RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 ZNF876PQ49A33 203 aa12.69□□□□□ -0.38
NPHP4-210ENST00000506941 VSIG2Q96IQ7 327 aa12.69□□□□□ -0.38
NPHP4-210ENST00000506941 TRAV4A0A0B4J268 109 aa12.68□□□□□ -0.38
NPHP4-210ENST00000506941 TMEM250H0YL14 139 aa12.68□□□□□ -0.38
NPHP4-210ENST00000506941 S100A4P26447 101 aaKnown RBP12.68□□□□□ -0.38
NPHP4-210ENST00000506941 IL36BQ9NZH7 164 aa12.68□□□□□ -0.38
NPHP4-210ENST00000506941 NUDT3O95989 172 aa12.67□□□□□ -0.38
NPHP4-210ENST00000506941 MGST1P10620 155 aaKnown RBP12.67□□□□□ -0.38
NPHP4-210ENST00000506941 PTH2Q96A98 100 aa12.67□□□□□ -0.38
NPHP4-210ENST00000506941 SMIM12Q96EX1 92 aa12.67□□□□□ -0.38
NPHP4-210ENST00000506941 EIF5A2Q9GZV4 153 aaKnown RBP12.67□□□□□ -0.38
NPHP4-210ENST00000506941 PARLQ9H300 379 aa12.67□□□□□ -0.38
NPHP4-210ENST00000506941 ARMS2P0C7Q2 107 aa12.66□□□□□ -0.38
NPHP4-210ENST00000506941 P0DMU3 169 aa12.66□□□□□ -0.38
NPHP4-210ENST00000506941 FAM231AP0DMU4 169 aa12.66□□□□□ -0.38
NPHP4-210ENST00000506941 FAM231CP0DMU5 169 aa12.66□□□□□ -0.38
NPHP4-210ENST00000506941 OR4C5Q8NGB2 326 aa12.66□□□□□ -0.38
NPHP4-210ENST00000506941 C19orf71A6NCJ1 209 aa12.65□□□□□ -0.38
NPHP4-210ENST00000506941 H3BNG1 76 aa12.65□□□□□ -0.38
NPHP4-210ENST00000506941 CFAP126Q5VTH2 177 aa12.65□□□□□ -0.38
NPHP4-210ENST00000506941 SCRT2Q9NQ03 307 aa12.65□□□□□ -0.38
NPHP4-210ENST00000506941 TRGV4A0A0C4DH28 118 aa12.64□□□□□ -0.39
NPHP4-210ENST00000506941 K7EN84 100 aa12.64□□□□□ -0.39
NPHP4-210ENST00000506941 RS1O15537 224 aa12.64□□□□□ -0.39
NPHP4-210ENST00000506941 CRYBA4P53673 196 aa12.64□□□□□ -0.39
NPHP4-210ENST00000506941 PRO0255Q9UI72 69 aa12.64□□□□□ -0.39
NPHP4-210ENST00000506941 HHLA3Q9XRX5 114 aa12.64□□□□□ -0.39
NPHP4-210ENST00000506941 PAX4O43316 350 aa12.63□□□□□ -0.39
NPHP4-210ENST00000506941 NDUFS6O75380 124 aaKnown RBP12.63□□□□□ -0.39
NPHP4-210ENST00000506941 SRP19P09132 144 aaKnown RBP12.63□□□□□ -0.39
NPHP4-210ENST00000506941 CXCL1P09341 107 aa12.63□□□□□ -0.39
NPHP4-210ENST00000506941 CEBPGP53567 150 aa12.63□□□□□ -0.39
NPHP4-210ENST00000506941 DMRTA1Q5VZB9 504 aa12.63□□□□□ -0.39
NPHP4-210ENST00000506941 OCC1Q8TAD7 63 aa12.63□□□□□ -0.39
NPHP4-210ENST00000506941 A0A096LPF7 62 aa12.62□□□□□ -0.39
NPHP4-210ENST00000506941 PIK3CD-AS1Q5SR53 167 aa12.62□□□□□ -0.39
NPHP4-210ENST00000506941 JPT2Q9H910 190 aa12.62□□□□□ -0.39
NPHP4-210ENST00000506941 FRAS1Q86XX4 4008 aa12.61□□□□□ -0.39
NPHP4-210ENST00000506941 DNAH10Q8IVF4 4471 aa12.61□□□□□ -0.39
NPHP4-210ENST00000506941 C9JQL5 133 aa12.61□□□□□ -0.39
NPHP4-210ENST00000506941 MED14OSP0DP75 135 aa12.61□□□□□ -0.39
NPHP4-210ENST00000506941 GATA1P15976 413 aaPredicted RBP12.61□□□□□ -0.39
NPHP4-210ENST00000506941 SRSF3P84103 164 aaKnown RBP12.61□□□□□ -0.39
NPHP4-210ENST00000506941 SLAQ13239 276 aa12.61□□□□□ -0.39
NPHP4-210ENST00000506941 UBE2DNLQ8IWF7 75 aa12.61□□□□□ -0.39
NPHP4-210ENST00000506941 DAZAP1Q96EP5 407 aaKnown RBP12.61□□□□□ -0.39
NPHP4-210ENST00000506941 PHLDA3Q9Y5J5 127 aa12.61□□□□□ -0.39
NPHP4-210ENST00000506941 IGHV3-73A0A0B4J1V6 119 aa12.6□□□□□ -0.39
NPHP4-210ENST00000506941 GZMBP10144 247 aa12.6□□□□□ -0.39
NPHP4-210ENST00000506941 RNF212Q495C1 297 aa12.6□□□□□ -0.39
NPHP4-210ENST00000506941 OR2D3Q8NGH3 330 aa12.6□□□□□ -0.39
NPHP4-210ENST00000506941 SMIM7Q9BQ49 75 aa12.6□□□□□ -0.39
NPHP4-210ENST00000506941 SSBP4Q9BWG4 385 aaPredicted RBP12.6□□□□□ -0.39
NPHP4-210ENST00000506941 SAMD10Q9BYL1 202 aa12.6□□□□□ -0.39
NPHP4-210ENST00000506941 BIN3Q9NQY0 253 aa12.6□□□□□ -0.39
NPHP4-210ENST00000506941 DNAH2Q9P225 4427 aa12.59□□□□□ -0.39
NPHP4-210ENST00000506941 A8MWV9 139 aa12.59□□□□□ -0.39
NPHP4-210ENST00000506941 M0R381 172 aa12.59□□□□□ -0.39
NPHP4-210ENST00000506941 SNAI2O43623 268 aa12.59□□□□□ -0.39
NPHP4-210ENST00000506941 NXPH4O95158 308 aa12.59□□□□□ -0.39
NPHP4-210ENST00000506941 P01737 135 aa12.59□□□□□ -0.39
NPHP4-210ENST00000506941 UFSP1Q6NVU6 142 aa12.59□□□□□ -0.39
NPHP4-210ENST00000506941 SYT8Q8NBV8 401 aa12.59□□□□□ -0.39
NPHP4-210ENST00000506941 NUDT10Q8NFP7 164 aa12.59□□□□□ -0.39
NPHP4-210ENST00000506941 OR10AG1Q8NH19 301 aa12.59□□□□□ -0.39
NPHP4-210ENST00000506941 NUDT11Q96G61 164 aa12.59□□□□□ -0.39
NPHP4-210ENST00000506941 RNASE7Q9H1E1 156 aaKnown RBP12.59□□□□□ -0.39
NPHP4-210ENST00000506941 LINC00588Q9Y4M8 146 aa12.59□□□□□ -0.39
NPHP4-210ENST00000506941 LOC100131303A0A0U1RQF7 123 aa12.58□□□□□ -0.4
NPHP4-210ENST00000506941 OR5AL1P0C617 328 aa12.58□□□□□ -0.4
NPHP4-210ENST00000506941 IFITM2Q01629 132 aa12.58□□□□□ -0.4
NPHP4-210ENST00000506941 ZFP82Q8N141 532 aa12.58□□□□□ -0.4
NPHP4-210ENST00000506941 ICOSQ9Y6W8 199 aa12.58□□□□□ -0.4
NPHP4-210ENST00000506941 MUC21A0A0G2JKD1 596 aa12.57□□□□□ -0.4
NPHP4-210ENST00000506941 MUC21A0A140T8X8 626 aa12.57□□□□□ -0.4
NPHP4-210ENST00000506941 K7EQD1 137 aa12.57□□□□□ -0.4
NPHP4-210ENST00000506941 IGLC6P0CF74 106 aa12.57□□□□□ -0.4
NPHP4-210ENST00000506941 GYPEP15421 78 aa12.57□□□□□ -0.4
NPHP4-210ENST00000506941 ESRGQ1W209 222 aa12.57□□□□□ -0.4
NPHP4-210ENST00000506941 ZFP2Q6ZN57 461 aa12.57□□□□□ -0.4
NPHP4-210ENST00000506941 Q6ZSN1 163 aa12.57□□□□□ -0.4
NPHP4-210ENST00000506941 SLC25A29Q8N8R3 303 aa12.57□□□□□ -0.4
NPHP4-210ENST00000506941 SFRP2Q96HF1 295 aa12.57□□□□□ -0.4
NPHP4-210ENST00000506941 LY96Q9Y6Y9 160 aa12.57□□□□□ -0.4
NPHP4-210ENST00000506941 ZNF727A8MUV8 499 aa12.56□□□□□ -0.4
NPHP4-210ENST00000506941 CIDEAO60543 219 aa12.56□□□□□ -0.4
NPHP4-210ENST00000506941 CCL18P55774 89 aa12.56□□□□□ -0.4
NPHP4-210ENST00000506941 RPS20P60866 119 aaKnown RBP12.56□□□□□ -0.4
NPHP4-210ENST00000506941 PEA15Q15121 130 aa12.55□□□□□ -0.4
NPHP4-210ENST00000506941 MRPL23Q16540 153 aaKnown RBP12.55□□□□□ -0.4
NPHP4-210ENST00000506941 LINC01551Q86U37 167 aa12.55□□□□□ -0.4
NPHP4-210ENST00000506941 RPP21Q9H633 154 aaKnown RBP12.55□□□□□ -0.4
NPHP4-210ENST00000506941 A0A087WWL8 130 aa12.54□□□□□ -0.4
NPHP4-210ENST00000506941 TRBV6-4A0A1B0GX49 114 aa12.54□□□□□ -0.4
NPHP4-210ENST00000506941 CRYGDP07320 174 aa12.54□□□□□ -0.4
NPHP4-210ENST00000506941 FAM74A4Q5TZK3 123 aa12.54□□□□□ -0.4
NPHP4-210ENST00000506941 FER1L6-AS1Q8NA97 138 aa12.54□□□□□ -0.4
NPHP4-210ENST00000506941 ZNRF2Q8NHG8 242 aa12.54□□□□□ -0.4
NPHP4-210ENST00000506941 IGLV2-18A0A075B6J9 118 aa12.53□□□□□ -0.4
NPHP4-210ENST00000506941 FAM3BP58499 235 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms