RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 FAM3BP58499 235 aaPredicted RBP4.85□□□□□ -1.63
NR1I3-221ENST00000505944 RRN3P1Q2M238 152 aa4.85□□□□□ -1.63
NR1I3-221ENST00000505944 Q6AWC8 147 aa4.85□□□□□ -1.63
NR1I3-221ENST00000505944 SMIM7Q9BQ49 75 aa4.85□□□□□ -1.63
NR1I3-221ENST00000505944 NOP10Q9NPE3 64 aaKnown RBP4.85□□□□□ -1.63
NR1I3-221ENST00000505944 MRPL16Q9NX20 251 aaKnown RBP4.85□□□□□ -1.63
NR1I3-221ENST00000505944 APOBP04114 4563 aaKnown RBP4.84□□□□□ -1.63
NR1I3-221ENST00000505944 DEFB131BA0A096LNP1 70 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 TRAV21A0A0B4J279 112 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 IGKV3D-20A0A0C4DH25 116 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 TEX48A0A1B0GUV7 120 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 GAGE12BA1L429 117 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 H3BVH4 76 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 GAGE7O76087 117 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 IGHV3-53P01767 116 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 PFN1P07737 140 aaKnown RBP4.84□□□□□ -1.63
NR1I3-221ENST00000505944 SFTA3P0C7M3 94 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 GAGE12FP0CL80 117 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 GAGE12GP0CL81 117 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 GAGE12IP0CL82 117 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 DEFB130BP0DP73 79 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 DEFB130AP0DP74 79 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 TAS2R60P59551 318 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 RNF212Q495C1 297 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 SAPCD1Q5SSQ6 148 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 FAM162BQ5T6X4 162 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 C1orf134Q5TEV5 83 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 FAM222AQ5U5X8 452 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 Q6ZTI0 123 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 Q8N1X5 172 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 MAPKAPK5-AS1Q8N8E1 139 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 OCC1Q8TAD7 63 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 RNASE8Q8TDE3 154 aaKnown RBP4.84□□□□□ -1.63
NR1I3-221ENST00000505944 TCEAL7Q9BRU2 100 aa4.84□□□□□ -1.63
NR1I3-221ENST00000505944 RNASE7Q9H1E1 156 aaKnown RBP4.84□□□□□ -1.63
NR1I3-221ENST00000505944 TRGV1A0A0A0MS02 117 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 IGHV3-16A0A0C4DH30 117 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 ZNF727A8MUV8 499 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 C16orf90A8MZG2 172 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 B4DEV8 164 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 KRBOX1C9JBD0 128 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 TMEM250H0YL14 139 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 PEA15Q15121 130 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 ADIRFQ15847 76 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 FAM159AQ6UWV7 190 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 Q6ZR54 194 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 Q6ZTC4 211 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 UBE2DNLQ8IWF7 75 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 SLC7A5P1Q8MH63 180 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 EIF4E3Q8N5X7 224 aaKnown RBP4.83□□□□□ -1.64
NR1I3-221ENST00000505944 C11orf72Q8NBR9 251 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 MLST8Q9BVC4 326 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 TPPP3Q9BW30 176 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 ZFP30Q9Y2G7 519 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 HERC1Q15751 4861 aa4.83□□□□□ -1.64
NR1I3-221ENST00000505944 TRBV6-1A0A0K0K1D8 114 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 TMEM189A5PLL7 270 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 C9JCJ5 164 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 ADCYAP1P18509 176 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 TAGLN2P37802 199 aaKnown RBP4.82□□□□□ -1.64
NR1I3-221ENST00000505944 TCL1AP56279 114 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 C12orf74Q32Q52 190 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 ZNF575Q86XF7 245 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 TMEM256Q8N2U0 113 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 OR2D3Q8NGH3 330 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 TMEM263Q8WUH6 116 aaKnown RBP4.82□□□□□ -1.64
NR1I3-221ENST00000505944 C16orf74Q96GX8 76 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 TXNDC17Q9BRA2 123 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 PYGO2Q9BRQ0 406 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 KRTAP4-5Q9BYR2 181 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 JPT2Q9H910 190 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 SDF2L1Q9HCN8 221 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 DKK2Q9UBU2 259 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 LENEPQ9Y5L5 61 aa4.82□□□□□ -1.64
NR1I3-221ENST00000505944 IGHV3-73A0A0B4J1V6 119 aa4.81□□□□□ -1.64
NR1I3-221ENST00000505944 TRBV7-9A0A0J9YWB2 115 aa4.81□□□□□ -1.64
NR1I3-221ENST00000505944 FABP5P3A8MUU1 101 aa4.81□□□□□ -1.64
NR1I3-221ENST00000505944 SNURFLB1AK76 121 aa4.81□□□□□ -1.64
NR1I3-221ENST00000505944 S100A9P06702 114 aaKnown RBP4.81□□□□□ -1.64
NR1I3-221ENST00000505944 RNASE3P12724 160 aaKnown RBP4.81□□□□□ -1.64
NR1I3-221ENST00000505944 ASIPP42127 132 aa4.81□□□□□ -1.64
NR1I3-221ENST00000505944 DAD1P61803 113 aa4.81□□□□□ -1.64
NR1I3-221ENST00000505944 RPL23P62829 140 aaKnown RBP4.81□□□□□ -1.64
NR1I3-221ENST00000505944 ZNF415Q09FC8 603 aa4.81□□□□□ -1.64
NR1I3-221ENST00000505944 LINC01551Q86U37 167 aa4.81□□□□□ -1.64
NR1I3-221ENST00000505944 NUDT10Q8NFP7 164 aa4.81□□□□□ -1.64
NR1I3-221ENST00000505944 NUDT11Q96G61 164 aa4.81□□□□□ -1.64
NR1I3-221ENST00000505944 NEU1Q99519 415 aa4.81□□□□□ -1.64
NR1I3-221ENST00000505944 C20orf144Q9BQM9 153 aa4.81□□□□□ -1.64
NR1I3-221ENST00000505944 TRGV11A0A075B6L2 103 aa4.8□□□□□ -1.64
NR1I3-221ENST00000505944 LINC00862A6NCI5 91 aa4.8□□□□□ -1.64
NR1I3-221ENST00000505944 C19orf71A6NCJ1 209 aa4.8□□□□□ -1.64
NR1I3-221ENST00000505944 SMIM9A6NGZ8 99 aa4.8□□□□□ -1.64
NR1I3-221ENST00000505944 FBLL1A6NHQ2 334 aaKnown RBP4.8□□□□□ -1.64
NR1I3-221ENST00000505944 M0R2N4 97 aa4.8□□□□□ -1.64
NR1I3-221ENST00000505944 M0R381 172 aa4.8□□□□□ -1.64
NR1I3-221ENST00000505944 P01737 135 aa4.8□□□□□ -1.64
NR1I3-221ENST00000505944 ARMS2P0C7Q2 107 aa4.8□□□□□ -1.64
NR1I3-221ENST00000505944 SPART-AS1P0CW21 52 aa4.8□□□□□ -1.64
NR1I3-221ENST00000505944 S100A4P26447 101 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms