RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 PPP1R27Q86WC6 154 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 FAM216BQ8N7L0 139 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 ZNF502Q8TBZ5 544 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 RAB37Q96AX2 223 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 CCL13Q99616 98 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 NXT2Q9NPJ8 142 aaKnown RBP3.12□□□□□ -1.91
RFC1-208ENST00000504849 HILPDAQ9Y5L2 63 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 SLC25A15Q9Y619 301 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 NF1P21359 2839 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 CELSR3Q9NYQ7 3312 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 RP1P56715 2156 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 EML6Q6ZMW3 1958 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 SPAG17Q6Q759 2223 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 TRBV19A0A075B6N1 114 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 IGHV3-16A0A0C4DH30 117 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 LOC389332A0A1B0GUA5 103 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 H3BRN7 92 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 K7EM74 188 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 SNAI2O43623 268 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 ENSAO43768 121 aaKnown RBP3.11□□□□□ -1.91
RFC1-208ENST00000504849 DPM2O94777 84 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 NCR2O95944 276 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 IGHV1-46P01743 117 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 IGKCP01834 107 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 RBP4P02753 201 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 IFI27P40305 119 aaPredicted RBP3.11□□□□□ -1.91
RFC1-208ENST00000504849 ZNF876PQ49A33 203 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 TCTEX1D4Q5JR98 221 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 C9orf66Q5T8R8 295 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 LINC00322Q6ZN03 302 aaPredicted RBP3.11□□□□□ -1.91
RFC1-208ENST00000504849 TTC9CQ8N5M4 171 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 DEFB108BQ8NET1 73 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 BAALCQ8WXS3 180 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 ARPC1AQ92747 370 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 RPEQ96AT9 228 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 ZC2HC1AQ96GY0 325 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 HIST1H4GQ99525 98 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 RNF5Q99942 180 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 SHANK2-AS3Q9BTD1 123 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 CHAC1Q9BUX1 264 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 DPM3Q9P2X0 92 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 TP73-AS1Q9UF72 201 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 F11RQ9Y624 299 aaKnown RBP3.11□□□□□ -1.91
RFC1-208ENST00000504849 V9GYY9 64 aa3.11□□□□□ -1.91
RFC1-208ENST00000504849 SPG11Q96JI7 2443 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 TMEM213A2RRL7 107 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 NCBP2LA6PVI3 153 aaKnown RBP3.1□□□□□ -1.91
RFC1-208ENST00000504849 LINC01619G3V211 115 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 GNG7O60262 68 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 SH2D1AO60880 128 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 IGLV2-23P01705 113 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 IGLV2-11P01706 119 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 RBMY1CP0DJD4 496 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 RPL7P18124 248 aaKnown RBP3.1□□□□□ -1.91
RFC1-208ENST00000504849 AZU1P20160 251 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 EVI2AP22794 236 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 CD24P25063 80 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 PLNP26678 52 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 FCER1GP30273 86 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 TCTAP57738 103 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 SRSF6Q13247 344 aaKnown RBP3.1□□□□□ -1.91
RFC1-208ENST00000504849 MRPL51Q4U2R6 128 aaKnown RBP3.1□□□□□ -1.91
RFC1-208ENST00000504849 C10orf55Q5SWW7 151 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 HCP5Q6MZN7 132 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 LYZL1Q6UWQ5 148 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 FOXI2Q6ZQN5 318 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 Q6ZS92 163 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 CEND1Q8N111 149 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 EXOC3-AS1Q8N2X6 119 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 ATP6V0E2Q8NHE4 81 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 VGLL1Q99990 258 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 JPT2Q9H910 190 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 DOPEY2Q9Y3R5 2298 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 PCDH15Q96QU1 1955 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 PTPRQQ9UMZ3 2332 aa3.1□□□□□ -1.91
RFC1-208ENST00000504849 TRAV8-1A0A0A6YYK1 113 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 LINC01546A6NGU7 62 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 CNIH1O95406 144 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 IGHV3-48P01763 117 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 CCL3L1P16619 93 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 LY6DQ14210 128 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 C5orf47Q569G3 176 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 FAM201AQ5SY85 155 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 MYO7BQ6PIF6 2116 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 DUX4L9Q6RFH8 374 aaPredicted RBP3.09□□□□□ -1.91
RFC1-208ENST00000504849 AMN1Q8IY45 258 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 Q8N8P6 123 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 MYOZ3Q8TDC0 251 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 MRAP2Q96G30 205 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 CHCHD5Q9BSY4 110 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 TMEM133Q9H2Q1 129 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 NHP2Q9NX24 153 aaKnown RBP3.09□□□□□ -1.91
RFC1-208ENST00000504849 MRPL36Q9P0J6 103 aaKnown RBP3.09□□□□□ -1.91
RFC1-208ENST00000504849 SIGLEC9Q9Y336 463 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 TSSC4Q9Y5U2 329 aaPredicted RBP3.09□□□□□ -1.91
RFC1-208ENST00000504849 INSIG2Q9Y5U4 225 aa3.09□□□□□ -1.91
RFC1-208ENST00000504849 ITPR2Q14571 2701 aa3.09□□□□□ -1.92
RFC1-208ENST00000504849 LRRK2Q5S007 2527 aa3.09□□□□□ -1.92
RFC1-208ENST00000504849 KIAA2026Q5HYC2 2103 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 SEC16AO15027 2179 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms