RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 ERG28Q9UKR5 140 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 BLMP54132 1417 aaPredicted RBP0.44□□□□□ -2.34
SMN2-208ENST00000508258 MYOM3Q5VTT5 1437 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 DLEC1Q9Y238 1755 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 ZNF142P52746 1687 aaPredicted RBP0.43□□□□□ -2.34
SMN2-208ENST00000508258 FBN3Q75N90 2809 aa0.43□□□□□ -2.34
SMN2-208ENST00000508258 TRAV17A0A0B4J275 112 aa0.43□□□□□ -2.34
SMN2-208ENST00000508258 K7ERU9 68 aa0.43□□□□□ -2.34
SMN2-208ENST00000508258 M0R129 80 aa0.43□□□□□ -2.34
SMN2-208ENST00000508258 CAV3P56539 151 aa0.43□□□□□ -2.34
SMN2-208ENST00000508258 IQCJQ1A5X6 159 aa0.43□□□□□ -2.34
SMN2-208ENST00000508258 Q86TA4 180 aa0.43□□□□□ -2.34
SMN2-208ENST00000508258 NDUFA11Q86Y39 141 aa0.43□□□□□ -2.34
SMN2-208ENST00000508258 ATOH7Q8N100 152 aa0.43□□□□□ -2.34
SMN2-208ENST00000508258 LINC00208Q96KT6 92 aa0.43□□□□□ -2.34
SMN2-208ENST00000508258 SAR1AQ9NR31 198 aa0.43□□□□□ -2.34
SMN2-208ENST00000508258 KMT2BQ9UMN6 2715 aaPredicted RBP0.43□□□□□ -2.34
SMN2-208ENST00000508258 GRIN2AQ12879 1464 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 TENM1Q9UKZ4 2725 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 CCDC179H3BU77 68 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 CCKP06307 115 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 PRB4P10163 310 aaPredicted RBP0.42□□□□□ -2.34
SMN2-208ENST00000508258 SLC25A6P12236 298 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 COPZ1P61923 177 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 CCDC58Q4VC31 144 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 LINC01545Q5VT33 79 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 MIC13Q5XKP0 118 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 Q6ZUT4 128 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 VSTM2AQ8TAG5 236 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 PLAC4Q8WY50 150 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 SDF2Q99470 211 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 FAM107BQ9H098 131 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 KIF13AQ9H1H9 1805 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 TMEM2Q9UHN6 1383 aa0.42□□□□□ -2.34
SMN2-208ENST00000508258 ZGRF1Q86YA3 2104 aa0.41□□□□□ -2.34
SMN2-208ENST00000508258 ATG2AQ2TAZ0 1938 aa0.41□□□□□ -2.34
SMN2-208ENST00000508258 TEX49A0A1B0GTD5 131 aa0.41□□□□□ -2.34
SMN2-208ENST00000508258 K7EP13 123 aa0.41□□□□□ -2.34
SMN2-208ENST00000508258 TFF1P04155 84 aa0.41□□□□□ -2.34
SMN2-208ENST00000508258 SARNPP82979 210 aaKnown RBP0.41□□□□□ -2.34
SMN2-208ENST00000508258 KLKP1Q107X0 134 aa0.41□□□□□ -2.34
SMN2-208ENST00000508258 OR2T2Q6IF00 324 aa0.41□□□□□ -2.34
SMN2-208ENST00000508258 SCIMPQ6UWF3 145 aa0.41□□□□□ -2.34
SMN2-208ENST00000508258 VPS25Q9BRG1 176 aa0.41□□□□□ -2.34
SMN2-208ENST00000508258 TMEM191AQ9H0A3 160 aa0.41□□□□□ -2.34
SMN2-208ENST00000508258 LAMB1P07942 1786 aa0.41□□□□□ -2.34
SMN2-208ENST00000508258 PHLPP1O60346 1717 aa0.41□□□□□ -2.34
SMN2-208ENST00000508258 AFDNP55196 1824 aaKnown RBP0.41□□□□□ -2.34
SMN2-208ENST00000508258 MUC22E2RYF6 1773 aaPredicted RBP0.4□□□□□ -2.35
SMN2-208ENST00000508258 A0A0D9SG42 100 aa0.4□□□□□ -2.35
SMN2-208ENST00000508258 LY6G6CO95867 125 aa0.4□□□□□ -2.35
SMN2-208ENST00000508258 PYYP10082 97 aa0.4□□□□□ -2.35
SMN2-208ENST00000508258 GUCA1AP43080 201 aaPredicted RBP0.4□□□□□ -2.35
SMN2-208ENST00000508258 RRAS2P62070 204 aaPredicted RBP0.4□□□□□ -2.35
SMN2-208ENST00000508258 SPCS2Q15005 226 aa0.4□□□□□ -2.35
SMN2-208ENST00000508258 ZNF56Q15929 161 aa0.4□□□□□ -2.35
SMN2-208ENST00000508258 SPINK9Q5DT21 86 aa0.4□□□□□ -2.35
SMN2-208ENST00000508258 IFI27L1Q96BM0 104 aa0.4□□□□□ -2.35
SMN2-208ENST00000508258 NDUFA12Q9UI09 145 aa0.4□□□□□ -2.35
SMN2-208ENST00000508258 BCORL1Q5H9F3 1711 aa0.4□□□□□ -2.35
SMN2-208ENST00000508258 AKAP11Q9UKA4 1901 aa0.4□□□□□ -2.35
SMN2-208ENST00000508258 MYH13Q9UKX3 1938 aa0.4□□□□□ -2.35
SMN2-208ENST00000508258 MYH6P13533 1939 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 A0A096LNT2 108 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 FXYD1O00168 92 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 APOC1P02654 83 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 PIRTP0C851 137 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 SPINT3P49223 89 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 NPC2P61916 151 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 RPL37P61927 97 aaKnown RBP0.39□□□□□ -2.35
SMN2-208ENST00000508258 SELENOWP63302 87 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 SPINK13Q1W4C9 94 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 SPANXN1Q5VSR9 72 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 TSKUQ8WUA8 353 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 DPH3Q96FX2 82 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 TSC22D3Q99576 134 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 LINC00470Q9BZP3 86 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 TMEM14BQ9NUH8 114 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 BCL9LQ86UU0 1499 aa0.39□□□□□ -2.35
SMN2-208ENST00000508258 MAP2P11137 1827 aaKnown RBP0.38□□□□□ -2.35
SMN2-208ENST00000508258 FOCADQ5VW36 1801 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 SNRNP200O75643 2136 aaKnown RBP0.38□□□□□ -2.35
SMN2-208ENST00000508258 TRAV12-2A0A075B6T6 113 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 TRAV12-3A0A0B4J271 114 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 TCRBV3S1A0A5B6 114 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 ZNF137PP52743 207 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 FXYD6P3P58550 94 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 EMX2Q04743 252 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 C9orf116Q5BN46 136 aaPredicted RBP0.38□□□□□ -2.35
SMN2-208ENST00000508258 SLC48A1Q6P1K1 146 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 CYP2G1PQ6ZSU1 146 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 C1orf54Q8WWF1 131 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 ARL11Q969Q4 196 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 TMEM141Q96I45 108 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 PSMG3Q9BT73 122 aaPredicted RBP0.38□□□□□ -2.35
SMN2-208ENST00000508258 C10orf95Q9H7T3 257 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 CCDC167Q9P0B6 97 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 ASCC3Q8N3C0 2202 aaKnown RBP0.38□□□□□ -2.35
SMN2-208ENST00000508258 DAPK1P53355 1430 aa0.38□□□□□ -2.35
SMN2-208ENST00000508258 MBD5Q9P267 1494 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms