RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 Q6ZTI0 123 aa5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 SYT8Q8NBV8 401 aa5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 MUC7Q8TAX7 377 aa5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 RPP21Q9H633 154 aaKnown RBP5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 PHLDA3Q9Y5J5 127 aa5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 DEFB131BA0A096LNP1 70 aa5.85□□□□□ -1.47
LIMCH1-206ENST00000505705 TRAV10A0A0B4J240 114 aa5.85□□□□□ -1.47
LIMCH1-206ENST00000505705 TMEM218A2RU14 115 aa5.85□□□□□ -1.47
LIMCH1-206ENST00000505705 F5H768 121 aa5.85□□□□□ -1.47
LIMCH1-206ENST00000505705 ATP5G1P05496 136 aa5.85□□□□□ -1.47
LIMCH1-206ENST00000505705 GZMBP10144 247 aa5.85□□□□□ -1.47
LIMCH1-206ENST00000505705 RNASE3P12724 160 aaKnown RBP5.85□□□□□ -1.47
LIMCH1-206ENST00000505705 LGALS9BQ3B8N2 356 aa5.85□□□□□ -1.47
LIMCH1-206ENST00000505705 ZNF876PQ49A33 203 aa5.85□□□□□ -1.47
LIMCH1-206ENST00000505705 SPANXN1Q5VSR9 72 aa5.85□□□□□ -1.47
LIMCH1-206ENST00000505705 PHLDA1Q8WV24 401 aaPredicted RBP5.85□□□□□ -1.47
LIMCH1-206ENST00000505705 IL36BQ9NZH7 164 aa5.85□□□□□ -1.47
LIMCH1-206ENST00000505705 MUC21A0A0G2JKD1 596 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 MUC21A0A140T8X8 626 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 A8MWL6 223 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 M0R381 172 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 IGHV3-53P01767 116 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 CXCL1P09341 107 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 DNLZQ5SXM8 178 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 FAM231DQ6ZW35 169 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 FER1L6-AS1Q8NA97 138 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 OR4C5Q8NGB2 326 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 OR10G8Q8NGN5 311 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 RASL10AQ92737 203 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 ISOC2Q96AB3 205 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 SFRP2Q96HF1 295 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 C9orf85Q96MD7 179 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 OSTCQ9NRP0 149 aa5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 KLK5Q9Y337 293 aaPredicted RBP5.84□□□□□ -1.47
LIMCH1-206ENST00000505705 NBEAL2Q6ZNJ1 2754 aa5.83□□□□□ -1.48
LIMCH1-206ENST00000505705 TRGV4A0A0C4DH28 118 aa5.83□□□□□ -1.48
LIMCH1-206ENST00000505705 A0A1W2PPQ1 181 aa5.83□□□□□ -1.48
LIMCH1-206ENST00000505705 NUPR2A6NF83 97 aa5.83□□□□□ -1.48
LIMCH1-206ENST00000505705 IGLL5B9A064 214 aa5.83□□□□□ -1.48
LIMCH1-206ENST00000505705 C3orf84H3BNL1 204 aa5.83□□□□□ -1.48
LIMCH1-206ENST00000505705 MED14OSP0DP75 135 aa5.83□□□□□ -1.48
LIMCH1-206ENST00000505705 PNRC1Q12796 327 aaPredicted RBP5.83□□□□□ -1.48
LIMCH1-206ENST00000505705 CEMP1Q6PRD7 247 aaPredicted RBP5.83□□□□□ -1.48
LIMCH1-206ENST00000505705 ZFP82Q8N141 532 aa5.83□□□□□ -1.48
LIMCH1-206ENST00000505705 BORCS7Q96B45 105 aa5.83□□□□□ -1.48
LIMCH1-206ENST00000505705 IGHV3-73A0A0B4J1V6 119 aa5.82□□□□□ -1.48
LIMCH1-206ENST00000505705 TRAV4A0A0B4J268 109 aa5.82□□□□□ -1.48
LIMCH1-206ENST00000505705 F2Z2F3 143 aa5.82□□□□□ -1.48
LIMCH1-206ENST00000505705 PPP1R2P9O14990 202 aa5.82□□□□□ -1.48
LIMCH1-206ENST00000505705 SMIM17P0DL12 118 aa5.82□□□□□ -1.48
LIMCH1-206ENST00000505705 NDUFA5Q16718 116 aa5.82□□□□□ -1.48
LIMCH1-206ENST00000505705 LYZL1Q6UWQ5 148 aa5.82□□□□□ -1.48
LIMCH1-206ENST00000505705 LINC00612Q8N6U2 182 aa5.82□□□□□ -1.48
LIMCH1-206ENST00000505705 SEC11CQ9BY50 192 aa5.82□□□□□ -1.48
LIMCH1-206ENST00000505705 A8MWV9 139 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 SNAI2O43623 268 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 MT-ND4LP03901 98 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 OR5AL1P0C617 328 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 ADCYAP1P18509 176 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 CACNG7P62955 275 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 TWIST1Q15672 202 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 CT83Q5H943 113 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 FAM74A4Q5TZK3 123 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 ZNF575Q86XF7 245 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 OR10AG1Q8NH19 301 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 TSKUQ8WUA8 353 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 PTH2Q96A98 100 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 ANAPC16Q96DE5 110 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 ZNF479Q96JC4 524 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 PGLYRP4Q96LB8 373 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 NDUFAF3Q9BU61 184 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 SCRT2Q9NQ03 307 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 V9GYV3 84 aa5.81□□□□□ -1.48
LIMCH1-206ENST00000505705 A0A087WWL8 130 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 A0A0J9YY99 117 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 RS1O15537 224 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 CIDEAO60543 219 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 IGLC6P0CF74 106 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 NTF3P20783 257 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 SLAQ13239 276 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 RNF212Q495C1 297 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 PIK3CD-AS1Q5SR53 167 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 CASC10Q5T4H9 136 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 CFAP126Q5VTH2 177 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 SMIM15Q7Z3B0 74 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 SLC7A5P1Q8MH63 180 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 C18orf15Q96N68 181 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 SSBP4Q9BWG4 385 aaPredicted RBP5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 GFRA4Q9GZZ7 299 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 JPT2Q9H910 190 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 NAT8BQ9UHF3 227 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 HHLA3Q9XRX5 114 aa5.8□□□□□ -1.48
LIMCH1-206ENST00000505705 IGHV4-4A0A075B6R2 117 aa5.79□□□□□ -1.48
LIMCH1-206ENST00000505705 TRAV26-1A0A087WT03 109 aa5.79□□□□□ -1.48
LIMCH1-206ENST00000505705 FAM231BA6NCW3 169 aa5.79□□□□□ -1.48
LIMCH1-206ENST00000505705 HIGD1CA8MV81 97 aa5.79□□□□□ -1.48
LIMCH1-206ENST00000505705 F5H697 171 aa5.79□□□□□ -1.48
LIMCH1-206ENST00000505705 PAX4O43316 350 aa5.79□□□□□ -1.48
LIMCH1-206ENST00000505705 NUDT3O95989 172 aa5.79□□□□□ -1.48
LIMCH1-206ENST00000505705 APOC3P02656 99 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms