RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 TMEM106AQ96A25 262 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 MGLLQ99685 303 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 TAF9BQ9HBM6 251 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 XAGE1AQ9HD64 81 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 TP53TG3Q9ULZ0 132 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 PCM1Q15154 2024 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 CITO14578 2027 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 PKHD1L1Q86WI1 4243 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 DNAH6Q9C0G6 4158 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 FAM92AA1XBS5 289 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 SOD1P00441 154 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 IGHV3-7P01780 117 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 GPX1P07203 203 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 MPV17P39210 176 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 FOXA1P55317 472 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 YPEL3P61236 119 aaPredicted RBP2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 COPZ1P61923 177 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 HIST1H4AP62805 103 aaKnown RBP2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 HBBP68871 147 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 TFF3Q07654 80 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 ZNF181Q2M3W8 571 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 ZNF705AQ6ZN79 300 aaPredicted RBP2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 C2orf91Q6ZV80 131 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 PDZD9Q8IXQ8 264 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 SMCR5Q8TEV8 140 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 ZNF418Q8TF45 676 aaPredicted RBP2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 MND1Q9BWT6 205 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 TCEAL2Q9H3H9 227 aaPredicted RBP2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 OSTCQ9NRP0 149 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 MARCOQ9UEW3 520 aaPredicted RBP2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 TRAPPC1Q9Y5R8 145 aa2.27□□□□□ -2.05
EXOSC3-208ENST00000496910 NYNRINQ9P2P1 1898 aaKnown RBP2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 IGHV3-73A0A0B4J1V6 119 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 C17orf98A8MV24 154 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 H3BMG7 143 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 H3BQ85 93 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 NPFFO15130 113 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 GGCTO75223 188 aaKnown RBP2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 WISP3O95389 354 aaPredicted RBP2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 ZNF728P0DKX0 622 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 ZNF19P17023 458 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 RPL22P35268 128 aaKnown RBP2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 NDPQ00604 133 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 DIAPH2-AS1Q14236 149 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 C2orf83Q53S99 150 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 GLIPR1L1Q6UWM5 242 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 MIR17HGQ75NE6 70 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 TRAPPC6BQ86SZ2 158 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 CTAGE3PQ8IX95 158 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 HIST3H2BBQ8N257 126 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 C10orf126Q8N4M7 172 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 C1orf64Q8NEQ6 169 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 OR4S1Q8NGB4 309 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 ADAT1Q9BUB4 502 aaKnown RBP2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 SMDT1Q9H4I9 107 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 NIT2Q9NQR4 276 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 ZNF443Q9Y2A4 671 aaPredicted RBP2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 KIF25-AS1Q9Y6Z4 181 aa2.26□□□□□ -2.05
EXOSC3-208ENST00000496910 MYH4Q9Y623 1939 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 DSPPQ9NZW4 1301 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 TRAV13-1A0A0B4J241 112 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 FAM236AA0A1B0GUQ0 79 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 FAM236BA0A1B0GV22 79 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 ZNF727A8MUV8 499 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 C16orf90A8MZG2 172 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 GGTLC3B5MD39 225 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 J3QR89 54 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 CORTO00230 105 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 UBFD1O14562 309 aaKnown RBP2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 NPYP01303 97 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 FOXA3P55318 350 aaPredicted RBP2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 NDUFA6P56556 154 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 AKR1C1Q04828 323 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 ZNF816Q0VGE8 651 aaPredicted RBP2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 FOXF1Q12946 379 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 ZNF79Q15937 498 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 MIAQ16674 131 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 TMEM69Q5SWH9 247 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 ZNF660Q6AZW8 331 aaPredicted RBP2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 C22orf39Q6P5X5 142 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 LYZL2Q7Z4W2 148 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 IFT20Q8IY31 132 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 PFN4Q8NHR9 129 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 UBALD1Q8TB05 177 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 NAT14Q8WUY8 206 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 HIST1H2BLQ99880 126 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 ZNF471Q9BX82 626 aaPredicted RBP2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 REG4Q9BYZ8 158 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 EPDR1Q9UM22 224 aa2.25□□□□□ -2.05
EXOSC3-208ENST00000496910 VPS13BQ7Z7G8 4022 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 MYH9P35579 1960 aaKnown RBP2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 IGLV3-9A0A075B6K5 115 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 IGHV3-15A0A0B4J1V0 119 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 TRBV27A0A0K0K1C4 114 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 GRIFINA4D1Z8 144 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 MEIS3P1A6NDR6 274 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 ZNF670-ZNF695F2Z2N8 137 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 H3BT86 120 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 SLC22A1O15245 554 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 TCRAP04437 139 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms