RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 NXPH4O95158 308 aa8.11□□□□□ -1.11
PDLIM5-210ENST00000508216 LGALS3P17931 250 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-210ENST00000508216 KTN1-AS1Q86SY8 53 aa8.11□□□□□ -1.11
PDLIM5-210ENST00000508216 ZNF575Q86XF7 245 aa8.11□□□□□ -1.11
PDLIM5-210ENST00000508216 RBM12B-AS1Q9P1G2 102 aa8.11□□□□□ -1.11
PDLIM5-210ENST00000508216 MOB4Q9Y3A3 225 aa8.11□□□□□ -1.11
PDLIM5-210ENST00000508216 HTTP42858 3142 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 TMEM30CPA0ZSE6 113 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 NDUFB3O43676 98 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 MAGEA5P43359 124 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 SS18Q15532 418 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 KHDC1LQ5JSQ8 128 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 S100A7L2Q5SY68 101 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 PRNTQ86SH4 94 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 C17orf82Q86X59 251 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 VCANP13611 3396 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 IGHV1-45A0A0A0MS14 117 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 PRSS2P07478 247 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 C20orf197Q8N268 126 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 DEFB123Q8N688 67 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 PSMG3-AS1Q96PY0 264 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 SCGB3A1Q96QR1 104 aa8.1□□□□□ -1.11
PDLIM5-210ENST00000508216 ABCA7Q8IZY2 2146 aa8.09□□□□□ -1.11
PDLIM5-210ENST00000508216 C12orf77C9JDV5 145 aa8.09□□□□□ -1.11
PDLIM5-210ENST00000508216 H3BTX0 84 aa8.09□□□□□ -1.11
PDLIM5-210ENST00000508216 MUSTN1Q8IVN3 82 aa8.09□□□□□ -1.11
PDLIM5-210ENST00000508216 KLHL30-AS1Q8NEE0 82 aa8.09□□□□□ -1.11
PDLIM5-210ENST00000508216 LINC00474Q9P2X8 69 aa8.09□□□□□ -1.11
PDLIM5-210ENST00000508216 IGIPA6NJ69 53 aa8.08□□□□□ -1.12
PDLIM5-210ENST00000508216 J3QT63 122 aa8.08□□□□□ -1.12
PDLIM5-210ENST00000508216 SPRY2O43597 315 aa8.08□□□□□ -1.12
PDLIM5-210ENST00000508216 IGLV1-40P01703 118 aa8.08□□□□□ -1.12
PDLIM5-210ENST00000508216 FKBP1BP68106 108 aa8.08□□□□□ -1.12
PDLIM5-210ENST00000508216 PVRIGQ6DKI7 326 aa8.08□□□□□ -1.12
PDLIM5-210ENST00000508216 PHPT1Q9NRX4 125 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-210ENST00000508216 KIAA0100Q14667 2235 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-210ENST00000508216 IGLV4-69A0A075B6H9 119 aa8.07□□□□□ -1.12
PDLIM5-210ENST00000508216 LEPROTO15243 131 aa8.07□□□□□ -1.12
PDLIM5-210ENST00000508216 APOC4P55056 127 aa8.07□□□□□ -1.12
PDLIM5-210ENST00000508216 C14orf178Q8N769 122 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-210ENST00000508216 C11orf45Q8TAV5 145 aa8.07□□□□□ -1.12
PDLIM5-210ENST00000508216 CENPFP49454 3210 aa8.07□□□□□ -1.12
PDLIM5-210ENST00000508216 IGKV1D-37A0A075B6S9 117 aa8.07□□□□□ -1.12
PDLIM5-210ENST00000508216 LYRM9A8MSI8 78 aa8.07□□□□□ -1.12
PDLIM5-210ENST00000508216 I3L3M4 83 aa8.07□□□□□ -1.12
PDLIM5-210ENST00000508216 RBM3P98179 157 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-210ENST00000508216 ZNF826PQ6ZT77 177 aa8.07□□□□□ -1.12
PDLIM5-210ENST00000508216 C11orf44Q8N8P7 122 aa8.07□□□□□ -1.12
PDLIM5-210ENST00000508216 SMIM2Q9BVW6 85 aa8.07□□□□□ -1.12
PDLIM5-210ENST00000508216 TRBV27A0A0K0K1C4 114 aa8.06□□□□□ -1.12
PDLIM5-210ENST00000508216 EFNA2O43921 213 aa8.06□□□□□ -1.12
PDLIM5-210ENST00000508216 TSPEAR-AS2P59090 65 aa8.06□□□□□ -1.12
PDLIM5-210ENST00000508216 IMMP1LQ96LU5 166 aa8.06□□□□□ -1.12
PDLIM5-210ENST00000508216 OBSCN-AS1Q96MR7 158 aa8.06□□□□□ -1.12
PDLIM5-210ENST00000508216 COX7A2LO14548 114 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 HES7Q9BYE0 225 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 KNTC1P50748 2209 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 DIDO1Q9BTC0 2240 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 FER1L5A0AVI2 2057 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 LAMA3Q16787 3333 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 MED12Q93074 2177 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 IGKV3D-11A0A0A0MRZ8 115 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 TRAV8-3A0A0A6YYJ7 113 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 ADM5C9JUS6 153 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 E7EUB6 86 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 H7C2G1 150 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 NDUFS5O43920 106 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 SH2D1AO60880 128 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 PROP1O75360 226 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 VMO1Q7Z5L0 202 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 C6orf223Q8N319 242 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 LY6G5BQ8NDX9 201 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 CLEC2BQ92478 149 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 C22orf24Q9Y442 160 aa8.05□□□□□ -1.12
PDLIM5-210ENST00000508216 IGHV4-4A0A075B6R2 117 aa8.04□□□□□ -1.12
PDLIM5-210ENST00000508216 M0R3E3 92 aa8.04□□□□□ -1.12
PDLIM5-210ENST00000508216 WDR86Q86TI4 376 aa8.04□□□□□ -1.12
PDLIM5-210ENST00000508216 IGHV1OR15-9A0A0B4J2B8 117 aa8.03□□□□□ -1.12
PDLIM5-210ENST00000508216 IGHV5-51A0A0C4DH38 117 aa8.03□□□□□ -1.12
PDLIM5-210ENST00000508216 H3BS24 57 aa8.03□□□□□ -1.12
PDLIM5-210ENST00000508216 DNAL4O96015 105 aa8.03□□□□□ -1.12
PDLIM5-210ENST00000508216 DAD1P61803 113 aa8.03□□□□□ -1.12
PDLIM5-210ENST00000508216 Q1T7F1 81 aa8.03□□□□□ -1.12
PDLIM5-210ENST00000508216 TMEM61Q8N0U2 210 aa8.03□□□□□ -1.12
PDLIM5-210ENST00000508216 TMEM141Q96I45 108 aa8.03□□□□□ -1.12
PDLIM5-210ENST00000508216 DEFB127Q9H1M4 99 aa8.03□□□□□ -1.12
PDLIM5-210ENST00000508216 CTSZQ9UBR2 303 aa8.03□□□□□ -1.12
PDLIM5-210ENST00000508216 Q9Y3F1 56 aa8.03□□□□□ -1.12
PDLIM5-210ENST00000508216 CACNA1AO00555 2505 aa8.03□□□□□ -1.12
PDLIM5-210ENST00000508216 ZNF407Q9C0G0 2248 aa8.03□□□□□ -1.12
PDLIM5-210ENST00000508216 VPREB1P12018 145 aa8.02□□□□□ -1.13
PDLIM5-210ENST00000508216 ZNF32P17041 273 aa8.02□□□□□ -1.13
PDLIM5-210ENST00000508216 CD52P31358 61 aa8.02□□□□□ -1.13
PDLIM5-210ENST00000508216 ZNF80P51504 273 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-210ENST00000508216 ESRGQ1W209 222 aa8.02□□□□□ -1.13
PDLIM5-210ENST00000508216 INTS1Q8N201 2190 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-210ENST00000508216 A0A0J9YXY3 114 aa8.02□□□□□ -1.13
PDLIM5-210ENST00000508216 LITAFQ99732 161 aa8.02□□□□□ -1.13
PDLIM5-210ENST00000508216 ESPL1Q14674 2120 aa8.01□□□□□ -1.13
PDLIM5-210ENST00000508216 A0A087WVE0 104 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms