RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 Q6AWC8 147 aa11.13□□□□□ -0.63
LMNA-222ENST00000508500 TVP23CQ96ET8 276 aa11.13□□□□□ -0.63
LMNA-222ENST00000508500 SMIM7Q9BQ49 75 aa11.13□□□□□ -0.63
LMNA-222ENST00000508500 PARLQ9H300 379 aa11.13□□□□□ -0.63
LMNA-222ENST00000508500 NAT8Q9UHE5 227 aa11.13□□□□□ -0.63
LMNA-222ENST00000508500 EPDR1Q9UM22 224 aa11.13□□□□□ -0.63
LMNA-222ENST00000508500 C9JCJ5 164 aa11.12□□□□□ -0.63
LMNA-222ENST00000508500 CSN1S1P47710 185 aa11.12□□□□□ -0.63
LMNA-222ENST00000508500 CRYBA4P53673 196 aa11.12□□□□□ -0.63
LMNA-222ENST00000508500 TMEM241Q24JQ0 296 aa11.12□□□□□ -0.63
LMNA-222ENST00000508500 CMTM2Q8TAZ6 248 aa11.12□□□□□ -0.63
LMNA-222ENST00000508500 SCO2A0A1W2PP80 73 aa11.11□□□□□ -0.63
LMNA-222ENST00000508500 A0A1W2PPQ1 181 aa11.11□□□□□ -0.63
LMNA-222ENST00000508500 C16orf90A8MZG2 172 aa11.11□□□□□ -0.63
LMNA-222ENST00000508500 K7EQM0 130 aa11.11□□□□□ -0.63
LMNA-222ENST00000508500 PEX7O00628 323 aa11.11□□□□□ -0.63
LMNA-222ENST00000508500 PAX4O43316 350 aa11.11□□□□□ -0.63
LMNA-222ENST00000508500 CDK2AP2O75956 126 aa11.11□□□□□ -0.63
LMNA-222ENST00000508500 ZNF415Q09FC8 603 aa11.11□□□□□ -0.63
LMNA-222ENST00000508500 TTC32Q5I0X7 151 aa11.11□□□□□ -0.63
LMNA-222ENST00000508500 SMIM12Q96EX1 92 aa11.11□□□□□ -0.63
LMNA-222ENST00000508500 SDF2L1Q9HCN8 221 aa11.11□□□□□ -0.63
LMNA-222ENST00000508500 LENEPQ9Y5L5 61 aa11.11□□□□□ -0.63
LMNA-222ENST00000508500 TRBV6-1A0A0K0K1D8 114 aa11.1□□□□□ -0.63
LMNA-222ENST00000508500 AKR1C3P42330 323 aa11.1□□□□□ -0.63
LMNA-222ENST00000508500 CEBPGP53567 150 aa11.1□□□□□ -0.63
LMNA-222ENST00000508500 RHEBQ15382 184 aa11.1□□□□□ -0.63
LMNA-222ENST00000508500 CLRN3Q8NCR9 226 aa11.1□□□□□ -0.63
LMNA-222ENST00000508500 ZNF479Q96JC4 524 aa11.1□□□□□ -0.63
LMNA-222ENST00000508500 C8orf49Q96NF6 230 aa11.1□□□□□ -0.63
LMNA-222ENST00000508500 PRO0255Q9UI72 69 aa11.1□□□□□ -0.63
LMNA-222ENST00000508500 HHLA3Q9XRX5 114 aa11.1□□□□□ -0.63
LMNA-222ENST00000508500 TRAV8-1A0A0A6YYK1 113 aa11.09□□□□□ -0.63
LMNA-222ENST00000508500 TCRAP04437 139 aa11.09□□□□□ -0.63
LMNA-222ENST00000508500 KRTAP10-2P60368 255 aa11.09□□□□□ -0.63
LMNA-222ENST00000508500 TMEM183BQ1AE95 376 aa11.09□□□□□ -0.63
LMNA-222ENST00000508500 Q6ZRN7 208 aaPredicted RBP11.09□□□□□ -0.63
LMNA-222ENST00000508500 SPATA12Q7Z6I5 190 aa11.09□□□□□ -0.63
LMNA-222ENST00000508500 TMEM183AQ8IXX5 376 aa11.09□□□□□ -0.63
LMNA-222ENST00000508500 FMC1Q96HJ9 113 aa11.09□□□□□ -0.63
LMNA-222ENST00000508500 RPH3ALQ9UNE2 315 aa11.09□□□□□ -0.63
LMNA-222ENST00000508500 ICOSQ9Y6W8 199 aa11.09□□□□□ -0.63
LMNA-222ENST00000508500 A0A087WWC5 75 aa11.08□□□□□ -0.64
LMNA-222ENST00000508500 GNRH2O43555 120 aa11.08□□□□□ -0.64
LMNA-222ENST00000508500 RPL35P42766 123 aaKnown RBP11.08□□□□□ -0.64
LMNA-222ENST00000508500 GNG5P63218 68 aa11.08□□□□□ -0.64
LMNA-222ENST00000508500 TDRG1Q3Y452 100 aa11.08□□□□□ -0.64
LMNA-222ENST00000508500 LYPD5Q6UWN5 251 aa11.08□□□□□ -0.64
LMNA-222ENST00000508500 GOLT1AQ6ZVE7 132 aa11.08□□□□□ -0.64
LMNA-222ENST00000508500 RASL10AQ92737 203 aa11.08□□□□□ -0.64
LMNA-222ENST00000508500 SIVA1O15304 175 aa11.07□□□□□ -0.64
LMNA-222ENST00000508500 NXPH4O95158 308 aa11.07□□□□□ -0.64
LMNA-222ENST00000508500 LINC00315P59091 139 aa11.07□□□□□ -0.64
LMNA-222ENST00000508500 UBE2G1P62253 170 aa11.07□□□□□ -0.64
LMNA-222ENST00000508500 ZNF674Q2M3X9 581 aa11.07□□□□□ -0.64
LMNA-222ENST00000508500 FAM159AQ6UWV7 190 aa11.07□□□□□ -0.64
LMNA-222ENST00000508500 TMEM75Q8N9X5 138 aa11.07□□□□□ -0.64
LMNA-222ENST00000508500 BIN3Q9NQY0 253 aa11.07□□□□□ -0.64
LMNA-222ENST00000508500 TMEM242Q9NWH2 141 aa11.07□□□□□ -0.64
LMNA-222ENST00000508500 TNFRSF18Q9Y5U5 241 aa11.07□□□□□ -0.64
LMNA-222ENST00000508500 M0R036 132 aa11.06□□□□□ -0.64
LMNA-222ENST00000508500 BTF3P20290 206 aaKnown RBP11.06□□□□□ -0.64
LMNA-222ENST00000508500 GNG4P50150 75 aa11.06□□□□□ -0.64
LMNA-222ENST00000508500 SLAQ13239 276 aa11.06□□□□□ -0.64
LMNA-222ENST00000508500 SGK494Q96LW2 274 aa11.06□□□□□ -0.64
LMNA-222ENST00000508500 SPXQ9BT56 116 aa11.06□□□□□ -0.64
LMNA-222ENST00000508500 CTDSP1Q9GZU7 261 aa11.06□□□□□ -0.64
LMNA-222ENST00000508500 TRGV11A0A075B6L2 103 aa11.05□□□□□ -0.64
LMNA-222ENST00000508500 IGHV3-16A0A0C4DH30 117 aa11.05□□□□□ -0.64
LMNA-222ENST00000508500 K7EQD1 137 aa11.05□□□□□ -0.64
LMNA-222ENST00000508500 TYMSP04818 313 aa11.05□□□□□ -0.64
LMNA-222ENST00000508500 RPL23P62829 140 aaKnown RBP11.05□□□□□ -0.64
LMNA-222ENST00000508500 MRPL23Q16540 153 aaKnown RBP11.05□□□□□ -0.64
LMNA-222ENST00000508500 LINC01551Q86U37 167 aa11.05□□□□□ -0.64
LMNA-222ENST00000508500 NAGKQ9UJ70 344 aa11.05□□□□□ -0.64
LMNA-222ENST00000508500 ZFP30Q9Y2G7 519 aa11.05□□□□□ -0.64
LMNA-222ENST00000508500 TRGV4A0A0C4DH28 118 aa11.04□□□□□ -0.64
LMNA-222ENST00000508500 C7orf77A4D0Y5 90 aa11.04□□□□□ -0.64
LMNA-222ENST00000508500 PPP1R2P9O14990 202 aa11.04□□□□□ -0.64
LMNA-222ENST00000508500 ZNF80P51504 273 aaPredicted RBP11.04□□□□□ -0.64
LMNA-222ENST00000508500 ANAPC16Q96DE5 110 aa11.04□□□□□ -0.64
LMNA-222ENST00000508500 DERL1Q9BUN8 251 aa11.04□□□□□ -0.64
LMNA-222ENST00000508500 C11orf21Q9P2W6 132 aa11.04□□□□□ -0.64
LMNA-222ENST00000508500 TRBV20OR9-2A0A075B6H5 130 aa11.03□□□□□ -0.64
LMNA-222ENST00000508500 TRAV21A0A0B4J279 112 aa11.03□□□□□ -0.64
LMNA-222ENST00000508500 MT-ND4LP03901 98 aa11.03□□□□□ -0.64
LMNA-222ENST00000508500 CENPWQ5EE01 88 aa11.03□□□□□ -0.64
LMNA-222ENST00000508500 NEGR1Q7Z3B1 354 aa11.03□□□□□ -0.64
LMNA-222ENST00000508500 BAGE2Q86Y30 109 aa11.03□□□□□ -0.64
LMNA-222ENST00000508500 TRAV4A0A0B4J268 109 aa11.02□□□□□ -0.65
LMNA-222ENST00000508500 LOC100131303A0A0U1RQF7 123 aa11.02□□□□□ -0.65
LMNA-222ENST00000508500 GCGP01275 180 aa11.02□□□□□ -0.65
LMNA-222ENST00000508500 LTAP01374 205 aa11.02□□□□□ -0.65
LMNA-222ENST00000508500 IGLV2-11P01706 119 aa11.02□□□□□ -0.65
LMNA-222ENST00000508500 GYPEP15421 78 aa11.02□□□□□ -0.65
LMNA-222ENST00000508500 FLI1Q01543 452 aaPredicted RBP11.02□□□□□ -0.65
LMNA-222ENST00000508500 ADIRFQ15847 76 aa11.02□□□□□ -0.65
LMNA-222ENST00000508500 SAPCD1Q5SSQ6 148 aa11.02□□□□□ -0.65
LMNA-222ENST00000508500 WFDC10BQ8IUB3 73 aa11.02□□□□□ -0.65
LMNA-222ENST00000508500 OCC1Q8TAD7 63 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms