RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 B5MCH6 92 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 CRXO43186 299 aaPredicted RBP8.77□□□□□ -1.01
UPF3A-210ENST00000493727 P01737 135 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 ORM1P02763 201 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 Q6AWC8 147 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 CEMP1Q6PRD7 247 aaPredicted RBP8.77□□□□□ -1.01
UPF3A-210ENST00000493727 C15orf54Q8N8G6 183 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 ISOC2Q96AB3 205 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 LINC01587Q99440 93 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 C20orf144Q9BQM9 153 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 DNAH2Q9P225 4427 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 H7BYZ3 331 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 GATCO43716 136 aaKnown RBP8.76□□□□□ -1.01
UPF3A-210ENST00000493727 LY6G6CO95867 125 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 GIG44P09565 113 aaPredicted RBP8.76□□□□□ -1.01
UPF3A-210ENST00000493727 HTN1P15515 57 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 CRIP1P50238 77 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 MUC21Q5SSG8 566 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 C10orf91Q5T1B1 145 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 IBA57Q5T440 356 aaKnown RBP8.76□□□□□ -1.01
UPF3A-210ENST00000493727 FAM159AQ6UWV7 190 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 TMEM256Q8N2U0 113 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 SVBPQ8N300 66 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 RNASE7Q9H1E1 156 aaKnown RBP8.76□□□□□ -1.01
UPF3A-210ENST00000493727 IGHV1OR15-1A0A075B7D0 117 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 TMSB15BA0A087X1C1 80 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 TMEM189A5PLL7 270 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 ZNF705GA8MUZ8 300 aaPredicted RBP8.75□□□□□ -1.01
UPF3A-210ENST00000493727 B4DEV8 164 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 PTTG1IPP53801 180 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 Q6ZQT7 251 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 Q8N1X5 172 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 SFRP2Q96HF1 295 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 PYGO2Q9BRQ0 406 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 DYNC1H1Q14204 4646 aaKnown RBP8.74□□□□□ -1.01
UPF3A-210ENST00000493727 C19orf71A6NCJ1 209 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 CBY3A6NI87 242 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 ATP6V1G1O75348 118 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 ZNF324O75467 553 aaPredicted RBP8.74□□□□□ -1.01
UPF3A-210ENST00000493727 SNAPINO95295 136 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 RBMY1A1P0DJD3 496 aaKnown RBP8.74□□□□□ -1.01
UPF3A-210ENST00000493727 RBMY1CP0DJD4 496 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 RBMY1FQ15415 496 aaKnown RBP8.74□□□□□ -1.01
UPF3A-210ENST00000493727 ANXA2RQ3ZCQ2 193 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 FAM231DQ6ZW35 169 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 C1orf158Q8N1D5 194 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 OR2D3Q8NGH3 330 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 OR10G8Q8NGN5 311 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 KCNS1Q96KK3 526 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 RPP21Q9H633 154 aaKnown RBP8.74□□□□□ -1.01
UPF3A-210ENST00000493727 OSTCQ9NRP0 149 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 TRGV11A0A075B6L2 103 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 XKRY2A2RUG3 117 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 PPP1R2P9O14990 202 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 MT-ND4LP03901 98 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 RPS20P60866 119 aaKnown RBP8.73□□□□□ -1.01
UPF3A-210ENST00000493727 RPL19P84098 196 aaKnown RBP8.73□□□□□ -1.01
UPF3A-210ENST00000493727 RHEBQ15382 184 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 CSNK1G2-AS1Q8NCQ2 148 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 C11orf21Q9P2W6 132 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 S100A4P26447 101 aaKnown RBP8.72□□□□□ -1.01
UPF3A-210ENST00000493727 ASIPP42127 132 aa8.72□□□□□ -1.01
UPF3A-210ENST00000493727 RRN3P1Q2M238 152 aa8.72□□□□□ -1.01
UPF3A-210ENST00000493727 RNF212Q495C1 297 aa8.72□□□□□ -1.01
UPF3A-210ENST00000493727 C11orf68Q9H3H3 251 aaKnown RBP8.72□□□□□ -1.01
UPF3A-210ENST00000493727 RPS10P5Q9NQ39 176 aa8.72□□□□□ -1.01
UPF3A-210ENST00000493727 DNAH11Q96DT5 4516 aa8.72□□□□□ -1.01
UPF3A-210ENST00000493727 IGKV3D-20A0A0C4DH25 116 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 GRIFINA4D1Z8 144 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 TYMSP04818 313 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 S100A1P23297 94 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 ZNF705AQ6ZN79 300 aaPredicted RBP8.71□□□□□ -1.02
UPF3A-210ENST00000493727 OR11H2Q8NH07 326 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 PHLDA1Q8WV24 401 aaPredicted RBP8.71□□□□□ -1.02
UPF3A-210ENST00000493727 TPPP3Q9BW30 176 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 TIMM8BQ9Y5J9 83 aaPredicted RBP8.71□□□□□ -1.02
UPF3A-210ENST00000493727 DNAH17Q9UFH2 4485 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 C7orf77A4D0Y5 90 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 SMIM9A6NGZ8 99 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 A8MWL6 223 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 GNRH2O43555 120 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 GZMBP10144 247 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 ZNF415Q09FC8 603 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 TDRG1Q3Y452 100 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 LINC00467Q9BRT7 94 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 CTDSP1Q9GZU7 261 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 TP53TG3Q9ULZ0 132 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 V9GYV3 84 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 H3BVH4 76 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 TCL1AP56279 114 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 TCTAP57738 103 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 LGALS9CQ6DKI2 356 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 C11orf45Q8TAV5 145 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 TMEM263Q8WUH6 116 aaKnown RBP8.69□□□□□ -1.02
UPF3A-210ENST00000493727 C16orf74Q96GX8 76 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 NEU1Q99519 415 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 FAM30AQ9NZY2 134 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 ABCA13Q86UQ4 5058 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 SNURFLB1AK76 121 aa8.68□□□□□ -1.02
UPF3A-210ENST00000493727 PRM2P04554 102 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms