RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 A0A0J9YY99 117 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 ZNF727A8MUV8 499 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 P01737 135 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 RPS20P60866 119 aaKnown RBP8.75□□□□□ -1.01
TRA2A-209ENST00000494255 LGALS9CQ6DKI2 356 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 SMDT1Q9H4I9 107 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 PHLDA3Q9Y5J5 127 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 CSMD3Q7Z407 3707 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 MUC4Q99102 2169 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 TENM2Q9NT68 2774 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 XKRY2A2RUG3 117 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 C19orf71A6NCJ1 209 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 NUDT3O95989 172 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 SFTA3P0C7M3 94 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 MED14OSP0DP75 135 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 PIK3CD-AS1Q5SR53 167 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 OR2D3Q8NGH3 330 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 OCC1Q8TAD7 63 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 ZNF479Q96JC4 524 aa8.75□□□□□ -1.01
TRA2A-209ENST00000494255 H3BNG1 76 aa8.74□□□□□ -1.01
TRA2A-209ENST00000494255 P0DMU3 169 aa8.74□□□□□ -1.01
TRA2A-209ENST00000494255 FAM231AP0DMU4 169 aa8.74□□□□□ -1.01
TRA2A-209ENST00000494255 FAM231CP0DMU5 169 aa8.74□□□□□ -1.01
TRA2A-209ENST00000494255 FHL2Q14192 279 aa8.74□□□□□ -1.01
TRA2A-209ENST00000494255 POM121L12Q8N7R1 296 aa8.74□□□□□ -1.01
TRA2A-209ENST00000494255 PRO0255Q9UI72 69 aa8.74□□□□□ -1.01
TRA2A-209ENST00000494255 HHLA3Q9XRX5 114 aa8.74□□□□□ -1.01
TRA2A-209ENST00000494255 LY96Q9Y6Y9 160 aa8.74□□□□□ -1.01
TRA2A-209ENST00000494255 K7EN84 100 aa8.73□□□□□ -1.01
TRA2A-209ENST00000494255 RS1O15537 224 aa8.73□□□□□ -1.01
TRA2A-209ENST00000494255 PAX4O43316 350 aa8.73□□□□□ -1.01
TRA2A-209ENST00000494255 CIDEAO60543 219 aa8.73□□□□□ -1.01
TRA2A-209ENST00000494255 IFITM2Q01629 132 aa8.73□□□□□ -1.01
TRA2A-209ENST00000494255 FAM74A3Q4VXF1 159 aa8.73□□□□□ -1.01
TRA2A-209ENST00000494255 ZNF575Q86XF7 245 aa8.73□□□□□ -1.01
TRA2A-209ENST00000494255 ZFP82Q8N141 532 aa8.73□□□□□ -1.01
TRA2A-209ENST00000494255 SCRT2Q9NQ03 307 aa8.73□□□□□ -1.01
TRA2A-209ENST00000494255 STARD9Q9P2P6 4700 aa8.73□□□□□ -1.01
TRA2A-209ENST00000494255 A8MWV9 139 aa8.72□□□□□ -1.01
TRA2A-209ENST00000494255 M0R381 172 aa8.72□□□□□ -1.01
TRA2A-209ENST00000494255 SRSF3P84103 164 aaKnown RBP8.72□□□□□ -1.01
TRA2A-209ENST00000494255 CLLU1Q5K131 121 aa8.72□□□□□ -1.01
TRA2A-209ENST00000494255 CFAP126Q5VTH2 177 aa8.72□□□□□ -1.01
TRA2A-209ENST00000494255 DMRTA1Q5VZB9 504 aa8.72□□□□□ -1.01
TRA2A-209ENST00000494255 NUDT10Q8NFP7 164 aa8.72□□□□□ -1.01
TRA2A-209ENST00000494255 NUDT11Q96G61 164 aa8.72□□□□□ -1.01
TRA2A-209ENST00000494255 OR5AL1P0C617 328 aa8.72□□□□□ -1.01
TRA2A-209ENST00000494255 CRYBA4P53673 196 aa8.72□□□□□ -1.01
TRA2A-209ENST00000494255 UBE2DNLQ8IWF7 75 aa8.72□□□□□ -1.01
TRA2A-209ENST00000494255 VSIG2Q96IQ7 327 aa8.72□□□□□ -1.01
TRA2A-209ENST00000494255 C9JQL5 133 aa8.71□□□□□ -1.02
TRA2A-209ENST00000494255 SNAI2O43623 268 aa8.71□□□□□ -1.02
TRA2A-209ENST00000494255 GZMBP10144 247 aa8.71□□□□□ -1.02
TRA2A-209ENST00000494255 TMEM241Q24JQ0 296 aa8.71□□□□□ -1.02
TRA2A-209ENST00000494255 SPANXN1Q5VSR9 72 aa8.71□□□□□ -1.02
TRA2A-209ENST00000494255 FER1L6-AS1Q8NA97 138 aa8.71□□□□□ -1.02
TRA2A-209ENST00000494255 TPPP3Q9BW30 176 aa8.71□□□□□ -1.02
TRA2A-209ENST00000494255 RNASE7Q9H1E1 156 aaKnown RBP8.71□□□□□ -1.02
TRA2A-209ENST00000494255 RPP21Q9H633 154 aaKnown RBP8.71□□□□□ -1.02
TRA2A-209ENST00000494255 ICOSQ9Y6W8 199 aa8.71□□□□□ -1.02
TRA2A-209ENST00000494255 IGHV3-73A0A0B4J1V6 119 aa8.7□□□□□ -1.02
TRA2A-209ENST00000494255 RHODO00212 210 aa8.7□□□□□ -1.02
TRA2A-209ENST00000494255 GATCO43716 136 aaKnown RBP8.7□□□□□ -1.02
TRA2A-209ENST00000494255 GATA1P15976 413 aaPredicted RBP8.7□□□□□ -1.02
TRA2A-209ENST00000494255 ERVFC1-1P60608 527 aa8.7□□□□□ -1.02
TRA2A-209ENST00000494255 SOHLH1Q5JUK2 328 aa8.7□□□□□ -1.02
TRA2A-209ENST00000494255 ZFP2Q6ZN57 461 aa8.7□□□□□ -1.02
TRA2A-209ENST00000494255 FAM231DQ6ZW35 169 aa8.7□□□□□ -1.02
TRA2A-209ENST00000494255 LINC01551Q86U37 167 aa8.7□□□□□ -1.02
TRA2A-209ENST00000494255 SSBP4Q9BWG4 385 aaPredicted RBP8.7□□□□□ -1.02
TRA2A-209ENST00000494255 NACAE9PAV3 2078 aa8.7□□□□□ -1.02
TRA2A-209ENST00000494255 CCL18P55774 89 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 MRPL23Q16540 153 aaKnown RBP8.69□□□□□ -1.02
TRA2A-209ENST00000494255 OR10AG1Q8NH19 301 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 JPT2Q9H910 190 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 NAT8Q9UHE5 227 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 MUC21A0A0G2JKD1 596 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 MUC21A0A140T8X8 626 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 A0A1W2PPQ1 181 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 F2Z2F3 143 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 NXPH4O95158 308 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 IGLC6P0CF74 106 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 SSTP61278 116 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 RNF212Q495C1 297 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 FAM74A4Q5TZK3 123 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 SFRP2Q96HF1 295 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 PRADC1Q9BSG0 188 aa8.69□□□□□ -1.02
TRA2A-209ENST00000494255 A0A096LPF7 62 aa8.68□□□□□ -1.02
TRA2A-209ENST00000494255 GYPEP15421 78 aa8.68□□□□□ -1.02
TRA2A-209ENST00000494255 CACNG7P62955 275 aa8.68□□□□□ -1.02
TRA2A-209ENST00000494255 ADIRFQ15847 76 aa8.68□□□□□ -1.02
TRA2A-209ENST00000494255 C15orf54Q8N8G6 183 aa8.68□□□□□ -1.02
TRA2A-209ENST00000494255 DYNC2H1Q8NCM8 4307 aaKnown RBP8.67□□□□□ -1.02
TRA2A-209ENST00000494255 A0A087WWL8 130 aa8.67□□□□□ -1.02
TRA2A-209ENST00000494255 TRBV6-4A0A1B0GX49 114 aa8.67□□□□□ -1.02
TRA2A-209ENST00000494255 A8MWL6 223 aa8.67□□□□□ -1.02
TRA2A-209ENST00000494255 RHOHQ15669 191 aa8.67□□□□□ -1.02
TRA2A-209ENST00000494255 LYZL1Q6UWQ5 148 aa8.67□□□□□ -1.02
TRA2A-209ENST00000494255 SLC25A29Q8N8R3 303 aa8.67□□□□□ -1.02
TRA2A-209ENST00000494255 SAMD10Q9BYL1 202 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms