RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 RPS10P5Q9NQ39 176 aa9.63□□□□□ -0.87
PDLIM7-211ENST00000504318 MRPL16Q9NX20 251 aaKnown RBP9.63□□□□□ -0.87
PDLIM7-211ENST00000504318 SCO2A0A1W2PP80 73 aa9.62□□□□□ -0.87
PDLIM7-211ENST00000504318 PGPA6NDG6 321 aa9.62□□□□□ -0.87
PDLIM7-211ENST00000504318 GGTLC3B5MD39 225 aa9.62□□□□□ -0.87
PDLIM7-211ENST00000504318 MED14OSP0DP75 135 aa9.62□□□□□ -0.87
PDLIM7-211ENST00000504318 CSN1S1P47710 185 aa9.62□□□□□ -0.87
PDLIM7-211ENST00000504318 FHL2Q14192 279 aa9.62□□□□□ -0.87
PDLIM7-211ENST00000504318 HIST1H2BAQ96A08 127 aa9.62□□□□□ -0.87
PDLIM7-211ENST00000504318 LY96Q9Y6Y9 160 aa9.62□□□□□ -0.87
PDLIM7-211ENST00000504318 DNAH5Q8TE73 4624 aa9.61□□□□□ -0.87
PDLIM7-211ENST00000504318 TRGV2A0A075B6R0 118 aa9.61□□□□□ -0.87
PDLIM7-211ENST00000504318 TRAV8-1A0A0A6YYK1 113 aa9.61□□□□□ -0.87
PDLIM7-211ENST00000504318 C9JCJ5 164 aa9.61□□□□□ -0.87
PDLIM7-211ENST00000504318 S100A9P06702 114 aaKnown RBP9.61□□□□□ -0.87
PDLIM7-211ENST00000504318 GNG5P63218 68 aa9.61□□□□□ -0.87
PDLIM7-211ENST00000504318 MUC21Q5SSG8 566 aa9.61□□□□□ -0.87
PDLIM7-211ENST00000504318 RASL10AQ92737 203 aa9.61□□□□□ -0.87
PDLIM7-211ENST00000504318 CTDSP1Q9GZU7 261 aa9.61□□□□□ -0.87
PDLIM7-211ENST00000504318 IGLV2-11P01706 119 aa9.6□□□□□ -0.87
PDLIM7-211ENST00000504318 MT-ND4LP03901 98 aa9.6□□□□□ -0.87
PDLIM7-211ENST00000504318 AKR1C3P42330 323 aa9.6□□□□□ -0.87
PDLIM7-211ENST00000504318 CRYBA4P53673 196 aa9.6□□□□□ -0.87
PDLIM7-211ENST00000504318 SUMO1P63165 101 aaKnown RBP9.6□□□□□ -0.87
PDLIM7-211ENST00000504318 ADIRFQ15847 76 aa9.6□□□□□ -0.87
PDLIM7-211ENST00000504318 GOLT1AQ6ZVE7 132 aa9.6□□□□□ -0.87
PDLIM7-211ENST00000504318 C5orf17Q8NAS9 161 aa9.6□□□□□ -0.87
PDLIM7-211ENST00000504318 TMEM242Q9NWH2 141 aa9.6□□□□□ -0.87
PDLIM7-211ENST00000504318 PEX7O00628 323 aa9.59□□□□□ -0.87
PDLIM7-211ENST00000504318 IGHV3-53P01767 116 aa9.59□□□□□ -0.87
PDLIM7-211ENST00000504318 RPL35P42766 123 aaKnown RBP9.59□□□□□ -0.87
PDLIM7-211ENST00000504318 ZNF415Q09FC8 603 aa9.59□□□□□ -0.87
PDLIM7-211ENST00000504318 Q6ZRN7 208 aaPredicted RBP9.59□□□□□ -0.87
PDLIM7-211ENST00000504318 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.59□□□□□ -0.87
PDLIM7-211ENST00000504318 IGHV3-16A0A0C4DH30 117 aa9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 A0A1W2PPQ1 181 aa9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 PPP1R2P9O14990 202 aa9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 GNG4P50150 75 aa9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 ZNF80P51504 273 aaPredicted RBP9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 RPL23P62829 140 aaKnown RBP9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 TMEM183BQ1AE95 376 aa9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 LINC01551Q86U37 167 aa9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 CBLN2Q8IUK8 224 aa9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 TMEM183AQ8IXX5 376 aa9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 C15orf54Q8N8G6 183 aa9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 CMTM2Q8TAZ6 248 aa9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 ZNF479Q96JC4 524 aa9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 C11orf21Q9P2W6 132 aa9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 PRO0255Q9UI72 69 aa9.58□□□□□ -0.88
PDLIM7-211ENST00000504318 GNRH2O43555 120 aa9.57□□□□□ -0.88
PDLIM7-211ENST00000504318 TCRAP04437 139 aa9.57□□□□□ -0.88
PDLIM7-211ENST00000504318 TYMSP04818 313 aa9.57□□□□□ -0.88
PDLIM7-211ENST00000504318 ANAPC16Q96DE5 110 aa9.57□□□□□ -0.88
PDLIM7-211ENST00000504318 SMIM12Q96EX1 92 aa9.57□□□□□ -0.88
PDLIM7-211ENST00000504318 SPXQ9BT56 116 aa9.57□□□□□ -0.88
PDLIM7-211ENST00000504318 DERL1Q9BUN8 251 aa9.57□□□□□ -0.88
PDLIM7-211ENST00000504318 EPDR1Q9UM22 224 aa9.57□□□□□ -0.88
PDLIM7-211ENST00000504318 RPH3ALQ9UNE2 315 aa9.57□□□□□ -0.88
PDLIM7-211ENST00000504318 APOBP04114 4563 aaKnown RBP9.57□□□□□ -0.88
PDLIM7-211ENST00000504318 TRGV11A0A075B6L2 103 aa9.56□□□□□ -0.88
PDLIM7-211ENST00000504318 SERTM2A0A1B0GWG4 89 aa9.56□□□□□ -0.88
PDLIM7-211ENST00000504318 K7EQM0 130 aa9.56□□□□□ -0.88
PDLIM7-211ENST00000504318 PAX4O43316 350 aa9.56□□□□□ -0.88
PDLIM7-211ENST00000504318 CENPWQ5EE01 88 aa9.56□□□□□ -0.88
PDLIM7-211ENST00000504318 TTC32Q5I0X7 151 aa9.56□□□□□ -0.88
PDLIM7-211ENST00000504318 SGK494Q96LW2 274 aa9.56□□□□□ -0.88
PDLIM7-211ENST00000504318 C8orf49Q96NF6 230 aa9.56□□□□□ -0.88
PDLIM7-211ENST00000504318 HHLA3Q9XRX5 114 aa9.56□□□□□ -0.88
PDLIM7-211ENST00000504318 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
PDLIM7-211ENST00000504318 TRAV21A0A0B4J279 112 aa9.55□□□□□ -0.88
PDLIM7-211ENST00000504318 BTF3P20290 206 aaKnown RBP9.55□□□□□ -0.88
PDLIM7-211ENST00000504318 UBE2G1P62253 170 aa9.55□□□□□ -0.88
PDLIM7-211ENST00000504318 LYPD5Q6UWN5 251 aa9.55□□□□□ -0.88
PDLIM7-211ENST00000504318 FAM159AQ6UWV7 190 aa9.55□□□□□ -0.88
PDLIM7-211ENST00000504318 ISOC2Q96AB3 205 aa9.55□□□□□ -0.88
PDLIM7-211ENST00000504318 FMC1Q96HJ9 113 aa9.55□□□□□ -0.88
PDLIM7-211ENST00000504318 KRTAP4-5Q9BYR2 181 aa9.55□□□□□ -0.88
PDLIM7-211ENST00000504318 BIN3Q9NQY0 253 aa9.55□□□□□ -0.88
PDLIM7-211ENST00000504318 ABCA13Q86UQ4 5058 aa9.54□□□□□ -0.88
PDLIM7-211ENST00000504318 TRBV20OR9-2A0A075B6H5 130 aa9.54□□□□□ -0.88
PDLIM7-211ENST00000504318 TRAV4A0A0B4J268 109 aa9.54□□□□□ -0.88
PDLIM7-211ENST00000504318 FBLL1A6NHQ2 334 aaKnown RBP9.54□□□□□ -0.88
PDLIM7-211ENST00000504318 K7EQD1 137 aa9.54□□□□□ -0.88
PDLIM7-211ENST00000504318 S100PP25815 95 aa9.54□□□□□ -0.88
PDLIM7-211ENST00000504318 SLAQ13239 276 aa9.54□□□□□ -0.88
PDLIM7-211ENST00000504318 TRBV6-1A0A0K0K1D8 114 aa9.53□□□□□ -0.88
PDLIM7-211ENST00000504318 M0R2P5 195 aa9.53□□□□□ -0.88
PDLIM7-211ENST00000504318 NXPH4O95158 308 aa9.53□□□□□ -0.88
PDLIM7-211ENST00000504318 LINC00315P59091 139 aa9.53□□□□□ -0.88
PDLIM7-211ENST00000504318 KRTAP10-2P60368 255 aa9.53□□□□□ -0.88
PDLIM7-211ENST00000504318 TMEM75Q8N9X5 138 aa9.53□□□□□ -0.88
PDLIM7-211ENST00000504318 OCC1Q8TAD7 63 aa9.53□□□□□ -0.88
PDLIM7-211ENST00000504318 SFRP2Q96HF1 295 aa9.53□□□□□ -0.88
PDLIM7-211ENST00000504318 BTF3L4Q96K17 158 aa9.53□□□□□ -0.88
PDLIM7-211ENST00000504318 C9orf85Q96MD7 179 aa9.53□□□□□ -0.88
PDLIM7-211ENST00000504318 IMMP2LQ96T52 175 aa9.53□□□□□ -0.88
PDLIM7-211ENST00000504318 PSG8Q9UQ74 426 aa9.53□□□□□ -0.88
PDLIM7-211ENST00000504318 SIVA1O15304 175 aa9.52□□□□□ -0.89
PDLIM7-211ENST00000504318 MRPL23Q16540 153 aaKnown RBP9.52□□□□□ -0.89
PDLIM7-211ENST00000504318 KCNIP4Q6PIL6 250 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms