RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 PQLC2Q6ZP29 291 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 C9orf47Q6ZRZ4 202 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 WFDC10BQ8IUB3 73 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 RASL10AQ92737 203 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 FAM167A-AS1Q96KT0 104 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 FAM19A4Q96LR4 140 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 SLC25A2Q9BXI2 301 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 MANBALQ9NQG1 85 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 GNG13Q9P2W3 67 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 PLA2G2DQ9UNK4 145 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 RBFOX3A6NFN3 312 aa6.65□□□□□ -1.34
NEDD9-210ENST00000505589 H3BQ15 152 aa6.65□□□□□ -1.34
NEDD9-210ENST00000505589 SLC17A3O00476 420 aa6.65□□□□□ -1.34
NEDD9-210ENST00000505589 OR7C2O60412 319 aa6.65□□□□□ -1.34
NEDD9-210ENST00000505589 SNRPCP09234 159 aaKnown RBP6.65□□□□□ -1.34
NEDD9-210ENST00000505589 GCHFRP30047 84 aa6.65□□□□□ -1.34
NEDD9-210ENST00000505589 UBE2L3P68036 154 aaKnown RBP6.65□□□□□ -1.34
NEDD9-210ENST00000505589 LINC01556Q5JQF7 62 aa6.65□□□□□ -1.34
NEDD9-210ENST00000505589 ZNF506Q5JVG8 444 aa6.65□□□□□ -1.34
NEDD9-210ENST00000505589 EIF5A2Q9GZV4 153 aaKnown RBP6.65□□□□□ -1.34
NEDD9-210ENST00000505589 AGPAT4-IT1Q9H0P7 198 aa6.65□□□□□ -1.34
NEDD9-210ENST00000505589 SMDT1Q9H4I9 107 aa6.65□□□□□ -1.34
NEDD9-210ENST00000505589 TMEM167BQ9NRX6 74 aa6.65□□□□□ -1.34
NEDD9-210ENST00000505589 TMEM14CQ9P0S9 112 aa6.65□□□□□ -1.34
NEDD9-210ENST00000505589 COX11Q9Y6N1 276 aa6.65□□□□□ -1.34
NEDD9-210ENST00000505589 TRBV19A0A075B6N1 114 aa6.64□□□□□ -1.35
NEDD9-210ENST00000505589 H3BTX0 84 aa6.64□□□□□ -1.35
NEDD9-210ENST00000505589 SRSF3P84103 164 aaKnown RBP6.64□□□□□ -1.35
NEDD9-210ENST00000505589 BTN1A1Q13410 526 aa6.64□□□□□ -1.35
NEDD9-210ENST00000505589 LAGE3Q14657 143 aa6.64□□□□□ -1.35
NEDD9-210ENST00000505589 PEA15Q15121 130 aa6.64□□□□□ -1.35
NEDD9-210ENST00000505589 FAM159AQ6UWV7 190 aa6.64□□□□□ -1.35
NEDD9-210ENST00000505589 LINC00528Q8N1L1 170 aa6.64□□□□□ -1.35
NEDD9-210ENST00000505589 SUN5Q8TC36 379 aa6.64□□□□□ -1.35
NEDD9-210ENST00000505589 PAXXQ9BUH6 204 aa6.64□□□□□ -1.35
NEDD9-210ENST00000505589 TREM1Q9NP99 234 aa6.64□□□□□ -1.35
NEDD9-210ENST00000505589 MRPL16Q9NX20 251 aaKnown RBP6.64□□□□□ -1.35
NEDD9-210ENST00000505589 VAX2Q9UIW0 290 aa6.64□□□□□ -1.35
NEDD9-210ENST00000505589 TP53TG3Q9ULZ0 132 aa6.64□□□□□ -1.35
NEDD9-210ENST00000505589 ARL2-SNX15V9GYD0 113 aa6.64□□□□□ -1.35
NEDD9-210ENST00000505589 TRGV11A0A075B6L2 103 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 TRAV8-3A0A0A6YYJ7 113 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 TRAV4A0A0B4J268 109 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 PYYP10082 97 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 PRB4P10163 310 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-210ENST00000505589 S100A1P23297 94 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 CSN1S1P47710 185 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 ZNF138P52744 262 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 MEF2BQ02080 365 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-210ENST00000505589 ERCC8Q13216 396 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 OR10J3Q5JRS4 329 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 NHLRC2Q8NBF2 726 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 OR4C5Q8NGB2 326 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 BLNKQ8WV28 456 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 FXYD5Q96DB9 178 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 OR51M1Q9H341 326 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 ZNF492Q9P255 531 aa6.63□□□□□ -1.35
NEDD9-210ENST00000505589 TMEM218A2RU14 115 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 FAM74A7A6NL05 159 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 KRBOX1C9JBD0 128 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 C9JQL5 133 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 M0R3E3 92 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 PAGE4O60829 102 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 NDUFS6O75380 124 aaKnown RBP6.62□□□□□ -1.35
NEDD9-210ENST00000505589 OR10J4P0C629 311 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 SFTA3P0C7M3 94 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 UBE2G2P60604 165 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 HAMPP81172 84 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 ZNF479Q96JC4 524 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 PRADC1Q9BSG0 188 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 FAM30AQ9NZY2 134 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 LENEPQ9Y5L5 61 aa6.62□□□□□ -1.35
NEDD9-210ENST00000505589 A0A1W2PRE2 83 aa6.61□□□□□ -1.35
NEDD9-210ENST00000505589 SRP19P09132 144 aaKnown RBP6.61□□□□□ -1.35
NEDD9-210ENST00000505589 Q6ZSA8 131 aa6.61□□□□□ -1.35
NEDD9-210ENST00000505589 Q9HAA7 133 aa6.61□□□□□ -1.35
NEDD9-210ENST00000505589 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 RBAKDNA6NC62 111 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 GGTLC3B5MD39 225 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 F6UZH7 168 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 TMEM250H0YL14 139 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 M0R2P5 195 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 RS1O15537 224 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 PDE6DO43924 150 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 NBEAP1P0C6P0 100 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 ADCYAP1P18509 176 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 C10orf91Q5T1B1 145 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 LELP1Q5T871 98 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 CST9LP1Q5W188 147 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 ZFAND2AQ8N6M9 145 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 CYB561D1Q8N8Q1 229 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 Q8N976 141 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 RMI2Q96E14 147 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
NEDD9-210ENST00000505589 NKX6-2Q9C056 277 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-210ENST00000505589 F8W036 122 aa6.59□□□□□ -1.35
NEDD9-210ENST00000505589 C11orf52Q96A22 123 aa6.59□□□□□ -1.35
NEDD9-210ENST00000505589 KCNS1Q96KK3 526 aa6.59□□□□□ -1.35
NEDD9-210ENST00000505589 TCEAL7Q9BRU2 100 aa6.59□□□□□ -1.35
NEDD9-210ENST00000505589 SEC11CQ9BY50 192 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms