RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 FAT2Q9NYQ8 4349 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 A0A0J9YWU9 116 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 PRSS46E5RG02 174 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 SPINK4O60575 86 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 APELAP0DMC3 54 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 ERVK-16P61578 105 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 PRR20EP86478 221 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 PRR20CP86479 221 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 PRR20DP86480 221 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 PRR20BP86481 221 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 PRR20AP86496 221 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 MIC13Q5XKP0 118 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 WFDC3Q8IUB2 231 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 GATD1Q8NB37 220 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 DYNLRB2Q8TF09 96 aa9.76□□□□□ -0.85
HDAC3-213ENST00000492506 SRRM4A7MD48 611 aaKnown RBP9.75□□□□□ -0.85
HDAC3-213ENST00000492506 G6PCP35575 357 aa9.75□□□□□ -0.85
HDAC3-213ENST00000492506 GCSAMLQ5JQS6 135 aa9.75□□□□□ -0.85
HDAC3-213ENST00000492506 GTSF1Q8WW33 167 aa9.75□□□□□ -0.85
HDAC3-213ENST00000492506 URB1-AS1Q96HZ7 61 aa9.75□□□□□ -0.85
HDAC3-213ENST00000492506 SELENOKQ9Y6D0 94 aa9.75□□□□□ -0.85
HDAC3-213ENST00000492506 DNAH2Q9P225 4427 aa9.75□□□□□ -0.85
HDAC3-213ENST00000492506 DNAH17Q9UFH2 4485 aa9.74□□□□□ -0.85
HDAC3-213ENST00000492506 FAM223BA6NKX1 122 aa9.74□□□□□ -0.85
HDAC3-213ENST00000492506 C8orf88P0DMB2 117 aa9.74□□□□□ -0.85
HDAC3-213ENST00000492506 FAM223AQ8IWN6 122 aa9.74□□□□□ -0.85
HDAC3-213ENST00000492506 TMEM61Q8N0U2 210 aa9.74□□□□□ -0.85
HDAC3-213ENST00000492506 AP5S1Q9NUS5 200 aa9.74□□□□□ -0.85
HDAC3-213ENST00000492506 ABCA13Q86UQ4 5058 aa9.74□□□□□ -0.85
HDAC3-213ENST00000492506 HIGD1CA8MV81 97 aa9.73□□□□□ -0.85
HDAC3-213ENST00000492506 E9PLD3 99 aa9.73□□□□□ -0.85
HDAC3-213ENST00000492506 LGALS9O00182 355 aa9.73□□□□□ -0.85
HDAC3-213ENST00000492506 CHEK1O14757 476 aa9.73□□□□□ -0.85
HDAC3-213ENST00000492506 CA1P00915 261 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-213ENST00000492506 DUTP33316 252 aaKnown RBP9.73□□□□□ -0.85
HDAC3-213ENST00000492506 TMEM177Q53S58 311 aa9.73□□□□□ -0.85
HDAC3-213ENST00000492506 LYRM7Q5U5X0 104 aa9.73□□□□□ -0.85
HDAC3-213ENST00000492506 RBPMS2Q6ZRY4 209 aaKnown RBP9.73□□□□□ -0.85
HDAC3-213ENST00000492506 CACNG8Q8WXS5 425 aa9.73□□□□□ -0.85
HDAC3-213ENST00000492506 HARBI1Q96MB7 349 aa9.73□□□□□ -0.85
HDAC3-213ENST00000492506 RPP21Q9H633 154 aaKnown RBP9.73□□□□□ -0.85
HDAC3-213ENST00000492506 ENY2Q9NPA8 101 aa9.73□□□□□ -0.85
HDAC3-213ENST00000492506 TP53TG1Q9Y2A0 90 aa9.73□□□□□ -0.85
HDAC3-213ENST00000492506 KLK5Q9Y337 293 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-213ENST00000492506 MUC4Q99102 2169 aa9.73□□□□□ -0.85
HDAC3-213ENST00000492506 TMEM262E9PQX1 116 aa9.72□□□□□ -0.85
HDAC3-213ENST00000492506 ATP5G2Q06055 141 aa9.72□□□□□ -0.85
HDAC3-213ENST00000492506 GDF5OSQ5U4N7 250 aa9.72□□□□□ -0.85
HDAC3-213ENST00000492506 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-213ENST00000492506 SRSF12Q8WXF0 261 aaKnown RBP9.72□□□□□ -0.85
HDAC3-213ENST00000492506 TMEM213A2RRL7 107 aa9.71□□□□□ -0.86
HDAC3-213ENST00000492506 PEX7O00628 323 aa9.71□□□□□ -0.86
HDAC3-213ENST00000492506 ARL3P36405 182 aa9.71□□□□□ -0.86
HDAC3-213ENST00000492506 GAGE13Q4V321 117 aa9.71□□□□□ -0.86
HDAC3-213ENST00000492506 Q6AWC8 147 aa9.71□□□□□ -0.86
HDAC3-213ENST00000492506 GPHB5Q86YW7 130 aa9.71□□□□□ -0.86
HDAC3-213ENST00000492506 GGTLC3B5MD39 225 aa9.7□□□□□ -0.86
HDAC3-213ENST00000492506 H3BMG7 143 aa9.7□□□□□ -0.86
HDAC3-213ENST00000492506 J3KRW8 73 aa9.7□□□□□ -0.86
HDAC3-213ENST00000492506 SPRY2O43597 315 aa9.7□□□□□ -0.86
HDAC3-213ENST00000492506 RIGQ13278 110 aa9.7□□□□□ -0.86
HDAC3-213ENST00000492506 C15orf32Q32M92 178 aa9.7□□□□□ -0.86
HDAC3-213ENST00000492506 OR1L4Q8NGR5 311 aa9.7□□□□□ -0.86
HDAC3-213ENST00000492506 SPAG8Q99932 426 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-213ENST00000492506 TM2D2Q9BX73 214 aa9.7□□□□□ -0.86
HDAC3-213ENST00000492506 PSG8Q9UQ74 426 aa9.7□□□□□ -0.86
HDAC3-213ENST00000492506 SPINK8P0C7L1 97 aa9.69□□□□□ -0.86
HDAC3-213ENST00000492506 DEFA4P12838 97 aa9.69□□□□□ -0.86
HDAC3-213ENST00000492506 CAMPP49913 170 aa9.69□□□□□ -0.86
HDAC3-213ENST00000492506 PKD1P98161 4303 aa9.69□□□□□ -0.86
HDAC3-213ENST00000492506 DEFB135Q30KP9 77 aa9.69□□□□□ -0.86
HDAC3-213ENST00000492506 TM4SF20Q53R12 229 aa9.69□□□□□ -0.86
HDAC3-213ENST00000492506 MIR17HGQ75NE6 70 aa9.69□□□□□ -0.86
HDAC3-213ENST00000492506 PHLDA1Q8WV24 401 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-213ENST00000492506 ANAPC13Q9BS18 74 aa9.69□□□□□ -0.86
HDAC3-213ENST00000492506 SLC25A2Q9BXI2 301 aa9.69□□□□□ -0.86
HDAC3-213ENST00000492506 C1QTNF4Q9BXJ3 329 aa9.69□□□□□ -0.86
HDAC3-213ENST00000492506 DYNC1H1Q14204 4646 aaKnown RBP9.68□□□□□ -0.86
HDAC3-213ENST00000492506 TRBV7-9A0A0J9YWB2 115 aa9.68□□□□□ -0.86
HDAC3-213ENST00000492506 FBLL1A6NHQ2 334 aaKnown RBP9.68□□□□□ -0.86
HDAC3-213ENST00000492506 CLEC3BP05452 202 aa9.68□□□□□ -0.86
HDAC3-213ENST00000492506 RPL30P62888 115 aaKnown RBP9.68□□□□□ -0.86
HDAC3-213ENST00000492506 C10orf55Q5SWW7 151 aa9.68□□□□□ -0.86
HDAC3-213ENST00000492506 SPATA31B1PQ5VZV4 182 aa9.68□□□□□ -0.86
HDAC3-213ENST00000492506 RNF183Q96D59 192 aa9.68□□□□□ -0.86
HDAC3-213ENST00000492506 DAZAP1Q96EP5 407 aaKnown RBP9.68□□□□□ -0.86
HDAC3-213ENST00000492506 FMC1Q96HJ9 113 aa9.68□□□□□ -0.86
HDAC3-213ENST00000492506 CCDC140Q96MF4 163 aa9.68□□□□□ -0.86
HDAC3-213ENST00000492506 KLF12Q9Y4X4 402 aa9.68□□□□□ -0.86
HDAC3-213ENST00000492506 TRBV6-1A0A0K0K1D8 114 aa9.67□□□□□ -0.86
HDAC3-213ENST00000492506 P01737 135 aa9.67□□□□□ -0.86
HDAC3-213ENST00000492506 FCGR2BP31994 310 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-213ENST00000492506 FOXA3P55318 350 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-213ENST00000492506 UBE2L3P68036 154 aaKnown RBP9.67□□□□□ -0.86
HDAC3-213ENST00000492506 VMA21Q3ZAQ7 101 aa9.67□□□□□ -0.86
HDAC3-213ENST00000492506 RAB37Q96AX2 223 aa9.67□□□□□ -0.86
HDAC3-213ENST00000492506 SPANXDQ9BXN6 97 aa9.67□□□□□ -0.86
HDAC3-213ENST00000492506 LINC00473A8K010 186 aa9.66□□□□□ -0.86
HDAC3-213ENST00000492506 TEX22C9J3V5 150 aa9.66□□□□□ -0.86
HDAC3-213ENST00000492506 APOMO95445 188 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms