RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 POM121L12Q8N7R1 296 aa11.79□□□□□ -0.52
SYNE4-207ENST00000505054 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
SYNE4-207ENST00000505054 EIF5A2Q9GZV4 153 aaKnown RBP11.79□□□□□ -0.52
SYNE4-207ENST00000505054 PARLQ9H300 379 aa11.79□□□□□ -0.52
SYNE4-207ENST00000505054 A0A1B0GVY2 172 aa11.78□□□□□ -0.52
SYNE4-207ENST00000505054 RPL19P84098 196 aaKnown RBP11.78□□□□□ -0.52
SYNE4-207ENST00000505054 OR5I1Q13606 314 aa11.78□□□□□ -0.52
SYNE4-207ENST00000505054 DNLZQ5SXM8 178 aa11.78□□□□□ -0.52
SYNE4-207ENST00000505054 TRAV26-1A0A087WT03 109 aa11.77□□□□□ -0.53
SYNE4-207ENST00000505054 C9JCJ5 164 aa11.77□□□□□ -0.53
SYNE4-207ENST00000505054 H3BVH4 76 aa11.77□□□□□ -0.53
SYNE4-207ENST00000505054 NDUFS6O75380 124 aaKnown RBP11.77□□□□□ -0.53
SYNE4-207ENST00000505054 MGST1P10620 155 aaKnown RBP11.77□□□□□ -0.53
SYNE4-207ENST00000505054 S100A4P26447 101 aaKnown RBP11.77□□□□□ -0.53
SYNE4-207ENST00000505054 ZNF876PQ49A33 203 aa11.77□□□□□ -0.53
SYNE4-207ENST00000505054 PTH2Q96A98 100 aa11.77□□□□□ -0.53
SYNE4-207ENST00000505054 ZNF479Q96JC4 524 aa11.77□□□□□ -0.53
SYNE4-207ENST00000505054 IL36BQ9NZH7 164 aa11.77□□□□□ -0.53
SYNE4-207ENST00000505054 DNAH2Q9P225 4427 aa11.76□□□□□ -0.53
SYNE4-207ENST00000505054 SRP19P09132 144 aaKnown RBP11.76□□□□□ -0.53
SYNE4-207ENST00000505054 SFTA3P0C7M3 94 aa11.76□□□□□ -0.53
SYNE4-207ENST00000505054 ARMS2P0C7Q2 107 aa11.76□□□□□ -0.53
SYNE4-207ENST00000505054 MED14OSP0DP75 135 aa11.76□□□□□ -0.53
SYNE4-207ENST00000505054 MUC4Q99102 2169 aa11.75□□□□□ -0.53
SYNE4-207ENST00000505054 TRAV4A0A0B4J268 109 aa11.75□□□□□ -0.53
SYNE4-207ENST00000505054 A0A0J9YY99 117 aa11.75□□□□□ -0.53
SYNE4-207ENST00000505054 C19orf71A6NCJ1 209 aa11.75□□□□□ -0.53
SYNE4-207ENST00000505054 CEBPGP53567 150 aa11.75□□□□□ -0.53
SYNE4-207ENST00000505054 FHL2Q14192 279 aa11.75□□□□□ -0.53
SYNE4-207ENST00000505054 C15orf53Q8NAA6 179 aa11.75□□□□□ -0.53
SYNE4-207ENST00000505054 VSIG2Q96IQ7 327 aa11.75□□□□□ -0.53
SYNE4-207ENST00000505054 SCRT2Q9NQ03 307 aa11.75□□□□□ -0.53
SYNE4-207ENST00000505054 K7EN84 100 aa11.74□□□□□ -0.53
SYNE4-207ENST00000505054 CXCL1P09341 107 aa11.74□□□□□ -0.53
SYNE4-207ENST00000505054 SRSF3P84103 164 aaKnown RBP11.74□□□□□ -0.53
SYNE4-207ENST00000505054 OCC1Q8TAD7 63 aa11.74□□□□□ -0.53
SYNE4-207ENST00000505054 C9JQL5 133 aa11.73□□□□□ -0.53
SYNE4-207ENST00000505054 RS1O15537 224 aa11.73□□□□□ -0.53
SYNE4-207ENST00000505054 IFITM2Q01629 132 aa11.73□□□□□ -0.53
SYNE4-207ENST00000505054 CFAP126Q5VTH2 177 aa11.73□□□□□ -0.53
SYNE4-207ENST00000505054 OR4C5Q8NGB2 326 aa11.73□□□□□ -0.53
SYNE4-207ENST00000505054 DNAH17Q9UFH2 4485 aa11.72□□□□□ -0.53
SYNE4-207ENST00000505054 H3BNG1 76 aa11.72□□□□□ -0.53
SYNE4-207ENST00000505054 NUDT3O95989 172 aa11.72□□□□□ -0.53
SYNE4-207ENST00000505054 P0DMU3 169 aa11.72□□□□□ -0.53
SYNE4-207ENST00000505054 FAM231AP0DMU4 169 aa11.72□□□□□ -0.53
SYNE4-207ENST00000505054 FAM231CP0DMU5 169 aa11.72□□□□□ -0.53
SYNE4-207ENST00000505054 BIN3Q9NQY0 253 aa11.72□□□□□ -0.53
SYNE4-207ENST00000505054 PRO0255Q9UI72 69 aa11.72□□□□□ -0.53
SYNE4-207ENST00000505054 TRGV4A0A0C4DH28 118 aa11.71□□□□□ -0.53
SYNE4-207ENST00000505054 PRSS29PA6NIE9 313 aa11.71□□□□□ -0.53
SYNE4-207ENST00000505054 CRYBA4P53673 196 aa11.71□□□□□ -0.53
SYNE4-207ENST00000505054 PIK3CD-AS1Q5SR53 167 aa11.71□□□□□ -0.53
SYNE4-207ENST00000505054 DMRTA1Q5VZB9 504 aa11.71□□□□□ -0.53
SYNE4-207ENST00000505054 OR2D3Q8NGH3 330 aa11.71□□□□□ -0.53
SYNE4-207ENST00000505054 DAZAP1Q96EP5 407 aaKnown RBP11.71□□□□□ -0.53
SYNE4-207ENST00000505054 SMIM7Q9BQ49 75 aa11.71□□□□□ -0.53
SYNE4-207ENST00000505054 HHLA3Q9XRX5 114 aa11.71□□□□□ -0.53
SYNE4-207ENST00000505054 RTL8CO15255 209 aa11.7□□□□□ -0.54
SYNE4-207ENST00000505054 PAX4O43316 350 aa11.7□□□□□ -0.54
SYNE4-207ENST00000505054 SNAI2O43623 268 aa11.7□□□□□ -0.54
SYNE4-207ENST00000505054 P01737 135 aa11.7□□□□□ -0.54
SYNE4-207ENST00000505054 GZMBP10144 247 aa11.7□□□□□ -0.54
SYNE4-207ENST00000505054 SSBP4Q9BWG4 385 aaPredicted RBP11.7□□□□□ -0.54
SYNE4-207ENST00000505054 JPT2Q9H910 190 aa11.7□□□□□ -0.54
SYNE4-207ENST00000505054 PHLDA3Q9Y5J5 127 aa11.7□□□□□ -0.54
SYNE4-207ENST00000505054 DYNC1H1Q14204 4646 aaKnown RBP11.69□□□□□ -0.54
SYNE4-207ENST00000505054 ZNF727A8MUV8 499 aa11.69□□□□□ -0.54
SYNE4-207ENST00000505054 M0R381 172 aa11.69□□□□□ -0.54
SYNE4-207ENST00000505054 NXPH4O95158 308 aa11.69□□□□□ -0.54
SYNE4-207ENST00000505054 GATA1P15976 413 aaPredicted RBP11.69□□□□□ -0.54
SYNE4-207ENST00000505054 RAB14P61106 215 aa11.69□□□□□ -0.54
SYNE4-207ENST00000505054 SLAQ13239 276 aa11.69□□□□□ -0.54
SYNE4-207ENST00000505054 PEA15Q15121 130 aa11.69□□□□□ -0.54
SYNE4-207ENST00000505054 SYT8Q8NBV8 401 aa11.69□□□□□ -0.54
SYNE4-207ENST00000505054 NUDT10Q8NFP7 164 aa11.69□□□□□ -0.54
SYNE4-207ENST00000505054 OR10AG1Q8NH19 301 aa11.69□□□□□ -0.54
SYNE4-207ENST00000505054 NUDT11Q96G61 164 aa11.69□□□□□ -0.54
SYNE4-207ENST00000505054 RNASE7Q9H1E1 156 aaKnown RBP11.69□□□□□ -0.54
SYNE4-207ENST00000505054 LY96Q9Y6Y9 160 aa11.69□□□□□ -0.54
SYNE4-207ENST00000505054 A0A096LPF7 62 aa11.68□□□□□ -0.54
SYNE4-207ENST00000505054 IGHV3-73A0A0B4J1V6 119 aa11.68□□□□□ -0.54
SYNE4-207ENST00000505054 A8MWV9 139 aa11.68□□□□□ -0.54
SYNE4-207ENST00000505054 OR5AL1P0C617 328 aa11.68□□□□□ -0.54
SYNE4-207ENST00000505054 IGLC6P0CF74 106 aa11.68□□□□□ -0.54
SYNE4-207ENST00000505054 RPS20P60866 119 aaKnown RBP11.68□□□□□ -0.54
SYNE4-207ENST00000505054 CLLU1Q5K131 121 aa11.68□□□□□ -0.54
SYNE4-207ENST00000505054 LINC01551Q86U37 167 aa11.68□□□□□ -0.54
SYNE4-207ENST00000505054 ZFP82Q8N141 532 aa11.68□□□□□ -0.54
SYNE4-207ENST00000505054 SAMD10Q9BYL1 202 aa11.68□□□□□ -0.54
SYNE4-207ENST00000505054 DNAH11Q96DT5 4516 aa11.68□□□□□ -0.54
SYNE4-207ENST00000505054 ABCA13Q86UQ4 5058 aa11.67□□□□□ -0.54
SYNE4-207ENST00000505054 MUC21A0A0G2JKD1 596 aa11.67□□□□□ -0.54
SYNE4-207ENST00000505054 MUC21A0A140T8X8 626 aa11.67□□□□□ -0.54
SYNE4-207ENST00000505054 UFSP1Q6NVU6 142 aa11.67□□□□□ -0.54
SYNE4-207ENST00000505054 SMDT1Q9H4I9 107 aa11.67□□□□□ -0.54
SYNE4-207ENST00000505054 NACAE9PAV3 2078 aa11.67□□□□□ -0.54
SYNE4-207ENST00000505054 CIDEAO60543 219 aa11.66□□□□□ -0.54
SYNE4-207ENST00000505054 RNF212Q495C1 297 aa11.66□□□□□ -0.54
SYNE4-207ENST00000505054 ZFP2Q6ZN57 461 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms