RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 OR5AS1Q8N127 324 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 TCTEX1D1Q8N7M0 179 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 OR4S1Q8NGB4 309 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 OR4B1Q8NGF8 309 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 OR5D16Q8NGK9 328 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 ZNF714Q96N38 554 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 ODF3Q96PU9 254 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 C20orf78Q9BR46 151 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 GINS4Q9BRT9 223 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 TCEAL7Q9BRU2 100 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 SNRNP25Q9BV90 132 aaKnown RBP0.43□□□□□ -2.34
TRBVA-201ENST00000498804 BPESC1Q9GZL8 116 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 TMEM191AQ9H0A3 160 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 CST11Q9H112 138 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 NPVFQ9HCQ7 196 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 FAIMQ9NVQ4 179 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 TXNL4BQ9NX01 149 aaKnown RBP0.43□□□□□ -2.34
TRBVA-201ENST00000498804 NDUFA12Q9UI09 145 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 RIC1Q4ADV7 1423 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 PSME4Q14997 1843 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 EXPH5Q8NEV8 1989 aa0.43□□□□□ -2.34
TRBVA-201ENST00000498804 PTPRDP23468 1912 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 LOC285556D6RIA3 1793 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 SIPA1L3O60292 1781 aaPredicted RBP0.42□□□□□ -2.34
TRBVA-201ENST00000498804 KDM3BQ7LBC6 1761 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 NESP48681 1621 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 ALKQ9UM73 1620 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 ITSN1Q15811 1721 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 NRXN2Q9P2S2 1712 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 CPSF1Q10570 1443 aaKnown RBP0.42□□□□□ -2.34
TRBVA-201ENST00000498804 C10orf71Q711Q0 1435 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 TRAV17A0A0B4J275 112 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 TEX49A0A1B0GTD5 131 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 CXorf51AA0A1B0GTR3 108 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 A0A1W2PRS3 328 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 hADV29S1A0JD25 119 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 hDV103S1A0JD37 113 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 IFITM5A6NNB3 132 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 MCRIP1C9JLW8 97 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 H3BQF6 201 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 M0R233 179 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 SDCBPO00560 298 aaPredicted RBP0.42□□□□□ -2.34
TRBVA-201ENST00000498804 PFDN1O60925 122 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 NCR2O95944 276 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 IGLV3-1P01715 115 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 PMP2P02689 132 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 PIRTP0C851 137 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 SLC25A6P12236 298 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 IL7P13232 177 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 IL9P15248 144 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 ADCYAP1P18509 176 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 NFYAP23511 347 aaPredicted RBP0.42□□□□□ -2.34
TRBVA-201ENST00000498804 ASIPP42127 132 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 FXYD7P58549 80 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 TPPP2P59282 170 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 UBE2G1P62253 170 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 CNBPP62633 177 aaKnown RBP0.42□□□□□ -2.34
TRBVA-201ENST00000498804 ZNF90Q03938 601 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 IQCJQ1A5X6 159 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 WHAMMP3Q1A5X7 153 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 EIF5AL1Q6IS14 154 aaKnown RBP0.42□□□□□ -2.34
TRBVA-201ENST00000498804 SFTA2Q6UW10 78 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 SBSPONQ8IVN8 264 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 C10orf111Q8N326 155 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 C10orf126Q8N4M7 172 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 KCNRGQ8N5I3 272 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 LINC00301Q8NCQ3 95 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 LINC00526Q96FQ7 95 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 HYLS1Q96M11 299 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 TCEAL2Q9H3H9 227 aaPredicted RBP0.42□□□□□ -2.34
TRBVA-201ENST00000498804 DPH3P1Q9H4G8 78 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 RERGLQ9H628 205 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 XAGE1AQ9HD64 81 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 NOP16Q9Y3C1 178 aaKnown RBP0.42□□□□□ -2.34
TRBVA-201ENST00000498804 MPC1Q9Y5U8 109 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 SERP1Q9Y6X1 66 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 CASP8AP2Q9UKL3 1982 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 HMGXB3Q12766 1538 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 MYO18AQ92614 2054 aaKnown RBP0.42□□□□□ -2.34
TRBVA-201ENST00000498804 DLG5Q8TDM6 1919 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 LTN1O94822 1766 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 RGPD4Q7Z3J3 1758 aa0.42□□□□□ -2.34
TRBVA-201ENST00000498804 POLA1P09884 1462 aaPredicted RBP0.41□□□□□ -2.34
TRBVA-201ENST00000498804 PLXNA1Q9UIW2 1896 aa0.41□□□□□ -2.34
TRBVA-201ENST00000498804 TET1Q8NFU7 2136 aa0.41□□□□□ -2.34
TRBVA-201ENST00000498804 TNS1Q9HBL0 1735 aaKnown RBP0.41□□□□□ -2.34
TRBVA-201ENST00000498804 BAZ1AQ9NRL2 1556 aaPredicted RBP0.41□□□□□ -2.34
TRBVA-201ENST00000498804 HEATR5BQ9P2D3 2071 aa0.41□□□□□ -2.34
TRBVA-201ENST00000498804 TROQ12816 1431 aaPredicted RBP0.41□□□□□ -2.34
TRBVA-201ENST00000498804 SCAPERQ9BY12 1400 aa0.41□□□□□ -2.34
TRBVA-201ENST00000498804 ZNF142P52746 1687 aaPredicted RBP0.41□□□□□ -2.34
TRBVA-201ENST00000498804 KIF1AQ12756 1690 aa0.41□□□□□ -2.34
TRBVA-201ENST00000498804 MYH8P13535 1937 aa0.41□□□□□ -2.34
TRBVA-201ENST00000498804 BAZ2BQ9UIF8 2168 aaKnown RBP0.41□□□□□ -2.34
TRBVA-201ENST00000498804 A0A087WSZ3 146 aa0.41□□□□□ -2.34
TRBVA-201ENST00000498804 A0A087WTM6 91 aa0.41□□□□□ -2.34
TRBVA-201ENST00000498804 TRAV12-1A0A0B4J245 112 aa0.41□□□□□ -2.34
TRBVA-201ENST00000498804 IGHV1-24A0A0C4DH33 117 aa0.41□□□□□ -2.34
TRBVA-201ENST00000498804 IGKV3D-7A0A0C4DH55 119 aa0.41□□□□□ -2.34
TRBVA-201ENST00000498804 IGKV3OR2-268A0A0C4DH90 116 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms