RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 PAX4O43316 350 aa9.12□□□□□ -0.95
TCOF1-209ENST00000506630 BCL2P10415 239 aa9.12□□□□□ -0.95
TCOF1-209ENST00000506630 RNASE3P12724 160 aaKnown RBP9.12□□□□□ -0.95
TCOF1-209ENST00000506630 ASIPP42127 132 aa9.12□□□□□ -0.95
TCOF1-209ENST00000506630 RPL35P42766 123 aaKnown RBP9.12□□□□□ -0.95
TCOF1-209ENST00000506630 CRIP1P50238 77 aa9.12□□□□□ -0.95
TCOF1-209ENST00000506630 CCL18P55774 89 aa9.12□□□□□ -0.95
TCOF1-209ENST00000506630 MEF2BQ02080 365 aaPredicted RBP9.12□□□□□ -0.95
TCOF1-209ENST00000506630 FHL2Q14192 279 aa9.12□□□□□ -0.95
TCOF1-209ENST00000506630 ZNF674Q2M3X9 581 aa9.12□□□□□ -0.95
TCOF1-209ENST00000506630 ZNF876PQ49A33 203 aa9.12□□□□□ -0.95
TCOF1-209ENST00000506630 BAGE2Q86Y30 109 aa9.12□□□□□ -0.95
TCOF1-209ENST00000506630 VSIG2Q96IQ7 327 aa9.12□□□□□ -0.95
TCOF1-209ENST00000506630 PRO0255Q9UI72 69 aa9.12□□□□□ -0.95
TCOF1-209ENST00000506630 PKD1P98161 4303 aa9.11□□□□□ -0.95
TCOF1-209ENST00000506630 DYNC1H1Q14204 4646 aaKnown RBP9.11□□□□□ -0.95
TCOF1-209ENST00000506630 TMSB15BA0A087X1C1 80 aa9.11□□□□□ -0.95
TCOF1-209ENST00000506630 H3BNG1 76 aa9.11□□□□□ -0.95
TCOF1-209ENST00000506630 H3BVH4 76 aa9.11□□□□□ -0.95
TCOF1-209ENST00000506630 M0R2N4 97 aa9.11□□□□□ -0.95
TCOF1-209ENST00000506630 BLOC1S1P78537 153 aa9.11□□□□□ -0.95
TCOF1-209ENST00000506630 SLAQ13239 276 aa9.11□□□□□ -0.95
TCOF1-209ENST00000506630 C11orf52Q96A22 123 aa9.11□□□□□ -0.95
TCOF1-209ENST00000506630 DERL1Q9BUN8 251 aa9.11□□□□□ -0.95
TCOF1-209ENST00000506630 HHLA3Q9XRX5 114 aa9.11□□□□□ -0.95
TCOF1-209ENST00000506630 GRIFINA4D1Z8 144 aa9.1□□□□□ -0.95
TCOF1-209ENST00000506630 PGPEP1LA6NFU8 196 aa9.1□□□□□ -0.95
TCOF1-209ENST00000506630 KRBOX1C9JBD0 128 aa9.1□□□□□ -0.95
TCOF1-209ENST00000506630 PDE6DO43924 150 aa9.1□□□□□ -0.95
TCOF1-209ENST00000506630 CRYBA4P53673 196 aa9.1□□□□□ -0.95
TCOF1-209ENST00000506630 ZNF506Q5JVG8 444 aa9.1□□□□□ -0.95
TCOF1-209ENST00000506630 PRR27Q6MZM9 219 aa9.1□□□□□ -0.95
TCOF1-209ENST00000506630 VAX2Q9UIW0 290 aa9.1□□□□□ -0.95
TCOF1-209ENST00000506630 LINC00588Q9Y4M8 146 aa9.1□□□□□ -0.95
TCOF1-209ENST00000506630 ICOSQ9Y6W8 199 aa9.1□□□□□ -0.95
TCOF1-209ENST00000506630 A0A096LPF7 62 aa9.09□□□□□ -0.95
TCOF1-209ENST00000506630 FAM3BP58499 235 aaPredicted RBP9.09□□□□□ -0.95
TCOF1-209ENST00000506630 CENPWQ5EE01 88 aa9.09□□□□□ -0.95
TCOF1-209ENST00000506630 PCNPQ8WW12 178 aaKnown RBP9.09□□□□□ -0.95
TCOF1-209ENST00000506630 MLST8Q9BVC4 326 aa9.09□□□□□ -0.95
TCOF1-209ENST00000506630 KRTAP4-5Q9BYR2 181 aa9.09□□□□□ -0.95
TCOF1-209ENST00000506630 MED9Q9NWA0 146 aa9.09□□□□□ -0.95
TCOF1-209ENST00000506630 IL36BQ9NZH7 164 aa9.09□□□□□ -0.95
TCOF1-209ENST00000506630 MGST1P10620 155 aaKnown RBP9.08□□□□□ -0.96
TCOF1-209ENST00000506630 TAGLN2P37802 199 aaKnown RBP9.08□□□□□ -0.96
TCOF1-209ENST00000506630 SMCPP49901 116 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-209ENST00000506630 RPL19P84098 196 aaKnown RBP9.08□□□□□ -0.96
TCOF1-209ENST00000506630 SOHLH1Q5JUK2 328 aa9.08□□□□□ -0.96
TCOF1-209ENST00000506630 CFAP126Q5VTH2 177 aa9.08□□□□□ -0.96
TCOF1-209ENST00000506630 IGHV3-73A0A0B4J1V6 119 aa9.07□□□□□ -0.96
TCOF1-209ENST00000506630 RAB19A4D1S5 217 aa9.07□□□□□ -0.96
TCOF1-209ENST00000506630 RS1O15537 224 aa9.07□□□□□ -0.96
TCOF1-209ENST00000506630 ARMS2P0C7Q2 107 aa9.07□□□□□ -0.96
TCOF1-209ENST00000506630 GYPEP15421 78 aa9.07□□□□□ -0.96
TCOF1-209ENST00000506630 GNG4P50150 75 aa9.07□□□□□ -0.96
TCOF1-209ENST00000506630 ESRGQ1W209 222 aa9.07□□□□□ -0.96
TCOF1-209ENST00000506630 DNLZQ5SXM8 178 aa9.07□□□□□ -0.96
TCOF1-209ENST00000506630 SYT8Q8NBV8 401 aa9.07□□□□□ -0.96
TCOF1-209ENST00000506630 ZNRF2Q8NHG8 242 aa9.07□□□□□ -0.96
TCOF1-209ENST00000506630 PTH2Q96A98 100 aa9.07□□□□□ -0.96
TCOF1-209ENST00000506630 PHLDA3Q9Y5J5 127 aa9.07□□□□□ -0.96
TCOF1-209ENST00000506630 GATA1P15976 413 aaPredicted RBP9.06□□□□□ -0.96
TCOF1-209ENST00000506630 SRIP30626 198 aa9.06□□□□□ -0.96
TCOF1-209ENST00000506630 MRPL23Q16540 153 aaKnown RBP9.06□□□□□ -0.96
TCOF1-209ENST00000506630 ZNF575Q86XF7 245 aa9.06□□□□□ -0.96
TCOF1-209ENST00000506630 DNAH11Q96DT5 4516 aa9.06□□□□□ -0.96
TCOF1-209ENST00000506630 PKHD1P08F94 4074 aa9.06□□□□□ -0.96
TCOF1-209ENST00000506630 LOC100131303A0A0U1RQF7 123 aa9.05□□□□□ -0.96
TCOF1-209ENST00000506630 A8MWV9 139 aa9.05□□□□□ -0.96
TCOF1-209ENST00000506630 K7EQD1 137 aa9.05□□□□□ -0.96
TCOF1-209ENST00000506630 CIDEAO60543 219 aa9.05□□□□□ -0.96
TCOF1-209ENST00000506630 IGLV2-8P01709 118 aa9.05□□□□□ -0.96
TCOF1-209ENST00000506630 MRPS16Q9Y3D3 137 aaKnown RBP9.05□□□□□ -0.96
TCOF1-209ENST00000506630 RBFOX3A6NFN3 312 aa9.04□□□□□ -0.96
TCOF1-209ENST00000506630 M0R381 172 aa9.04□□□□□ -0.96
TCOF1-209ENST00000506630 RHOHQ15669 191 aa9.04□□□□□ -0.96
TCOF1-209ENST00000506630 TOR2AQ5JU69 321 aa9.04□□□□□ -0.96
TCOF1-209ENST00000506630 PIK3CD-AS1Q5SR53 167 aa9.04□□□□□ -0.96
TCOF1-209ENST00000506630 NEGR1Q7Z3B1 354 aa9.04□□□□□ -0.96
TCOF1-209ENST00000506630 ZFP82Q8N141 532 aa9.04□□□□□ -0.96
TCOF1-209ENST00000506630 LYPD6BQ8NI32 183 aa9.04□□□□□ -0.96
TCOF1-209ENST00000506630 DAZAP1Q96EP5 407 aaKnown RBP9.04□□□□□ -0.96
TCOF1-209ENST00000506630 SMIM12Q96EX1 92 aa9.04□□□□□ -0.96
TCOF1-209ENST00000506630 UPK3BQ9BT76 320 aa9.04□□□□□ -0.96
TCOF1-209ENST00000506630 PARLQ9H300 379 aa9.04□□□□□ -0.96
TCOF1-209ENST00000506630 JPT2Q9H910 190 aa9.04□□□□□ -0.96
TCOF1-209ENST00000506630 TRBV20OR9-2A0A075B6H5 130 aa9.03□□□□□ -0.96
TCOF1-209ENST00000506630 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
TCOF1-209ENST00000506630 CXCL1P09341 107 aa9.03□□□□□ -0.96
TCOF1-209ENST00000506630 Q6ZR54 194 aa9.03□□□□□ -0.96
TCOF1-209ENST00000506630 SLC25A29Q8N8R3 303 aa9.03□□□□□ -0.96
TCOF1-209ENST00000506630 PRADC1Q9BSG0 188 aa9.03□□□□□ -0.96
TCOF1-209ENST00000506630 Q9H8V8 135 aa9.03□□□□□ -0.96
TCOF1-209ENST00000506630 SCRT2Q9NQ03 307 aa9.03□□□□□ -0.96
TCOF1-209ENST00000506630 TRBV6-4A0A1B0GX49 114 aa9.02□□□□□ -0.97
TCOF1-209ENST00000506630 CEBPGP53567 150 aa9.02□□□□□ -0.97
TCOF1-209ENST00000506630 FAM74A4Q5TZK3 123 aa9.02□□□□□ -0.97
TCOF1-209ENST00000506630 EIF5A2Q9GZV4 153 aaKnown RBP9.02□□□□□ -0.97
TCOF1-209ENST00000506630 C19orf71A6NCJ1 209 aa9.01□□□□□ -0.97
TCOF1-209ENST00000506630 TMEM250H0YL14 139 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms