RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 TAL2Q16559 108 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 HIST2H2BEQ16778 126 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 C10orf113Q5VZT2 155 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 MRPL54Q6P161 138 aaKnown RBP5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 HIST1H2BHQ93079 126 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 C16orf92Q96LL3 132 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 HIST1H2BNQ99877 126 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 HIST1H2BMQ99879 126 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 TMEM70Q9BUB7 260 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 MLST8Q9BVC4 326 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 EIF5A2Q9GZV4 153 aaKnown RBP5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 SLC35B3Q9H1N7 401 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 HERC2O95714 4834 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 TRAV2A0A0B4J234 112 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 C7orf77A4D0Y5 90 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 A6NDN8 102 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 H7BYZ3 331 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 K7EN84 100 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 DEFB4AO15263 64 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 IGHV3-48P01763 117 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 BCL2P10415 239 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 ADCYAP1P18509 176 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 ORM2P19652 201 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 HNRNPA3P51991 378 aaKnown RBP5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 DEFB131AP59861 70 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 ZNF726P1Q15940 193 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 MLANAQ16655 118 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 OR10J3Q5JRS4 329 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 LCN15Q6UWW0 184 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 FOXI2Q6ZQN5 318 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 FAM19A5Q7Z5A7 132 aaPredicted RBP5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 VAMP8Q9BV40 100 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 MS4A6AQ9H2W1 248 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 VSIRQ9H7M9 311 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 TMEM14CQ9P0S9 112 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 HIGD1AQ9Y241 93 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 DNAH6Q9C0G6 4158 aa5.7□□□□□ -1.5
SEMA3F-209ENST00000493743 VPS13DQ5THJ4 4388 aa5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 IGLL5B9A064 214 aa5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 C11orf94C9JXX5 98 aa5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 APOHP02749 345 aaPredicted RBP5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 RPL11P62913 178 aaKnown RBP5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 TEX43Q6ZNM6 134 aa5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 LINC00336Q6ZUF6 198 aa5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 LYPD1Q8N2G4 141 aa5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 Q8NAQ8 132 aa5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 TMEM37Q8WXS4 190 aa5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 SCRT1Q9BWW7 348 aa5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 ZFAND3Q9H8U3 227 aa5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 SLC25A22Q9H936 323 aa5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 APLNQ9ULZ1 77 aa5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 RFNGQ9Y644 331 aa5.69□□□□□ -1.5
SEMA3F-209ENST00000493743 PCLOQ9Y6V0 5065 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 IGHV3-66A0A0C4DH42 116 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 A0A1W2PS18 150 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 B4DEV8 164 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 ARL14EPLP0DKL9 152 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 MIFP14174 115 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 GCHFRP30047 84 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 ZNF90Q03938 601 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 PDE6HQ13956 83 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 LINC01620Q4KN68 170 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 SOHLH1Q5JUK2 328 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 MORN3Q6PF18 240 aaPredicted RBP5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 LINC00305Q7Z4B0 112 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 BPIFA4PQ86YQ2 179 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 STPG4Q8N801 248 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 OR1B1Q8NGR6 318 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 BLNKQ8WV28 456 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 NIPSNAP3BQ9BS92 247 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 MRPL36Q9P0J6 103 aaKnown RBP5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 GNG13Q9P2W3 67 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 RABAC1Q9UI14 185 aa5.68□□□□□ -1.5
SEMA3F-209ENST00000493743 IGHV4-28A0A0C4DH34 117 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 ZNF705FA8MVS1 300 aaPredicted RBP5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 H3BQ15 152 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 K7EQG2 157 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 ZNF253O75346 499 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 SFTA3P0C7M3 94 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 ZNF705DP0CH99 300 aaPredicted RBP5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 ZNF705BP0CI00 300 aaPredicted RBP5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 RBMY1A1P0DJD3 496 aaKnown RBP5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 RBMY1CP0DJD4 496 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 RPL7P18124 248 aaKnown RBP5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 NPPCP23582 126 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 HLA-DMBP28068 263 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 RPL13AP40429 203 aaKnown RBP5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 CCL20P78556 96 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 PNRC1Q12796 327 aaPredicted RBP5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 ICAM4Q14773 271 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 RBMY1FQ15415 496 aaKnown RBP5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 TIGITQ495A1 244 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 PATE2Q6UY27 113 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 TRPT1Q86TN4 253 aaKnown RBP5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 FAM167A-AS1Q96KT0 104 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 AP1S3Q96PC3 154 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 METTL26Q96S19 204 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 SHANK2-AS3Q9BTD1 123 aa5.67□□□□□ -1.5
SEMA3F-209ENST00000493743 PAXXQ9BUH6 204 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms