RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 BCAP31P51572 246 aa2.33□□□□□ -2.04
UBE3D-205ENST00000503942 USF2Q15853 346 aaPredicted RBP2.33□□□□□ -2.04
UBE3D-205ENST00000503942 DEFB114Q30KQ6 69 aa2.33□□□□□ -2.04
UBE3D-205ENST00000503942 DNLZQ5SXM8 178 aa2.33□□□□□ -2.04
UBE3D-205ENST00000503942 GPHB5Q86YW7 130 aa2.33□□□□□ -2.04
UBE3D-205ENST00000503942 OR4X1Q8NH49 305 aa2.33□□□□□ -2.04
UBE3D-205ENST00000503942 RNASEH2CQ8TDP1 164 aaKnown RBP2.33□□□□□ -2.04
UBE3D-205ENST00000503942 CIB3Q96Q77 187 aaPredicted RBP2.33□□□□□ -2.04
UBE3D-205ENST00000503942 NMES1Q9C002 83 aa2.33□□□□□ -2.04
UBE3D-205ENST00000503942 ZNF436Q9C0F3 470 aaPredicted RBP2.33□□□□□ -2.04
UBE3D-205ENST00000503942 WFDC10AQ9H1F0 79 aa2.33□□□□□ -2.04
UBE3D-205ENST00000503942 MED28Q9H204 178 aa2.33□□□□□ -2.04
UBE3D-205ENST00000503942 ZMAT5Q9UDW3 170 aaKnown RBP2.33□□□□□ -2.04
UBE3D-205ENST00000503942 TGP01266 2768 aa2.33□□□□□ -2.04
UBE3D-205ENST00000503942 NBEAL2Q6ZNJ1 2754 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 A8MWP6 167 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 CORTO00230 105 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 NDUFA4O00483 81 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 CYB5BO43169 146 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 HSBP1O75506 76 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 CD7P09564 240 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 RD3LP0DJH9 198 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 C8orf88P0DMB2 117 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 SLC25A4P12235 298 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 CBLN1P23435 193 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 CMC4P56277 68 aaPredicted RBP2.32□□□□□ -2.04
UBE3D-205ENST00000503942 TAS2R30P59541 319 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 DEFB1P60022 68 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 SLC38A11Q08AI6 406 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 KPRPQ5T749 579 aaPredicted RBP2.32□□□□□ -2.04
UBE3D-205ENST00000503942 FAM222AQ5U5X8 452 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 MIC13Q5XKP0 118 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 PATE2Q6UY27 113 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 CYP2G1PQ6ZSU1 146 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 TMEM144Q7Z5S9 345 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 FAM24BQ8N5W8 94 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 ST20-AS1Q8NBB2 130 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 TRGV9Q99603 122 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 MGST2Q99735 147 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 CHCHD7Q9BUK0 85 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 PBDC1Q9BVG4 233 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 RHPN1-AS1Q9BWJ2 59 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 SMIM3Q9BZL3 60 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 LYRM2Q9NU23 88 aaPredicted RBP2.32□□□□□ -2.04
UBE3D-205ENST00000503942 DOK5Q9P104 306 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 SMPXQ9UHP9 88 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 HSPB11Q9Y547 144 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 TENM3Q9P273 2699 aa2.32□□□□□ -2.04
UBE3D-205ENST00000503942 FXYD6-FXYD2A0A087WZ82 144 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 TRAV5A0A0B4J249 113 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 PIGBOS1A0A0B4J2F0 54 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 UBE2L5PA0A1B0GUS4 154 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 RLN2P04090 185 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 ORM2P19652 201 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 PMCHP20382 165 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 FGF7P21781 194 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 CRYBB3P26998 211 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 RPL12P30050 165 aaKnown RBP2.31□□□□□ -2.04
UBE3D-205ENST00000503942 SULT1A1P50225 295 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 YPEL3P61236 119 aaPredicted RBP2.31□□□□□ -2.04
UBE3D-205ENST00000503942 AKR1C1Q04828 323 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 C6orf99Q4VX62 202 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 DEFB121Q5J5C9 76 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 SPATA31B1PQ5VZV4 182 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 TCF24Q7RTU0 167 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 DEFB125Q8N687 156 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 MIR7-3HGQ8N6C7 128 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 OR10P1Q8NGE3 313 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 OR5C1Q8NGR4 320 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 OR2T35Q8NGX2 323 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 DYNLRB2Q8TF09 96 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 Q8WTZ3 238 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 TMEM147Q9BVK8 224 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 ARL6Q9H0F7 186 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 VSIRQ9H7M9 311 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 NPVFQ9HCQ7 196 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 DAZ1Q9NQZ3 744 aaKnown RBP2.31□□□□□ -2.04
UBE3D-205ENST00000503942 UQCC1Q9NVA1 299 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 MRPL27Q9P0M9 148 aaKnown RBP2.31□□□□□ -2.04
UBE3D-205ENST00000503942 CACFD1Q9UGQ2 172 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 UFC1Q9Y3C8 167 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 COL7A1Q02388 2944 aa2.31□□□□□ -2.04
UBE3D-205ENST00000503942 DNAH7Q8WXX0 4024 aa2.3□□□□□ -2.04
UBE3D-205ENST00000503942 TRAV30A0A087WSZ9 112 aa2.3□□□□□ -2.04
UBE3D-205ENST00000503942 ZNF98A6NK75 572 aa2.3□□□□□ -2.04
UBE3D-205ENST00000503942 H3BRN7 92 aa2.3□□□□□ -2.04
UBE3D-205ENST00000503942 CXCL2P19875 107 aa2.3□□□□□ -2.04
UBE3D-205ENST00000503942 PVALBP20472 110 aaPredicted RBP2.3□□□□□ -2.04
UBE3D-205ENST00000503942 NPPCP23582 126 aa2.3□□□□□ -2.04
UBE3D-205ENST00000503942 HLA-DMBP28068 263 aa2.3□□□□□ -2.04
UBE3D-205ENST00000503942 S100A11P31949 105 aa2.3□□□□□ -2.04
UBE3D-205ENST00000503942 EIF2B2P49770 351 aaKnown RBP2.3□□□□□ -2.04
UBE3D-205ENST00000503942 INSL3P51460 131 aa2.3□□□□□ -2.04
UBE3D-205ENST00000503942 AP2S1P53680 142 aaPredicted RBP2.3□□□□□ -2.04
UBE3D-205ENST00000503942 PAFAH1B2P68402 229 aa2.3□□□□□ -2.04
UBE3D-205ENST00000503942 RPL18AQ02543 176 aaKnown RBP2.3□□□□□ -2.04
UBE3D-205ENST00000503942 BAXQ07812 192 aa2.3□□□□□ -2.04
UBE3D-205ENST00000503942 RPL7L1Q6DKI1 246 aaKnown RBP2.3□□□□□ -2.04
UBE3D-205ENST00000503942 STX12Q86Y82 276 aa2.3□□□□□ -2.04
UBE3D-205ENST00000503942 BAALCQ8WXS3 180 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms