RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 B4DEV8 164 aa13.72□□□□□ -0.21
SFXN1-209ENST00000508290 RNASE3P12724 160 aaKnown RBP13.72□□□□□ -0.21
SFXN1-209ENST00000508290 SULT1A2P50226 295 aa13.72□□□□□ -0.21
SFXN1-209ENST00000508290 C6orf223Q8N319 242 aa13.72□□□□□ -0.21
SFXN1-209ENST00000508290 FRAS1Q86XX4 4008 aa13.72□□□□□ -0.21
SFXN1-209ENST00000508290 A8MWV9 139 aa13.71□□□□□ -0.21
SFXN1-209ENST00000508290 RS1O15537 224 aa13.71□□□□□ -0.21
SFXN1-209ENST00000508290 ZNF674Q2M3X9 581 aa13.71□□□□□ -0.21
SFXN1-209ENST00000508290 BOLA1Q9Y3E2 137 aa13.71□□□□□ -0.21
SFXN1-209ENST00000508290 A0A1B0GV50 99 aa13.7□□□□□ -0.22
SFXN1-209ENST00000508290 TRBV6-4A0A1B0GX49 114 aa13.7□□□□□ -0.22
SFXN1-209ENST00000508290 K7EQD1 137 aa13.7□□□□□ -0.22
SFXN1-209ENST00000508290 SH2D1AO60880 128 aa13.7□□□□□ -0.22
SFXN1-209ENST00000508290 GYPEP15421 78 aa13.7□□□□□ -0.22
SFXN1-209ENST00000508290 GATA1P15976 413 aaPredicted RBP13.7□□□□□ -0.22
SFXN1-209ENST00000508290 ZNF506Q5JVG8 444 aa13.7□□□□□ -0.22
SFXN1-209ENST00000508290 CFAP126Q5VTH2 177 aa13.7□□□□□ -0.22
SFXN1-209ENST00000508290 KRBOX1C9JBD0 128 aa13.69□□□□□ -0.22
SFXN1-209ENST00000508290 K7EP13 123 aa13.69□□□□□ -0.22
SFXN1-209ENST00000508290 SIVA1O15304 175 aa13.69□□□□□ -0.22
SFXN1-209ENST00000508290 IFNA1P01562 189 aa13.69□□□□□ -0.22
SFXN1-209ENST00000508290 MGST1P10620 155 aaKnown RBP13.69□□□□□ -0.22
SFXN1-209ENST00000508290 TAGLN2P37802 199 aaKnown RBP13.69□□□□□ -0.22
SFXN1-209ENST00000508290 CRIP1P50238 77 aa13.69□□□□□ -0.22
SFXN1-209ENST00000508290 RHOHQ15669 191 aa13.69□□□□□ -0.22
SFXN1-209ENST00000508290 LINC01559Q495D7 138 aa13.69□□□□□ -0.22
SFXN1-209ENST00000508290 LYPD5Q6UWN5 251 aa13.69□□□□□ -0.22
SFXN1-209ENST00000508290 ZFP2Q6ZN57 461 aa13.69□□□□□ -0.22
SFXN1-209ENST00000508290 SYT8Q8NBV8 401 aa13.69□□□□□ -0.22
SFXN1-209ENST00000508290 PRADC1Q9BSG0 188 aa13.69□□□□□ -0.22
SFXN1-209ENST00000508290 GNG13Q9P2W3 67 aa13.69□□□□□ -0.22
SFXN1-209ENST00000508290 SCO2A0A1W2PP80 73 aa13.68□□□□□ -0.22
SFXN1-209ENST00000508290 TIRAPP58753 221 aa13.68□□□□□ -0.22
SFXN1-209ENST00000508290 C11orf52Q96A22 123 aa13.68□□□□□ -0.22
SFXN1-209ENST00000508290 HECTD4Q9Y4D8 3996 aa13.67□□□□□ -0.22
SFXN1-209ENST00000508290 A0A1B0GVY2 172 aa13.67□□□□□ -0.22
SFXN1-209ENST00000508290 PGPEP1LA6NFU8 196 aa13.67□□□□□ -0.22
SFXN1-209ENST00000508290 NXPH4O95158 308 aa13.67□□□□□ -0.22
SFXN1-209ENST00000508290 BAGE2Q86Y30 109 aa13.67□□□□□ -0.22
SFXN1-209ENST00000508290 CXCL1P09341 107 aa13.66□□□□□ -0.22
SFXN1-209ENST00000508290 MLST8Q9BVC4 326 aa13.66□□□□□ -0.22
SFXN1-209ENST00000508290 TRAV9-2A0A087WT02 112 aa13.65□□□□□ -0.22
SFXN1-209ENST00000508290 M0R036 132 aa13.65□□□□□ -0.22
SFXN1-209ENST00000508290 RHODO00212 210 aa13.65□□□□□ -0.22
SFXN1-209ENST00000508290 PDE6DO43924 150 aa13.65□□□□□ -0.22
SFXN1-209ENST00000508290 ARMS2P0C7Q2 107 aa13.65□□□□□ -0.22
SFXN1-209ENST00000508290 MED14OSP0DP75 135 aa13.65□□□□□ -0.22
SFXN1-209ENST00000508290 C9orf62Q8N4C0 152 aa13.65□□□□□ -0.22
SFXN1-209ENST00000508290 SLC25A29Q8N8R3 303 aa13.65□□□□□ -0.22
SFXN1-209ENST00000508290 SMIM12Q96EX1 92 aa13.65□□□□□ -0.22
SFXN1-209ENST00000508290 PHLDA3Q9Y5J5 127 aa13.65□□□□□ -0.22
SFXN1-209ENST00000508290 hCG_2014768A0A024R1R8 64 aa13.64□□□□□ -0.23
SFXN1-209ENST00000508290 H3BVH4 76 aa13.64□□□□□ -0.23
SFXN1-209ENST00000508290 MEF2BQ02080 365 aaPredicted RBP13.64□□□□□ -0.23
SFXN1-209ENST00000508290 NHLRC2Q8NBF2 726 aa13.64□□□□□ -0.23
SFXN1-209ENST00000508290 PARLQ9H300 379 aa13.64□□□□□ -0.23
SFXN1-209ENST00000508290 DNAH2Q9P225 4427 aa13.63□□□□□ -0.23
SFXN1-209ENST00000508290 RPL35P42766 123 aaKnown RBP13.63□□□□□ -0.23
SFXN1-209ENST00000508290 CCL20P78556 96 aa13.63□□□□□ -0.23
SFXN1-209ENST00000508290 ZFP82Q8N141 532 aa13.63□□□□□ -0.23
SFXN1-209ENST00000508290 SCRT2Q9NQ03 307 aa13.63□□□□□ -0.23
SFXN1-209ENST00000508290 LY96Q9Y6Y9 160 aa13.62□□□□□ -0.23
SFXN1-209ENST00000508290 BCL2P10415 239 aa13.61□□□□□ -0.23
SFXN1-209ENST00000508290 KRTAP1-5Q9BYS1 174 aa13.61□□□□□ -0.23
SFXN1-209ENST00000508290 VAX2Q9UIW0 290 aa13.61□□□□□ -0.23
SFXN1-209ENST00000508290 GRIFINA4D1Z8 144 aa13.6□□□□□ -0.23
SFXN1-209ENST00000508290 EVI2AP22794 236 aa13.6□□□□□ -0.23
SFXN1-209ENST00000508290 BIN3Q9NQY0 253 aa13.6□□□□□ -0.23
SFXN1-209ENST00000508290 IGHV3-73A0A0B4J1V6 119 aa13.59□□□□□ -0.23
SFXN1-209ENST00000508290 DNAH10OSP0CZ25 163 aa13.59□□□□□ -0.23
SFXN1-209ENST00000508290 DMRTA1Q5VZB9 504 aa13.59□□□□□ -0.23
SFXN1-209ENST00000508290 NFE4Q86UQ8 179 aa13.59□□□□□ -0.23
SFXN1-209ENST00000508290 C10orf126Q8N4M7 172 aa13.59□□□□□ -0.23
SFXN1-209ENST00000508290 SFRP2Q96HF1 295 aa13.59□□□□□ -0.23
SFXN1-209ENST00000508290 FAT2Q9NYQ8 4349 aa13.59□□□□□ -0.23
SFXN1-209ENST00000508290 TMSB15BA0A087X1C1 80 aa13.58□□□□□ -0.24
SFXN1-209ENST00000508290 LOC100131303A0A0U1RQF7 123 aa13.58□□□□□ -0.24
SFXN1-209ENST00000508290 BLOC1S1P78537 153 aa13.58□□□□□ -0.24
SFXN1-209ENST00000508290 CENPWQ5EE01 88 aa13.58□□□□□ -0.24
SFXN1-209ENST00000508290 UFSP1Q6NVU6 142 aa13.58□□□□□ -0.24
SFXN1-209ENST00000508290 DNAH17Q9UFH2 4485 aa13.58□□□□□ -0.24
SFXN1-209ENST00000508290 TRAV8-6A0A0B4J262 113 aa13.57□□□□□ -0.24
SFXN1-209ENST00000508290 GNG4P50150 75 aa13.57□□□□□ -0.24
SFXN1-209ENST00000508290 PRR27Q6MZM9 219 aa13.57□□□□□ -0.24
SFXN1-209ENST00000508290 ZNF575Q86XF7 245 aa13.57□□□□□ -0.24
SFXN1-209ENST00000508290 M0R381 172 aa13.56□□□□□ -0.24
SFXN1-209ENST00000508290 OR5AL1P0C617 328 aa13.56□□□□□ -0.24
SFXN1-209ENST00000508290 LINC00315P59091 139 aa13.56□□□□□ -0.24
SFXN1-209ENST00000508290 RPS20P60866 119 aaKnown RBP13.56□□□□□ -0.24
SFXN1-209ENST00000508290 TNP2Q05952 138 aa13.56□□□□□ -0.24
SFXN1-209ENST00000508290 ATP6V0E2Q8NHE4 81 aa13.56□□□□□ -0.24
SFXN1-209ENST00000508290 DAZAP1Q96EP5 407 aaKnown RBP13.56□□□□□ -0.24
SFXN1-209ENST00000508290 DERL1Q9BUN8 251 aa13.56□□□□□ -0.24
SFXN1-209ENST00000508290 SSBP4Q9BWG4 385 aaPredicted RBP13.56□□□□□ -0.24
SFXN1-209ENST00000508290 GTSF1LQ9H1H1 148 aa13.56□□□□□ -0.24
SFXN1-209ENST00000508290 MED9Q9NWA0 146 aa13.56□□□□□ -0.24
SFXN1-209ENST00000508290 SNAI2O43623 268 aa13.55□□□□□ -0.24
SFXN1-209ENST00000508290 LELP1Q5T871 98 aa13.55□□□□□ -0.24
SFXN1-209ENST00000508290 WFDC10BQ8IUB3 73 aa13.55□□□□□ -0.24
SFXN1-209ENST00000508290 A0A087WWC5 75 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms