RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 SAP30O75446 220 aa16.27■□□□□ 0.19
PTPN13-205ENST00000502971 Q6ZWC4 215 aa16.27■□□□□ 0.19
PTPN13-205ENST00000502971 OR2K2Q8NGT1 345 aa16.27■□□□□ 0.19
PTPN13-205ENST00000502971 CMC4P56277 68 aaPredicted RBP16.26■□□□□ 0.19
PTPN13-205ENST00000502971 CLUHP3Q96NS8 147 aa16.26■□□□□ 0.19
PTPN13-205ENST00000502971 EVI2AP22794 236 aa16.25■□□□□ 0.19
PTPN13-205ENST00000502971 FAM19A2Q8N3H0 131 aa16.25■□□□□ 0.19
PTPN13-205ENST00000502971 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.25■□□□□ 0.19
PTPN13-205ENST00000502971 LAMTOR2Q9Y2Q5 125 aa16.25■□□□□ 0.19
PTPN13-205ENST00000502971 IGHV1OR15-1A0A075B7D0 117 aa16.25■□□□□ 0.19
PTPN13-205ENST00000502971 CD7P09564 240 aa16.25■□□□□ 0.19
PTPN13-205ENST00000502971 ZNF124Q15973 351 aa16.25■□□□□ 0.19
PTPN13-205ENST00000502971 M0R381 172 aa16.24■□□□□ 0.19
PTPN13-205ENST00000502971 IGLV1-51P01701 117 aa16.24■□□□□ 0.19
PTPN13-205ENST00000502971 ODF3L2Q3SX64 289 aa16.24■□□□□ 0.19
PTPN13-205ENST00000502971 RBMY1BA6NDE4 496 aaKnown RBP16.23■□□□□ 0.19
PTPN13-205ENST00000502971 RBMY1EA6NEQ0 496 aaKnown RBP16.23■□□□□ 0.19
PTPN13-205ENST00000502971 NXPH4O95158 308 aa16.23■□□□□ 0.19
PTPN13-205ENST00000502971 RBMY1DP0C7P1 496 aaKnown RBP16.23■□□□□ 0.19
PTPN13-205ENST00000502971 CRXO43186 299 aaPredicted RBP16.22■□□□□ 0.19
PTPN13-205ENST00000502971 CDPF1Q6NVV7 123 aa16.22■□□□□ 0.19
PTPN13-205ENST00000502971 PRSS3P2Q8NHM4 247 aa16.22■□□□□ 0.19
PTPN13-205ENST00000502971 IGHV3-16A0A0C4DH30 117 aa16.22■□□□□ 0.19
PTPN13-205ENST00000502971 OR11H12B2RN74 326 aa16.22■□□□□ 0.19
PTPN13-205ENST00000502971 PF4P02776 101 aa16.22■□□□□ 0.19
PTPN13-205ENST00000502971 FXYD7P58549 80 aa16.22■□□□□ 0.19
PTPN13-205ENST00000502971 SMKR1H3BMG3 65 aa16.21■□□□□ 0.19
PTPN13-205ENST00000502971 AGRNO00468 2067 aa16.21■□□□□ 0.19
PTPN13-205ENST00000502971 FA2HQ7L5A8 372 aa16.21■□□□□ 0.19
PTPN13-205ENST00000502971 NCR2O95944 276 aa16.2■□□□□ 0.18
PTPN13-205ENST00000502971 SCGB1D1O95968 90 aa16.2■□□□□ 0.18
PTPN13-205ENST00000502971 NPYP01303 97 aa16.2■□□□□ 0.18
PTPN13-205ENST00000502971 PRIMA1Q86XR5 153 aa16.2■□□□□ 0.18
PTPN13-205ENST00000502971 C9orf85Q96MD7 179 aa16.2■□□□□ 0.18
PTPN13-205ENST00000502971 DPH3P1Q9H4G8 78 aa16.2■□□□□ 0.18
PTPN13-205ENST00000502971 AP5S1Q9NUS5 200 aa16.2■□□□□ 0.18
PTPN13-205ENST00000502971 TRGV11A0A075B6L2 103 aa16.19■□□□□ 0.18
PTPN13-205ENST00000502971 Q8N1Y9 231 aa16.19■□□□□ 0.18
PTPN13-205ENST00000502971 LINC00482Q8N8I6 264 aa16.19■□□□□ 0.18
PTPN13-205ENST00000502971 FAM110AQ9BQ89 295 aa16.19■□□□□ 0.18
PTPN13-205ENST00000502971 SORL1Q92673 2214 aa16.19■□□□□ 0.18
PTPN13-205ENST00000502971 IGHV1-24A0A0C4DH33 117 aa16.19■□□□□ 0.18
PTPN13-205ENST00000502971 IFI27P40305 119 aaPredicted RBP16.19■□□□□ 0.18
PTPN13-205ENST00000502971 MRAP2Q96G30 205 aa16.19■□□□□ 0.18
PTPN13-205ENST00000502971 AP1S3Q96PC3 154 aa16.19■□□□□ 0.18
PTPN13-205ENST00000502971 MAP1LC3AQ9H492 121 aa16.19■□□□□ 0.18
PTPN13-205ENST00000502971 LOC389332A0A1B0GUA5 103 aa16.18■□□□□ 0.18
PTPN13-205ENST00000502971 SPRY2O43597 315 aa16.18■□□□□ 0.18
PTPN13-205ENST00000502971 STHQ8IWL8 128 aa16.18■□□□□ 0.18
PTPN13-205ENST00000502971 C20orf144Q9BQM9 153 aa16.18■□□□□ 0.18
PTPN13-205ENST00000502971 TNFRSF6BO95407 300 aa16.17■□□□□ 0.18
PTPN13-205ENST00000502971 RBMY1A1P0DJD3 496 aaKnown RBP16.17■□□□□ 0.18
PTPN13-205ENST00000502971 RBMY1CP0DJD4 496 aa16.17■□□□□ 0.18
PTPN13-205ENST00000502971 KRTDAPP60985 99 aa16.17■□□□□ 0.18
PTPN13-205ENST00000502971 RBMY1FQ15415 496 aaKnown RBP16.17■□□□□ 0.18
PTPN13-205ENST00000502971 ATRQ13535 2644 aa16.17■□□□□ 0.18
PTPN13-205ENST00000502971 PCP4L1A6NKN8 68 aa16.16■□□□□ 0.18
PTPN13-205ENST00000502971 S100A12P80511 92 aa16.16■□□□□ 0.18
PTPN13-205ENST00000502971 BEAN1Q3B7T3 259 aa16.16■□□□□ 0.18
PTPN13-205ENST00000502971 KRTAP24-1Q3LI83 254 aa16.16■□□□□ 0.18
PTPN13-205ENST00000502971 MDFICQ9P1T7 246 aa16.16■□□□□ 0.18
PTPN13-205ENST00000502971 TRPT1Q86TN4 253 aaKnown RBP16.16■□□□□ 0.18
PTPN13-205ENST00000502971 C14orf178Q8N769 122 aaPredicted RBP16.16■□□□□ 0.18
PTPN13-205ENST00000502971 SYT8Q8NBV8 401 aa16.16■□□□□ 0.18
PTPN13-205ENST00000502971 CBY3A6NI87 242 aa16.15■□□□□ 0.18
PTPN13-205ENST00000502971 GAS8-AS1O95177 125 aa16.15■□□□□ 0.18
PTPN13-205ENST00000502971 PMCHL1Q16048 86 aa16.15■□□□□ 0.18
PTPN13-205ENST00000502971 LINC00467Q9BRT7 94 aa16.15■□□□□ 0.18
PTPN13-205ENST00000502971 WNK1Q9H4A3 2382 aa16.15■□□□□ 0.18
PTPN13-205ENST00000502971 PRSS47A8MTI9 375 aa16.14■□□□□ 0.17
PTPN13-205ENST00000502971 INSP01308 110 aa16.14■□□□□ 0.17
PTPN13-205ENST00000502971 C3orf79P0CE67 100 aa16.14■□□□□ 0.17
PTPN13-205ENST00000502971 DEFB125Q8N687 156 aa16.14■□□□□ 0.17
PTPN13-205ENST00000502971 POM121L12Q8N7R1 296 aa16.14■□□□□ 0.17
PTPN13-205ENST00000502971 GSN-AS1Q9NRJ2 163 aa16.14■□□□□ 0.17
PTPN13-205ENST00000502971 LEPROTL1O95214 131 aa16.14■□□□□ 0.17
PTPN13-205ENST00000502971 NRACQ8N912 160 aa16.14■□□□□ 0.17
PTPN13-205ENST00000502971 CITED1Q99966 193 aa16.14■□□□□ 0.17
PTPN13-205ENST00000502971 NXT2Q9NPJ8 142 aaKnown RBP16.14■□□□□ 0.17
PTPN13-205ENST00000502971 LINC01546A6NGU7 62 aa16.13■□□□□ 0.17
PTPN13-205ENST00000502971 GATA1P15976 413 aaPredicted RBP16.13■□□□□ 0.17
PTPN13-205ENST00000502971 NUTF2P61970 127 aaKnown RBP16.13■□□□□ 0.17
PTPN13-205ENST00000502971 TMEM158Q8WZ71 300 aa16.13■□□□□ 0.17
PTPN13-205ENST00000502971 TRAV26-2A0A0B4J265 109 aa16.12■□□□□ 0.17
PTPN13-205ENST00000502971 SMIM17P0DL12 118 aa16.12■□□□□ 0.17
PTPN13-205ENST00000502971 KIF25-AS1Q9Y6Z4 181 aa16.12■□□□□ 0.17
PTPN13-205ENST00000502971 BTF3P20290 206 aaKnown RBP16.11■□□□□ 0.17
PTPN13-205ENST00000502971 HSPB8Q9UJY1 196 aa16.11■□□□□ 0.17
PTPN13-205ENST00000502971 MUC4Q99102 2169 aa16.11■□□□□ 0.17
PTPN13-205ENST00000502971 MGPP08493 103 aa16.11■□□□□ 0.17
PTPN13-205ENST00000502971 INSL3P51460 131 aa16.11■□□□□ 0.17
PTPN13-205ENST00000502971 Q8N976 141 aa16.11■□□□□ 0.17
PTPN13-205ENST00000502971 C19orf73Q9NVV2 129 aa16.11■□□□□ 0.17
PTPN13-205ENST00000502971 Q8N8P6 123 aa16.1■□□□□ 0.17
PTPN13-205ENST00000502971 LINC01587Q99440 93 aa16.1■□□□□ 0.17
PTPN13-205ENST00000502971 PPP1R17O96001 155 aa16.09■□□□□ 0.17
PTPN13-205ENST00000502971 LINC00315P59091 139 aa16.09■□□□□ 0.17
PTPN13-205ENST00000502971 TEX43Q6ZNM6 134 aa16.08■□□□□ 0.17
PTPN13-205ENST00000502971 TMEM70Q9BUB7 260 aa16.08■□□□□ 0.17
PTPN13-205ENST00000502971 HTN1P15515 57 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms