HMGN1P11-201ENST00000508668 OR10G4Q8NGN3 311 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 OR10G9Q8NGN4 311 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 OR10G7Q8NGN6 311 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 Q8TAT8 98 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 C18orf15Q96N68 181 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 LYSTQ99698 3801 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 SMIM3Q9BZL3 60 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 WDR61Q9GZS3 305 aaKnown RBP2.58□□□□□ -2
HMGN1P11-201ENST00000508668 DPH3P1Q9H4G8 78 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 OTORQ9NRC9 128 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 KLF12Q9Y4X4 402 aa2.58□□□□□ -2
HMGN1P11-201ENST00000508668 A0A087WWC5 75 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 TRAV8-3A0A0A6YYJ7 113 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 BORCS7-ASMTA0A0B4J1R7 106 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 IGSF23A1L1A6 192 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 PLAC8L1A1L4L8 177 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 RBFOX3A6NFN3 312 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 INMT-MINDY4F8WBC2 141 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 K7EQD1 137 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 MRPS12O15235 138 aaKnown RBP2.57□□□□□ -2
HMGN1P11-201ENST00000508668 TSHBP01222 138 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 CRPP02741 224 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 SFTA3P0C7M3 94 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 MGST1P10620 155 aaKnown RBP2.57□□□□□ -2
HMGN1P11-201ENST00000508668 RPL12P30050 165 aaKnown RBP2.57□□□□□ -2
HMGN1P11-201ENST00000508668 ASIPP42127 132 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 UBE2G1P62253 170 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 SMUG1Q53HV7 270 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 GOLT1AQ6ZVE7 132 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 LINC00612Q8N6U2 182 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 ATP6V0E2Q8NHE4 81 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 STOML3Q8TAV4 291 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 DPH3Q96FX2 82 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 SLC25A2Q9BXI2 301 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 ACTR3CQ9C0K3 210 aaPredicted RBP2.57□□□□□ -2
HMGN1P11-201ENST00000508668 TMEM167BQ9NRX6 74 aa2.57□□□□□ -2
HMGN1P11-201ENST00000508668 DNAH1Q9P2D7 4330 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 A0A087WTM6 91 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 TRAV8-1A0A0A6YYK1 113 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 IGHV3-73A0A0B4J1V6 119 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 IGHV3-16A0A0C4DH30 117 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 A8MWV9 139 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 TMEM262E9PQX1 116 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 SIX6O95475 246 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 CXorf1O96002 111 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 GCGP01275 180 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 IGHV3-30P01768 117 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 IGHV3-33P01772 117 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 SMIM17P0DL12 118 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 IGHV3-30-3P0DP02 117 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 IGHV3-30-5P0DP03 117 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 TPT1P13693 172 aaKnown RBP2.56□□□□□ -2
HMGN1P11-201ENST00000508668 MT3P25713 68 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 CDC34P49427 236 aaPredicted RBP2.56□□□□□ -2
HMGN1P11-201ENST00000508668 PKIAP61925 76 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 ASAH1Q13510 395 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 C14orf177Q52M58 125 aa2.56□□□□□ -2
HMGN1P11-201ENST00000508668 GCSAMLQ5JQS6 135 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms