RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 BLCAPP62952 87 aa12.84□□□□□ -0.35
PCDHA1-203ENST00000504120 SUMO4Q6EEV6 95 aa12.84□□□□□ -0.35
PCDHA1-203ENST00000504120 C5orf56Q8N8D9 126 aa12.84□□□□□ -0.35
PCDHA1-203ENST00000504120 KIR2DL5BA0A0G2JN68 375 aa12.84□□□□□ -0.35
PCDHA1-203ENST00000504120 KIR2DL5BA0A0G2JPC4 375 aa12.84□□□□□ -0.35
PCDHA1-203ENST00000504120 KIR2DL5AQ8N109 375 aa12.84□□□□□ -0.35
PCDHA1-203ENST00000504120 CRYGCP07315 174 aa12.84□□□□□ -0.35
PCDHA1-203ENST00000504120 SLURP1P55000 103 aa12.84□□□□□ -0.35
PCDHA1-203ENST00000504120 PCNX1Q96RV3 2341 aa12.84□□□□□ -0.35
PCDHA1-203ENST00000504120 NOTCH3Q9UM47 2321 aa12.84□□□□□ -0.35
PCDHA1-203ENST00000504120 HAMPP81172 84 aa12.83□□□□□ -0.35
PCDHA1-203ENST00000504120 CLPSL2Q6UWE3 100 aa12.83□□□□□ -0.35
PCDHA1-203ENST00000504120 SEM1Q6ZVN7 128 aa12.83□□□□□ -0.35
PCDHA1-203ENST00000504120 PRO3102Q9H379 93 aa12.83□□□□□ -0.35
PCDHA1-203ENST00000504120 Q9H8V8 135 aa12.83□□□□□ -0.35
PCDHA1-203ENST00000504120 IGLV1-47P01700 117 aa12.83□□□□□ -0.36
PCDHA1-203ENST00000504120 XCL1P47992 114 aa12.83□□□□□ -0.36
PCDHA1-203ENST00000504120 ADORA2A-AS1P86434 159 aa12.83□□□□□ -0.36
PCDHA1-203ENST00000504120 TRAV25A0A0B4J276 109 aa12.83□□□□□ -0.36
PCDHA1-203ENST00000504120 PCP2Q8IVA1 136 aa12.83□□□□□ -0.36
PCDHA1-203ENST00000504120 PRSS47A8MTI9 375 aa12.83□□□□□ -0.36
PCDHA1-203ENST00000504120 TEX22C9J3V5 150 aa12.83□□□□□ -0.36
PCDHA1-203ENST00000504120 APRG1Q8IVJ8 170 aa12.83□□□□□ -0.36
PCDHA1-203ENST00000504120 C16orf74Q96GX8 76 aa12.83□□□□□ -0.36
PCDHA1-203ENST00000504120 RPL39LQ96EH5 51 aaKnown RBP12.82□□□□□ -0.36
PCDHA1-203ENST00000504120 DAZAP2Q15038 168 aaPredicted RBP12.82□□□□□ -0.36
PCDHA1-203ENST00000504120 LINC01545Q5VT33 79 aa12.82□□□□□ -0.36
PCDHA1-203ENST00000504120 A0A0J9YY99 117 aa12.82□□□□□ -0.36
PCDHA1-203ENST00000504120 C9orf66Q5T8R8 295 aa12.82□□□□□ -0.36
PCDHA1-203ENST00000504120 IGLV2-14P01704 120 aa12.81□□□□□ -0.36
PCDHA1-203ENST00000504120 K7EMT4 169 aa12.81□□□□□ -0.36
PCDHA1-203ENST00000504120 ODF3L1Q8IXM7 274 aa12.81□□□□□ -0.36
PCDHA1-203ENST00000504120 TTC28Q96AY4 2481 aa12.81□□□□□ -0.36
PCDHA1-203ENST00000504120 SPRY2O43597 315 aa12.81□□□□□ -0.36
PCDHA1-203ENST00000504120 AMTNQ6UX39 209 aa12.81□□□□□ -0.36
PCDHA1-203ENST00000504120 ZMAT4Q9H898 229 aa12.81□□□□□ -0.36
PCDHA1-203ENST00000504120 ZFP2Q6ZN57 461 aa12.8□□□□□ -0.36
PCDHA1-203ENST00000504120 MSRB1Q9NZV6 116 aa12.8□□□□□ -0.36
PCDHA1-203ENST00000504120 C9orf47Q6ZRZ4 202 aa12.8□□□□□ -0.36
PCDHA1-203ENST00000504120 IFITM1P13164 125 aa12.8□□□□□ -0.36
PCDHA1-203ENST00000504120 DEFB125Q8N687 156 aa12.8□□□□□ -0.36
PCDHA1-203ENST00000504120 GAGE12HA6NDE8 117 aa12.8□□□□□ -0.36
PCDHA1-203ENST00000504120 K7EQD1 137 aa12.8□□□□□ -0.36
PCDHA1-203ENST00000504120 A0A1W2PNU3 283 aaPredicted RBP12.79□□□□□ -0.36
PCDHA1-203ENST00000504120 COL4A3Q01955 1670 aa12.79□□□□□ -0.36
PCDHA1-203ENST00000504120 TEX48A0A1B0GUV7 120 aa12.79□□□□□ -0.36
PCDHA1-203ENST00000504120 IGHG4P01861 327 aa12.79□□□□□ -0.36
PCDHA1-203ENST00000504120 DAZ2Q13117 558 aaKnown RBP12.79□□□□□ -0.36
PCDHA1-203ENST00000504120 DAZ4Q86SG3 579 aaKnown RBP12.79□□□□□ -0.36
PCDHA1-203ENST00000504120 Q8N7P7 452 aa12.79□□□□□ -0.36
PCDHA1-203ENST00000504120 DAZ3Q9NR90 486 aaKnown RBP12.79□□□□□ -0.36
PCDHA1-203ENST00000504120 TECTAO75443 2155 aa12.78□□□□□ -0.36
PCDHA1-203ENST00000504120 IGKV2D-24A0A075B6R9 120 aa12.78□□□□□ -0.36
PCDHA1-203ENST00000504120 TMEM89A2RUT3 159 aa12.78□□□□□ -0.36
PCDHA1-203ENST00000504120 NTN5Q8WTR8 489 aaPredicted RBP12.78□□□□□ -0.36
PCDHA1-203ENST00000504120 GTSF1Q8WW33 167 aa12.78□□□□□ -0.36
PCDHA1-203ENST00000504120 CGB3P0DN86 165 aa12.78□□□□□ -0.36
PCDHA1-203ENST00000504120 NUPR1O60356 82 aa12.77□□□□□ -0.36
PCDHA1-203ENST00000504120 MED14OSP0DP75 135 aa12.77□□□□□ -0.36
PCDHA1-203ENST00000504120 Q6ZQT7 251 aa12.77□□□□□ -0.36
PCDHA1-203ENST00000504120 TRBV6-1A0A0K0K1D8 114 aa12.77□□□□□ -0.36
PCDHA1-203ENST00000504120 IGKV1OR2-108A0A075B7D4 117 aa12.77□□□□□ -0.37
PCDHA1-203ENST00000504120 ZFP36P26651 326 aaKnown RBP12.77□□□□□ -0.37
PCDHA1-203ENST00000504120 FBXL19-AS1Q494R0 122 aa12.77□□□□□ -0.37
PCDHA1-203ENST00000504120 CDPF1Q6NVV7 123 aa12.77□□□□□ -0.37
PCDHA1-203ENST00000504120 SH2D6Q7Z4S9 175 aa12.77□□□□□ -0.37
PCDHA1-203ENST00000504120 GPHB5Q86YW7 130 aa12.77□□□□□ -0.37
PCDHA1-203ENST00000504120 PRAC2D3DTV9 90 aa12.76□□□□□ -0.37
PCDHA1-203ENST00000504120 ATP6V0E2Q8NHE4 81 aa12.76□□□□□ -0.37
PCDHA1-203ENST00000504120 IGHV4OR15-8A0A075B7B6 117 aa12.76□□□□□ -0.37
PCDHA1-203ENST00000504120 A0A087WW49 117 aa12.76□□□□□ -0.37
PCDHA1-203ENST00000504120 ANKRD29Q8N6D5 301 aa12.76□□□□□ -0.37
PCDHA1-203ENST00000504120 EML6Q6ZMW3 1958 aa12.76□□□□□ -0.37
PCDHA1-203ENST00000504120 MRPL23Q16540 153 aaKnown RBP12.76□□□□□ -0.37
PCDHA1-203ENST00000504120 C5orf38Q86SI9 138 aa12.76□□□□□ -0.37
PCDHA1-203ENST00000504120 C2orf70A6NJV1 201 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 LINC00173Q6ZV60 143 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 ORMDL1Q9P0S3 153 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 GYPEP15421 78 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 Q6ZVH6 145 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 PIFOQ8TCI5 191 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 TRAV12-1A0A0B4J245 112 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 TINCRA0A1B0GVN0 87 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 ATP5G1P05496 136 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 C1orf43Q9BWL3 253 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 A0A0J9YXV3 536 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 IGHG2P01859 326 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 BAALC-AS2P0C853 105 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 SPART-AS1P0CW21 52 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 CTRLP40313 264 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 SHANK1Q9Y566 2161 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 CCL25O15444 150 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 ANKRD39Q53RE8 183 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 Q8N1Y9 231 aa12.75□□□□□ -0.37
PCDHA1-203ENST00000504120 MED13Q9UHV7 2174 aa12.74□□□□□ -0.37
PCDHA1-203ENST00000504120 SIRPDQ9H106 197 aa12.74□□□□□ -0.37
PCDHA1-203ENST00000504120 ICOSQ9Y6W8 199 aa12.74□□□□□ -0.37
PCDHA1-203ENST00000504120 E7EUB6 86 aa12.74□□□□□ -0.37
PCDHA1-203ENST00000504120 C11orf1Q9H5F2 150 aa12.74□□□□□ -0.37
PCDHA1-203ENST00000504120 TRAV4A0A0B4J268 109 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms