RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 RNF212Q495C1 297 aa10.24□□□□□ -0.77
SS18L1-205ENST00000492466 ZNF876PQ49A33 203 aa10.24□□□□□ -0.77
SS18L1-205ENST00000492466 BAGE2Q86Y30 109 aa10.24□□□□□ -0.77
SS18L1-205ENST00000492466 DNAH5Q8TE73 4624 aa10.23□□□□□ -0.77
SS18L1-205ENST00000492466 TRAV4A0A0B4J268 109 aa10.23□□□□□ -0.77
SS18L1-205ENST00000492466 H3BVH4 76 aa10.23□□□□□ -0.77
SS18L1-205ENST00000492466 PDE6DO43924 150 aa10.23□□□□□ -0.77
SS18L1-205ENST00000492466 TAGLN2P37802 199 aaKnown RBP10.23□□□□□ -0.77
SS18L1-205ENST00000492466 RPL35P42766 123 aaKnown RBP10.23□□□□□ -0.77
SS18L1-205ENST00000492466 SLAQ13239 276 aa10.23□□□□□ -0.77
SS18L1-205ENST00000492466 PRO0255Q9UI72 69 aa10.23□□□□□ -0.77
SS18L1-205ENST00000492466 BOLA1Q9Y3E2 137 aa10.23□□□□□ -0.77
SS18L1-205ENST00000492466 ICOSQ9Y6W8 199 aa10.23□□□□□ -0.77
SS18L1-205ENST00000492466 APOBP04114 4563 aaKnown RBP10.23□□□□□ -0.77
SS18L1-205ENST00000492466 MGST1P10620 155 aaKnown RBP10.22□□□□□ -0.77
SS18L1-205ENST00000492466 RASL10AQ92737 203 aa10.22□□□□□ -0.77
SS18L1-205ENST00000492466 ZNF479Q96JC4 524 aa10.22□□□□□ -0.77
SS18L1-205ENST00000492466 VAX2Q9UIW0 290 aa10.22□□□□□ -0.77
SS18L1-205ENST00000492466 GRIFINA4D1Z8 144 aa10.21□□□□□ -0.77
SS18L1-205ENST00000492466 H3BNG1 76 aa10.21□□□□□ -0.77
SS18L1-205ENST00000492466 GNG4P50150 75 aa10.21□□□□□ -0.77
SS18L1-205ENST00000492466 CENPWQ5EE01 88 aa10.21□□□□□ -0.77
SS18L1-205ENST00000492466 SYT8Q8NBV8 401 aa10.21□□□□□ -0.77
SS18L1-205ENST00000492466 C11orf52Q96A22 123 aa10.21□□□□□ -0.77
SS18L1-205ENST00000492466 C9orf85Q96MD7 179 aa10.21□□□□□ -0.77
SS18L1-205ENST00000492466 DERL1Q9BUN8 251 aa10.21□□□□□ -0.77
SS18L1-205ENST00000492466 MED9Q9NWA0 146 aa10.21□□□□□ -0.77
SS18L1-205ENST00000492466 HHLA3Q9XRX5 114 aa10.21□□□□□ -0.77
SS18L1-205ENST00000492466 IGKV3D-20A0A0C4DH25 116 aa10.2□□□□□ -0.78
SS18L1-205ENST00000492466 ZNF674Q2M3X9 581 aa10.2□□□□□ -0.78
SS18L1-205ENST00000492466 ZNF506Q5JVG8 444 aa10.2□□□□□ -0.78
SS18L1-205ENST00000492466 KRBOX1C9JBD0 128 aa10.19□□□□□ -0.78
SS18L1-205ENST00000492466 RNASE3P12724 160 aaKnown RBP10.19□□□□□ -0.78
SS18L1-205ENST00000492466 CEBPGP53567 150 aa10.19□□□□□ -0.78
SS18L1-205ENST00000492466 CRYBA4P53673 196 aa10.19□□□□□ -0.78
SS18L1-205ENST00000492466 FAM3BP58499 235 aaPredicted RBP10.19□□□□□ -0.78
SS18L1-205ENST00000492466 FHL2Q14192 279 aa10.19□□□□□ -0.78
SS18L1-205ENST00000492466 LINC01559Q495D7 138 aa10.19□□□□□ -0.78
SS18L1-205ENST00000492466 COX8CQ7Z4L0 72 aa10.19□□□□□ -0.78
SS18L1-205ENST00000492466 DAZAP1Q96EP5 407 aaKnown RBP10.19□□□□□ -0.78
SS18L1-205ENST00000492466 PHLDA3Q9Y5J5 127 aa10.19□□□□□ -0.78
SS18L1-205ENST00000492466 A0A096LPF7 62 aa10.18□□□□□ -0.78
SS18L1-205ENST00000492466 IGHV3-73A0A0B4J1V6 119 aa10.18□□□□□ -0.78
SS18L1-205ENST00000492466 PGPEP1LA6NFU8 196 aa10.18□□□□□ -0.78
SS18L1-205ENST00000492466 SRIP30626 198 aa10.18□□□□□ -0.78
SS18L1-205ENST00000492466 CRIP1P50238 77 aa10.18□□□□□ -0.78
SS18L1-205ENST00000492466 MRPL23Q16540 153 aaKnown RBP10.18□□□□□ -0.78
SS18L1-205ENST00000492466 ZNF575Q86XF7 245 aa10.18□□□□□ -0.78
SS18L1-205ENST00000492466 VSIG2Q96IQ7 327 aa10.18□□□□□ -0.78
SS18L1-205ENST00000492466 KRTAP4-5Q9BYR2 181 aa10.18□□□□□ -0.78
SS18L1-205ENST00000492466 IL36BQ9NZH7 164 aa10.18□□□□□ -0.78
SS18L1-205ENST00000492466 M0R381 172 aa10.17□□□□□ -0.78
SS18L1-205ENST00000492466 ARMS2P0C7Q2 107 aa10.17□□□□□ -0.78
SS18L1-205ENST00000492466 GYPEP15421 78 aa10.17□□□□□ -0.78
SS18L1-205ENST00000492466 RPL19P84098 196 aaKnown RBP10.17□□□□□ -0.78
SS18L1-205ENST00000492466 TOR2AQ5JU69 321 aa10.17□□□□□ -0.78
SS18L1-205ENST00000492466 C1orf134Q5TEV5 83 aa10.17□□□□□ -0.78
SS18L1-205ENST00000492466 EIF5A2Q9GZV4 153 aaKnown RBP10.17□□□□□ -0.78
SS18L1-205ENST00000492466 LINC00588Q9Y4M8 146 aa10.17□□□□□ -0.78
SS18L1-205ENST00000492466 RAB19A4D1S5 217 aa10.16□□□□□ -0.78
SS18L1-205ENST00000492466 RBFOX3A6NFN3 312 aa10.16□□□□□ -0.78
SS18L1-205ENST00000492466 A8MWV9 139 aa10.16□□□□□ -0.78
SS18L1-205ENST00000492466 CFAP126Q5VTH2 177 aa10.16□□□□□ -0.78
SS18L1-205ENST00000492466 ZFP82Q8N141 532 aa10.16□□□□□ -0.78
SS18L1-205ENST00000492466 ZNRF2Q8NHG8 242 aa10.16□□□□□ -0.78
SS18L1-205ENST00000492466 PRADC1Q9BSG0 188 aa10.16□□□□□ -0.78
SS18L1-205ENST00000492466 BIN3Q9NQY0 253 aa10.16□□□□□ -0.78
SS18L1-205ENST00000492466 RS1O15537 224 aa10.15□□□□□ -0.78
SS18L1-205ENST00000492466 CIDEAO60543 219 aa10.15□□□□□ -0.78
SS18L1-205ENST00000492466 FAM74A4Q5TZK3 123 aa10.15□□□□□ -0.78
SS18L1-205ENST00000492466 NEGR1Q7Z3B1 354 aa10.15□□□□□ -0.78
SS18L1-205ENST00000492466 MLST8Q9BVC4 326 aa10.15□□□□□ -0.78
SS18L1-205ENST00000492466 GATA1P15976 413 aaPredicted RBP10.14□□□□□ -0.79
SS18L1-205ENST00000492466 TNP2Q05952 138 aa10.14□□□□□ -0.79
SS18L1-205ENST00000492466 RHOHQ15669 191 aa10.14□□□□□ -0.79
SS18L1-205ENST00000492466 SOHLH1Q5JUK2 328 aa10.14□□□□□ -0.79
SS18L1-205ENST00000492466 PTH2Q96A98 100 aa10.14□□□□□ -0.79
SS18L1-205ENST00000492466 SMIM12Q96EX1 92 aa10.14□□□□□ -0.79
SS18L1-205ENST00000492466 TPPP3Q9BW30 176 aa10.14□□□□□ -0.79
SS18L1-205ENST00000492466 MRPS16Q9Y3D3 137 aaKnown RBP10.14□□□□□ -0.79
SS18L1-205ENST00000492466 NBDYA0A0U1RRE5 68 aa10.13□□□□□ -0.79
SS18L1-205ENST00000492466 XKRY2A2RUG3 117 aa10.13□□□□□ -0.79
SS18L1-205ENST00000492466 K7EQD1 137 aa10.13□□□□□ -0.79
SS18L1-205ENST00000492466 RHODO00212 210 aa10.13□□□□□ -0.79
SS18L1-205ENST00000492466 P01737 135 aa10.13□□□□□ -0.79
SS18L1-205ENST00000492466 ESRGQ1W209 222 aa10.13□□□□□ -0.79
SS18L1-205ENST00000492466 TTC32Q5I0X7 151 aa10.13□□□□□ -0.79
SS18L1-205ENST00000492466 DNLZQ5SXM8 178 aa10.13□□□□□ -0.79
SS18L1-205ENST00000492466 SPANXN1Q5VSR9 72 aa10.13□□□□□ -0.79
SS18L1-205ENST00000492466 OR2D3Q8NGH3 330 aa10.13□□□□□ -0.79
SS18L1-205ENST00000492466 PARLQ9H300 379 aa10.13□□□□□ -0.79
SS18L1-205ENST00000492466 LOC100131303A0A0U1RQF7 123 aa10.12□□□□□ -0.79
SS18L1-205ENST00000492466 TMEM250H0YL14 139 aa10.12□□□□□ -0.79
SS18L1-205ENST00000492466 CXCL1P09341 107 aa10.12□□□□□ -0.79
SS18L1-205ENST00000492466 RPS20P60866 119 aaKnown RBP10.12□□□□□ -0.79
SS18L1-205ENST00000492466 SSTP61278 116 aa10.12□□□□□ -0.79
SS18L1-205ENST00000492466 PIK3CD-AS1Q5SR53 167 aa10.12□□□□□ -0.79
SS18L1-205ENST00000492466 SH2D6Q7Z4S9 175 aa10.12□□□□□ -0.79
SS18L1-205ENST00000492466 DMRTA1Q5VZB9 504 aa10.11□□□□□ -0.79
SS18L1-205ENST00000492466 SLC25A29Q8N8R3 303 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms