RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 RNASE3P12724 160 aaKnown RBP10.42□□□□□ -0.74
PTPN7-216ENST00000492977 EVI2AP22794 236 aa10.42□□□□□ -0.74
PTPN7-216ENST00000492977 FA2HQ7L5A8 372 aa10.42□□□□□ -0.74
PTPN7-216ENST00000492977 PHLDA3Q9Y5J5 127 aa10.42□□□□□ -0.74
PTPN7-216ENST00000492977 H3BMM0 161 aa10.41□□□□□ -0.74
PTPN7-216ENST00000492977 KRTDAPP60985 99 aa10.41□□□□□ -0.74
PTPN7-216ENST00000492977 AP5S1Q9NUS5 200 aa10.41□□□□□ -0.74
PTPN7-216ENST00000492977 ZNF256Q9Y2P7 627 aaPredicted RBP10.41□□□□□ -0.74
PTPN7-216ENST00000492977 TIMM8BQ9Y5J9 83 aaPredicted RBP10.41□□□□□ -0.74
PTPN7-216ENST00000492977 NOTCH2Q04721 2471 aa10.4□□□□□ -0.74
PTPN7-216ENST00000492977 IGHV1-24A0A0C4DH33 117 aa10.4□□□□□ -0.74
PTPN7-216ENST00000492977 KNCNA6PVL3 124 aa10.4□□□□□ -0.74
PTPN7-216ENST00000492977 SPINK13Q1W4C9 94 aa10.4□□□□□ -0.74
PTPN7-216ENST00000492977 MAP6D1Q9H9H5 199 aa10.4□□□□□ -0.74
PTPN7-216ENST00000492977 SORL1Q92673 2214 aa10.4□□□□□ -0.74
PTPN7-216ENST00000492977 AGRNO00468 2067 aa10.4□□□□□ -0.75
PTPN7-216ENST00000492977 TRAV12-2A0A075B6T6 113 aa10.39□□□□□ -0.75
PTPN7-216ENST00000492977 SMKR1H3BMG3 65 aa10.39□□□□□ -0.75
PTPN7-216ENST00000492977 NXPH4O95158 308 aa10.39□□□□□ -0.75
PTPN7-216ENST00000492977 NPYP01303 97 aa10.39□□□□□ -0.75
PTPN7-216ENST00000492977 C3orf79P0CE67 100 aa10.39□□□□□ -0.75
PTPN7-216ENST00000492977 IFI27P40305 119 aaPredicted RBP10.39□□□□□ -0.75
PTPN7-216ENST00000492977 PKIAP61925 76 aa10.39□□□□□ -0.75
PTPN7-216ENST00000492977 M0R381 172 aa10.39□□□□□ -0.75
PTPN7-216ENST00000492977 NCR2O95944 276 aa10.39□□□□□ -0.75
PTPN7-216ENST00000492977 CD7P09564 240 aa10.39□□□□□ -0.75
PTPN7-216ENST00000492977 CLUHP3Q96NS8 147 aa10.39□□□□□ -0.75
PTPN7-216ENST00000492977 MAP1LC3AQ9H492 121 aa10.39□□□□□ -0.75
PTPN7-216ENST00000492977 IGHV1OR15-1A0A075B7D0 117 aa10.38□□□□□ -0.75
PTPN7-216ENST00000492977 LOC389332A0A1B0GUA5 103 aa10.38□□□□□ -0.75
PTPN7-216ENST00000492977 LEPROTL1O95214 131 aa10.38□□□□□ -0.75
PTPN7-216ENST00000492977 TNFRSF6BO95407 300 aa10.38□□□□□ -0.75
PTPN7-216ENST00000492977 PMCHL1Q16048 86 aa10.38□□□□□ -0.75
PTPN7-216ENST00000492977 TEX43Q6ZNM6 134 aa10.38□□□□□ -0.75
PTPN7-216ENST00000492977 NDUFA11Q86Y39 141 aa10.38□□□□□ -0.75
PTPN7-216ENST00000492977 MRAP2Q96G30 205 aa10.38□□□□□ -0.75
PTPN7-216ENST00000492977 DPH3P1Q9H4G8 78 aa10.38□□□□□ -0.75
PTPN7-216ENST00000492977 IGHV3-16A0A0C4DH30 117 aa10.37□□□□□ -0.75
PTPN7-216ENST00000492977 TSTD3H0UI37 97 aa10.37□□□□□ -0.75
PTPN7-216ENST00000492977 CRLF1O75462 422 aa10.37□□□□□ -0.75
PTPN7-216ENST00000492977 BTF3P20290 206 aaKnown RBP10.37□□□□□ -0.75
PTPN7-216ENST00000492977 CMC4P56277 68 aaPredicted RBP10.37□□□□□ -0.75
PTPN7-216ENST00000492977 NSUN5P1Q3KNT7 163 aa10.37□□□□□ -0.75
PTPN7-216ENST00000492977 ZNF664Q8N3J9 261 aa10.37□□□□□ -0.75
PTPN7-216ENST00000492977 Q8N976 141 aa10.37□□□□□ -0.75
PTPN7-216ENST00000492977 HSPB8Q9UJY1 196 aa10.37□□□□□ -0.75
PTPN7-216ENST00000492977 LINC01546A6NGU7 62 aa10.36□□□□□ -0.75
PTPN7-216ENST00000492977 PRSS47A8MTI9 375 aa10.36□□□□□ -0.75
PTPN7-216ENST00000492977 DEFB125Q8N687 156 aa10.36□□□□□ -0.75
PTPN7-216ENST00000492977 OR2K2Q8NGT1 345 aa10.36□□□□□ -0.75
PTPN7-216ENST00000492977 C9orf85Q96MD7 179 aa10.36□□□□□ -0.75
PTPN7-216ENST00000492977 AP1S3Q96PC3 154 aa10.36□□□□□ -0.75
PTPN7-216ENST00000492977 NXT2Q9NPJ8 142 aaKnown RBP10.36□□□□□ -0.75
PTPN7-216ENST00000492977 NF1P21359 2839 aa10.36□□□□□ -0.75
PTPN7-216ENST00000492977 CRXO43186 299 aaPredicted RBP10.35□□□□□ -0.75
PTPN7-216ENST00000492977 GAS8-AS1O95177 125 aa10.35□□□□□ -0.75
PTPN7-216ENST00000492977 C21orf62-AS1Q17RA5 79 aa10.35□□□□□ -0.75
PTPN7-216ENST00000492977 Q8N1Y9 231 aa10.35□□□□□ -0.75
PTPN7-216ENST00000492977 TMEM70Q9BUB7 260 aa10.35□□□□□ -0.75
PTPN7-216ENST00000492977 OTOGQ6ZRI0 2925 aa10.35□□□□□ -0.75
PTPN7-216ENST00000492977 CUBNO60494 3623 aa10.35□□□□□ -0.75
PTPN7-216ENST00000492977 TRGV11A0A075B6L2 103 aa10.35□□□□□ -0.75
PTPN7-216ENST00000492977 RBMY1BA6NDE4 496 aaKnown RBP10.35□□□□□ -0.75
PTPN7-216ENST00000492977 RBMY1EA6NEQ0 496 aaKnown RBP10.35□□□□□ -0.75
PTPN7-216ENST00000492977 SPRY2O43597 315 aa10.35□□□□□ -0.75
PTPN7-216ENST00000492977 SAP30O75446 220 aa10.35□□□□□ -0.75
PTPN7-216ENST00000492977 RBMY1DP0C7P1 496 aaKnown RBP10.35□□□□□ -0.75
PTPN7-216ENST00000492977 KRTAP10-3P60369 221 aa10.35□□□□□ -0.75
PTPN7-216ENST00000492977 ZNF124Q15973 351 aa10.35□□□□□ -0.75
PTPN7-216ENST00000492977 ODF3L2Q3SX64 289 aa10.35□□□□□ -0.75
PTPN7-216ENST00000492977 NRACQ8N912 160 aa10.35□□□□□ -0.75
PTPN7-216ENST00000492977 MUC4Q99102 2169 aa10.34□□□□□ -0.75
PTPN7-216ENST00000492977 OR11H12B2RN74 326 aa10.34□□□□□ -0.75
PTPN7-216ENST00000492977 IGLV1-51P01701 117 aa10.34□□□□□ -0.75
PTPN7-216ENST00000492977 GATA1P15976 413 aaPredicted RBP10.34□□□□□ -0.75
PTPN7-216ENST00000492977 FXYD7P58549 80 aa10.34□□□□□ -0.75
PTPN7-216ENST00000492977 C14orf178Q8N769 122 aaPredicted RBP10.34□□□□□ -0.75
PTPN7-216ENST00000492977 POM121L12Q8N7R1 296 aa10.34□□□□□ -0.75
PTPN7-216ENST00000492977 LINC00469Q8N7U9 141 aa10.34□□□□□ -0.75
PTPN7-216ENST00000492977 SYT8Q8NBV8 401 aa10.34□□□□□ -0.75
PTPN7-216ENST00000492977 C20orf144Q9BQM9 153 aa10.34□□□□□ -0.75
PTPN7-216ENST00000492977 PRO1933Q9H354 126 aa10.34□□□□□ -0.75
PTPN7-216ENST00000492977 MDFICQ9P1T7 246 aa10.34□□□□□ -0.75
PTPN7-216ENST00000492977 WNK1Q9H4A3 2382 aa10.33□□□□□ -0.76
PTPN7-216ENST00000492977 LINC00587B1AMM8 73 aa10.33□□□□□ -0.76
PTPN7-216ENST00000492977 PPP1R17O96001 155 aa10.33□□□□□ -0.76
PTPN7-216ENST00000492977 SMIM17P0DL12 118 aa10.33□□□□□ -0.76
PTPN7-216ENST00000492977 Q8N8P6 123 aa10.33□□□□□ -0.76
PTPN7-216ENST00000492977 FAM110AQ9BQ89 295 aa10.33□□□□□ -0.76
PTPN7-216ENST00000492977 MAP1LC3CQ9BXW4 147 aa10.33□□□□□ -0.76
PTPN7-216ENST00000492977 TRAV26-2A0A0B4J265 109 aa10.32□□□□□ -0.76
PTPN7-216ENST00000492977 SYS1-DBNDD2H3BUS1 97 aa10.32□□□□□ -0.76
PTPN7-216ENST00000492977 LINC00173Q6ZV60 143 aa10.32□□□□□ -0.76
PTPN7-216ENST00000492977 STHQ8IWL8 128 aa10.32□□□□□ -0.76
PTPN7-216ENST00000492977 LINC00467Q9BRT7 94 aa10.32□□□□□ -0.76
PTPN7-216ENST00000492977 VAMP8Q9BV40 100 aa10.32□□□□□ -0.76
PTPN7-216ENST00000492977 KIF25-AS1Q9Y6Z4 181 aa10.32□□□□□ -0.76
PTPN7-216ENST00000492977 IGLV2-18A0A075B6J9 118 aa10.31□□□□□ -0.76
PTPN7-216ENST00000492977 A0A096LNJ9 63 aa10.31□□□□□ -0.76
PTPN7-216ENST00000492977 CBY3A6NI87 242 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms