RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 PRR30Q53SZ7 412 aaPredicted RBP8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 PRDM6Q9NQX0 595 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 KLK9Q9UKQ9 250 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 J3QLI3 93 aa8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 NTF4P34130 210 aa8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 IGHV1-58A0A0C4DH39 117 aa8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 CCL25O15444 150 aa8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 FOXF2Q12947 444 aa8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 Q6ZS49 121 aa8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 GAFA1Q96PS6 74 aa8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 G3V4G9 280 aa8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 CLPSL2Q6UWE3 100 aa8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 Q8N1Y9 231 aa8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 LHFPL1Q86WI0 220 aa8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 FAM110DQ8TAY7 271 aaPredicted RBP8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 WFDC1Q9HC57 220 aa8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 PRYO14603 147 aa8.94□□□□□ -0.98
AC055713.1-201ENST00000498967 SPART-AS1P0CW21 52 aa8.93□□□□□ -0.98
AC055713.1-201ENST00000498967 RBAKDNA6NC62 111 aa8.93□□□□□ -0.98
AC055713.1-201ENST00000498967 NDUFS7O75251 213 aa8.93□□□□□ -0.98
AC055713.1-201ENST00000498967 TMEM14BQ9NUH8 114 aa8.93□□□□□ -0.98
AC055713.1-201ENST00000498967 KLK5Q9Y337 293 aaPredicted RBP8.93□□□□□ -0.98
AC055713.1-201ENST00000498967 TMEM213A2RRL7 107 aa8.93□□□□□ -0.98
AC055713.1-201ENST00000498967 UBE2E1P51965 193 aa8.93□□□□□ -0.98
AC055713.1-201ENST00000498967 IGHV2-70P01814 119 aa8.93□□□□□ -0.98
AC055713.1-201ENST00000498967 RFPL3SP0C7P2 107 aa8.93□□□□□ -0.98
AC055713.1-201ENST00000498967 C11orf52Q96A22 123 aa8.93□□□□□ -0.98
AC055713.1-201ENST00000498967 ADAMTSL1Q8N6G6 1762 aa8.92□□□□□ -0.98
AC055713.1-201ENST00000498967 ELANEP08246 267 aa8.92□□□□□ -0.98
AC055713.1-201ENST00000498967 C9orf106Q8NAJ2 232 aa8.92□□□□□ -0.98
AC055713.1-201ENST00000498967 HIST2H2BDQ6DRA6 164 aa8.92□□□□□ -0.98
AC055713.1-201ENST00000498967 MBD3L4A6NDZ8 208 aaPredicted RBP8.92□□□□□ -0.98
AC055713.1-201ENST00000498967 MBD3L3A6NE82 208 aaPredicted RBP8.92□□□□□ -0.98
AC055713.1-201ENST00000498967 MBD3L5A6NJ08 208 aaPredicted RBP8.92□□□□□ -0.98
AC055713.1-201ENST00000498967 PAQR4Q8N4S7 273 aaPredicted RBP8.92□□□□□ -0.98
AC055713.1-201ENST00000498967 MBD3L2Q8NHZ7 208 aaPredicted RBP8.92□□□□□ -0.98
AC055713.1-201ENST00000498967 EFNA2O43921 213 aa8.92□□□□□ -0.98
AC055713.1-201ENST00000498967 C15orf62A8K5M9 175 aa8.91□□□□□ -0.98
AC055713.1-201ENST00000498967 C10orf55Q5SWW7 151 aa8.91□□□□□ -0.98
AC055713.1-201ENST00000498967 C16orf74Q96GX8 76 aa8.91□□□□□ -0.98
AC055713.1-201ENST00000498967 GATA1P15976 413 aaPredicted RBP8.91□□□□□ -0.98
AC055713.1-201ENST00000498967 FOXI1Q12951 378 aa8.91□□□□□ -0.98
AC055713.1-201ENST00000498967 IGHV1-18A0A0C4DH31 117 aa8.91□□□□□ -0.98
AC055713.1-201ENST00000498967 H3BUA1 57 aa8.91□□□□□ -0.98
AC055713.1-201ENST00000498967 NDUFV3P56181 108 aaKnown RBP8.91□□□□□ -0.98
AC055713.1-201ENST00000498967 HIGD1BQ9P298 99 aa8.91□□□□□ -0.98
AC055713.1-201ENST00000498967 TRAV23DV6A0A075B6W5 121 aa8.91□□□□□ -0.98
AC055713.1-201ENST00000498967 IGLV3-32A0A0A0MS00 114 aa8.91□□□□□ -0.98
AC055713.1-201ENST00000498967 LRRC37AA6NMS7 1700 aa8.91□□□□□ -0.98
AC055713.1-201ENST00000498967 IGHV3-38A0A0C4DH36 116 aa8.91□□□□□ -0.98
AC055713.1-201ENST00000498967 ZNF524Q96C55 264 aa8.9□□□□□ -0.98
AC055713.1-201ENST00000498967 MSMBP08118 114 aa8.9□□□□□ -0.98
AC055713.1-201ENST00000498967 FAM19A3Q7Z5A8 133 aa8.9□□□□□ -0.98
AC055713.1-201ENST00000498967 IGLV3-19P01714 112 aa8.9□□□□□ -0.99
AC055713.1-201ENST00000498967 PMAIP1Q13794 54 aa8.9□□□□□ -0.99
AC055713.1-201ENST00000498967 C20orf197Q8N268 126 aa8.9□□□□□ -0.99
AC055713.1-201ENST00000498967 COX7BP24311 80 aa8.89□□□□□ -0.99
AC055713.1-201ENST00000498967 LECT2O14960 151 aa8.89□□□□□ -0.99
AC055713.1-201ENST00000498967 C5orf38Q86SI9 138 aa8.89□□□□□ -0.99
AC055713.1-201ENST00000498967 GPHB5Q86YW7 130 aa8.89□□□□□ -0.99
AC055713.1-201ENST00000498967 MRPS36P82909 103 aaKnown RBP8.89□□□□□ -0.99
AC055713.1-201ENST00000498967 NOP10Q9NPE3 64 aaKnown RBP8.89□□□□□ -0.99
AC055713.1-201ENST00000498967 C4orf51C9J302 202 aa8.89□□□□□ -0.99
AC055713.1-201ENST00000498967 WISP1O95388 367 aa8.89□□□□□ -0.99
AC055713.1-201ENST00000498967 LMO1P25800 156 aa8.89□□□□□ -0.99
AC055713.1-201ENST00000498967 ADAMTS9Q9P2N4 1935 aa8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 SETD2Q9BYW2 2564 aaPredicted RBP8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 PLXNA3P51805 1871 aa8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 TRBV7-3A0A075B6L6 115 aa8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 WI2-2373I1.2A0A1W2PRP0 233 aa8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 C8orf49Q96NF6 230 aa8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 IMUPQ9GZP8 106 aa8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 C1QCP02747 245 aa8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 RSPO4Q2I0M5 234 aaPredicted RBP8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 WIPF2Q8TF74 440 aaPredicted RBP8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 CENPVL3A0A0U1RRI6 287 aa8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 K7EM74 188 aa8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 COL11A2P13942 1736 aaPredicted RBP8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 BRD3OSQ6XYD6 125 aa8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 COLQQ9Y215 455 aaPredicted RBP8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 USP9XQ93008 2570 aaPredicted RBP8.88□□□□□ -0.99
AC055713.1-201ENST00000498967 IGLC1P0CG04 106 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 BTCP35070 178 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 A0A1B0GUS0 222 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 GYPEP15421 78 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 PRR20EP86478 221 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 PRR20CP86479 221 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 PRR20DP86480 221 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 PRR20BP86481 221 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 PRR20AP86496 221 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 LINC00114Q6XXX2 140 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 TRAV26-1A0A087WT03 109 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 PRR4Q16378 134 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 TNS1Q9HBL0 1735 aaKnown RBP8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 VOPP1Q96AW1 172 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 LINC00479Q96M42 142 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 IGKV1-9A0A0C4DH69 117 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 C9orf66Q5T8R8 295 aa8.87□□□□□ -0.99
AC055713.1-201ENST00000498967 K7EQD1 137 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms