RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 HEATR5AQ86XA9 2040 aa2.38□□□□□ -2.03
CCDC39-207ENST00000495817 OR5A2Q8NGI9 324 aa2.38□□□□□ -2.03
CCDC39-207ENST00000495817 STAG3L4Q8TBR4 150 aa2.38□□□□□ -2.03
CCDC39-207ENST00000495817 HIST1H2BHQ93079 126 aa2.38□□□□□ -2.03
CCDC39-207ENST00000495817 TEX37Q96LM6 180 aa2.38□□□□□ -2.03
CCDC39-207ENST00000495817 HIST1H2BNQ99877 126 aa2.38□□□□□ -2.03
CCDC39-207ENST00000495817 HIST1H2BMQ99879 126 aa2.38□□□□□ -2.03
CCDC39-207ENST00000495817 MRPL57Q9BQC6 102 aaKnown RBP2.38□□□□□ -2.03
CCDC39-207ENST00000495817 ANKRD11Q6UB99 2663 aaPredicted RBP2.38□□□□□ -2.03
CCDC39-207ENST00000495817 FAM208BQ5VWN6 2430 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 I3L521 148 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 K7ERJ3 54 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 CCL16O15467 120 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 MPC2O95563 127 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 NCR2O95944 276 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 NAPSAO96009 420 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 PRB1P04280 392 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 SRP19P09132 144 aaKnown RBP2.37□□□□□ -2.03
CCDC39-207ENST00000495817 AKAIN1P0CW23 69 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 FABP2P12104 132 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 TMBIM6P55061 237 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 S100A10P60903 97 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 ERHP84090 104 aaKnown RBP2.37□□□□□ -2.03
CCDC39-207ENST00000495817 TPRXLQ17RH7 258 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 LCN15Q6UWW0 184 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 LINC00471Q8N535 108 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 WFDC11Q8NEX6 87 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 OR5D14Q8NGL3 314 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 C2orf50Q96LR7 162 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 SDF2Q99470 211 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 ADAT1Q9BUB4 502 aaKnown RBP2.37□□□□□ -2.03
CCDC39-207ENST00000495817 RNF122Q9H9V4 155 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 CKLFQ9UBR5 152 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 SCN8AQ9UQD0 1980 aa2.37□□□□□ -2.03
CCDC39-207ENST00000495817 FASNP49327 2511 aaKnown RBP2.37□□□□□ -2.03
CCDC39-207ENST00000495817 SPENQ96T58 3664 aaKnown RBP2.37□□□□□ -2.03
CCDC39-207ENST00000495817 PTPRDP23468 1912 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 KALRNO60229 2985 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 IGSF10Q6WRI0 2623 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 A0A0D9SEW6 157 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 IRGMA1A4Y4 181 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 C7orf71A4D174 169 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 C1QAP02745 245 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 CASP1P29466 404 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 PEBP1P30086 187 aaKnown RBP2.36□□□□□ -2.03
CCDC39-207ENST00000495817 BRS3P32247 399 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 GUCA1AP43080 201 aaPredicted RBP2.36□□□□□ -2.03
CCDC39-207ENST00000495817 RPL26P61254 145 aaKnown RBP2.36□□□□□ -2.03
CCDC39-207ENST00000495817 HSD17B12Q53GQ0 312 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 MEIG1Q5JSS6 88 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 COL5A1-AS1Q5SY13 56 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 AADACL3Q5VUY0 350 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 LINC00305Q7Z4B0 112 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 OR4S1Q8NGB4 309 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 OR8D4Q8NGM9 314 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 WFDC5Q8TCV5 224 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 TMEM133Q9H2Q1 129 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 IL36BQ9NZH7 164 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 RPL26L1Q9UNX3 145 aaKnown RBP2.36□□□□□ -2.03
CCDC39-207ENST00000495817 FUT9Q9Y231 359 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 MAST4O15021 2626 aa2.36□□□□□ -2.03
CCDC39-207ENST00000495817 TMSB15BA0A087X1C1 80 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 IGHV1-58A0A0C4DH39 117 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 CREBL2O60519 120 aaPredicted RBP2.35□□□□□ -2.03
CCDC39-207ENST00000495817 CST7O76096 145 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 TCRAP04437 139 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 CSN1S1P47710 185 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 FOXA3P55318 350 aaPredicted RBP2.35□□□□□ -2.03
CCDC39-207ENST00000495817 ARPP19P56211 112 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 UBE2BP63146 152 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 PLGLB1Q02325 96 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 HSD52Q0P140 79 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 PCOTHQ58A44 107 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 GTF2H5Q6ZYL4 71 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 GKN2Q86XP6 184 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 DYNAPQ8N1N2 210 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 MAGOHBQ96A72 148 aaKnown RBP2.35□□□□□ -2.03
CCDC39-207ENST00000495817 OR4C12Q96R67 309 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 IMMP2LQ96T52 175 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 DERL1Q9BUN8 251 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 TMEM191AQ9H0A3 160 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 METTL1Q9UBP6 276 aaKnown RBP2.35□□□□□ -2.03
CCDC39-207ENST00000495817 TIMM9Q9Y5J7 89 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 CFAP46Q8IYW2 2715 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 CPAMD8Q8IZJ3 1885 aa2.35□□□□□ -2.03
CCDC39-207ENST00000495817 BAZ2BQ9UIF8 2168 aaKnown RBP2.34□□□□□ -2.03
CCDC39-207ENST00000495817 RELNP78509 3460 aa2.34□□□□□ -2.03
CCDC39-207ENST00000495817 TRAV27A0A087WT01 109 aa2.34□□□□□ -2.03
CCDC39-207ENST00000495817 MEIS3P1A6NDR6 274 aa2.34□□□□□ -2.03
CCDC39-207ENST00000495817 BBIP1A8MTZ0 92 aa2.34□□□□□ -2.03
CCDC39-207ENST00000495817 ZNF727A8MUV8 499 aa2.34□□□□□ -2.03
CCDC39-207ENST00000495817 H3BQF6 201 aa2.34□□□□□ -2.03
CCDC39-207ENST00000495817 J3QKU1 62 aa2.34□□□□□ -2.03
CCDC39-207ENST00000495817 PRM2P04554 102 aa2.34□□□□□ -2.03
CCDC39-207ENST00000495817 CD2P06729 351 aa2.34□□□□□ -2.03
CCDC39-207ENST00000495817 RNASE4P34096 147 aaKnown RBP2.34□□□□□ -2.03
CCDC39-207ENST00000495817 AQP4P55087 323 aa2.34□□□□□ -2.03
CCDC39-207ENST00000495817 TPPP2P59282 170 aa2.34□□□□□ -2.03
CCDC39-207ENST00000495817 CCL20P78556 96 aa2.34□□□□□ -2.03
CCDC39-207ENST00000495817 MYL5Q02045 173 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms