RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 IGHV1OR15-1A0A075B7D0 117 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 TRAV21A0A0B4J279 112 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 A0A1B0GVY2 172 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 TEX46H3BTG2 121 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 PFN1P07737 140 aaKnown RBP4.75□□□□□ -1.65
VPS52-219ENST00000493379 ATP5G3P48201 142 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 ZNF80P51504 273 aaPredicted RBP4.75□□□□□ -1.65
VPS52-219ENST00000493379 TCL1AP56279 114 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 NANOS2P60321 138 aaKnown RBP4.75□□□□□ -1.65
VPS52-219ENST00000493379 UBE2G2P60604 165 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 ZNF674Q2M3X9 581 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 LGALS9BQ3B8N2 356 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 DNLZQ5SXM8 178 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 ZNF680Q8NEM1 530 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 RASL10AQ92737 203 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 FMC1Q96HJ9 113 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 TMEM208Q9BTX3 173 aa4.75□□□□□ -1.65
VPS52-219ENST00000493379 FLG2Q5D862 2391 aaPredicted RBP4.74□□□□□ -1.65
VPS52-219ENST00000493379 TRAV10A0A0B4J240 114 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 FABP5P3A8MUU1 101 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 SPINK4O60575 86 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 IFNA7P01567 189 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 CRIP1P50238 77 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 SMUG1Q53HV7 270 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 PIK3CD-AS1Q5SR53 167 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 TEX261Q6UWH6 196 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 ALKAL2Q6UX46 152 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 Q6ZTC4 211 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 TMEM183AQ8IXX5 376 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 SMIM12Q96EX1 92 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 KCNS1Q96KK3 526 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 SPXQ9BT56 116 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 NDFIP1Q9BT67 221 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 NDUFAF3Q9BU61 184 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 C11orf21Q9P2W6 132 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 DNAH6Q9C0G6 4158 aa4.74□□□□□ -1.65
VPS52-219ENST00000493379 TRAV34A0A0B4J273 112 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 IGHV3-16A0A0C4DH30 117 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 USP17L23D6RBM5 183 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 H3BNG1 76 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 RHODO00212 210 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 PDE6DO43924 150 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 BCL2P10415 239 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 MEF2BQ02080 365 aaPredicted RBP4.73□□□□□ -1.65
VPS52-219ENST00000493379 CST9LP1Q5W188 147 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 FAM159AQ6UWV7 190 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 Q86TA4 180 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 IQCF2Q8IXL9 164 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 SGK494Q96LW2 274 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 MDFICQ9P1T7 246 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 VAX2Q9UIW0 290 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 APLNQ9ULZ1 77 aa4.73□□□□□ -1.65
VPS52-219ENST00000493379 KLK5Q9Y337 293 aaPredicted RBP4.73□□□□□ -1.65
VPS52-219ENST00000493379 DEFB131BA0A096LNP1 70 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 IGKV3D-20A0A0C4DH25 116 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 TMEM250H0YL14 139 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 GNRH2O43555 120 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 GCGP01275 180 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 IGLV2-8P01709 118 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 CXCL1P09341 107 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 DAD1P61803 113 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 ZNF506Q5JVG8 444 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 PRNTQ86SH4 94 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 C9orf85Q96MD7 179 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 NOP10Q9NPE3 64 aaKnown RBP4.72□□□□□ -1.65
VPS52-219ENST00000493379 GSN-AS1Q9NRJ2 163 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 GNG13Q9P2W3 67 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 RPH3ALQ9UNE2 315 aa4.72□□□□□ -1.65
VPS52-219ENST00000493379 TRBV20OR9-2A0A075B6H5 130 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 RBFOX3A6NFN3 312 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 KRTAP9-7A8MTY7 169 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 SNURFLB1AK76 121 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 KRBOX1C9JBD0 128 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 CIDEAO60543 219 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 IFNA1P01562 189 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 TYMSP04818 313 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 RNASE3P12724 160 aaKnown RBP4.71□□□□□ -1.66
VPS52-219ENST00000493379 HTN1P15515 57 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 AKR1C3P42330 323 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 RPL35P42766 123 aaKnown RBP4.71□□□□□ -1.66
VPS52-219ENST00000493379 EMP1P54849 157 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 UBE2G1P62253 170 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 LGALS9CQ6DKI2 356 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 BAGE2Q86Y30 109 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 ZC2HC1AQ96GY0 325 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 FAM210AQ96ND0 272 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 SMDT1Q9H4I9 107 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 SCRT2Q9NQ03 307 aa4.71□□□□□ -1.66
VPS52-219ENST00000493379 IGHV4-4A0A075B6R2 117 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 A0A1B0GV50 99 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 C19orf71A6NCJ1 209 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 C9JCJ5 164 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 M0R2P5 195 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 ATP5G1P05496 136 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 ZNF415Q09FC8 603 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 MUC21Q5SSG8 566 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 FAM162BQ5T6X4 162 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 Q6ZTI0 123 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 POM121L12Q8N7R1 296 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms