RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 IL17DQ8TAD2 202 aa6.41□□□□□ -1.38
HPS4-215ENST00000491142 CHCHD1Q96BP2 118 aaKnown RBP6.41□□□□□ -1.38
HPS4-215ENST00000491142 FAM110AQ9BQ89 295 aa6.41□□□□□ -1.38
HPS4-215ENST00000491142 NRN1Q9NPD7 142 aa6.41□□□□□ -1.38
HPS4-215ENST00000491142 LENEPQ9Y5L5 61 aa6.41□□□□□ -1.38
HPS4-215ENST00000491142 IGHV3-66A0A0C4DH42 116 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 SOCS3O14543 225 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 ZNF207O43670 478 aaKnown RBP6.4□□□□□ -1.38
HPS4-215ENST00000491142 HSBP1O75506 76 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 TRBV12-3P01733 135 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 LGALS1P09382 135 aaKnown RBP6.4□□□□□ -1.38
HPS4-215ENST00000491142 PMCHP20382 165 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 DDTP30046 118 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 ZNF138P52744 262 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 TMEM78Q5T7P6 136 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 LYZL1Q6UWQ5 148 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 UNQ9165/PRO28630Q6UXU0 137 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 RNF182Q8N6D2 247 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 Q8TAT8 98 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 LINC00476Q8WZB0 136 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 URB1-AS1Q96HZ7 61 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 CNFNQ9BYD5 112 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 AGPAT4-IT1Q9H0P7 198 aa6.4□□□□□ -1.38
HPS4-215ENST00000491142 IGHV7-4-1A0A0J9YVY3 117 aa6.39□□□□□ -1.39
HPS4-215ENST00000491142 LY6G6CO95867 125 aa6.39□□□□□ -1.39
HPS4-215ENST00000491142 IGHV3-11P01762 117 aa6.39□□□□□ -1.39
HPS4-215ENST00000491142 ZNF705DP0CH99 300 aaPredicted RBP6.39□□□□□ -1.39
HPS4-215ENST00000491142 ZNF705BP0CI00 300 aaPredicted RBP6.39□□□□□ -1.39
HPS4-215ENST00000491142 ERCC8Q13216 396 aa6.39□□□□□ -1.39
HPS4-215ENST00000491142 SAMD13Q5VXD3 122 aa6.39□□□□□ -1.39
HPS4-215ENST00000491142 ZNF575Q86XF7 245 aa6.39□□□□□ -1.39
HPS4-215ENST00000491142 GPHB5Q86YW7 130 aa6.39□□□□□ -1.39
HPS4-215ENST00000491142 Q8N976 141 aa6.39□□□□□ -1.39
HPS4-215ENST00000491142 FER1L6-AS1Q8NA97 138 aa6.39□□□□□ -1.39
HPS4-215ENST00000491142 C16orf92Q96LL3 132 aa6.39□□□□□ -1.39
HPS4-215ENST00000491142 PRO1933Q9H354 126 aa6.39□□□□□ -1.39
HPS4-215ENST00000491142 PEF1Q9UBV8 284 aaKnown RBP6.39□□□□□ -1.39
HPS4-215ENST00000491142 IGHV3OR16-13A0A075B7E8 117 aa6.38□□□□□ -1.39
HPS4-215ENST00000491142 IGHV3-49A0A0A0MS15 119 aa6.38□□□□□ -1.39
HPS4-215ENST00000491142 IGHV3-74A0A0B4J1X5 117 aa6.38□□□□□ -1.39
HPS4-215ENST00000491142 TRBV7-9A0A0J9YWB2 115 aa6.38□□□□□ -1.39
HPS4-215ENST00000491142 M0R2Z0 102 aa6.38□□□□□ -1.39
HPS4-215ENST00000491142 C3orf79P0CE67 100 aa6.38□□□□□ -1.39
HPS4-215ENST00000491142 PRB4P10163 310 aaPredicted RBP6.38□□□□□ -1.39
HPS4-215ENST00000491142 FAM104BQ5XKR9 115 aa6.38□□□□□ -1.39
HPS4-215ENST00000491142 RNASEKQ6P5S7 137 aaKnown RBP6.38□□□□□ -1.39
HPS4-215ENST00000491142 LINC00477Q96M19 166 aa6.38□□□□□ -1.39
HPS4-215ENST00000491142 C20orf144Q9BQM9 153 aa6.38□□□□□ -1.39
HPS4-215ENST00000491142 DAZ1Q9NQZ3 744 aaKnown RBP6.38□□□□□ -1.39
HPS4-215ENST00000491142 DNAH6Q9C0G6 4158 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 DYNC1H1Q14204 4646 aaKnown RBP6.37□□□□□ -1.39
HPS4-215ENST00000491142 OR5AL1P0C617 328 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 LINC00614P0C842 121 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 NTF3P20783 257 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 KRTDAPP60985 99 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 FAM106AQ4KMX7 169 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 FAM19A2Q8N3H0 131 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 C14orf144Q96I85 54 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 C20orf173Q96LM9 149 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 NDUFAF3Q9BU61 184 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 TMEM191AQ9H0A3 160 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 SMPXQ9UHP9 88 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 UFC1Q9Y3C8 167 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 ABCA13Q86UQ4 5058 aa6.37□□□□□ -1.39
HPS4-215ENST00000491142 TMSB15BA0A087X1C1 80 aa6.36□□□□□ -1.39
HPS4-215ENST00000491142 IGHV1-24A0A0C4DH33 117 aa6.36□□□□□ -1.39
HPS4-215ENST00000491142 TMEM213A2RRL7 107 aa6.36□□□□□ -1.39
HPS4-215ENST00000491142 C2orf70A6NJV1 201 aa6.36□□□□□ -1.39
HPS4-215ENST00000491142 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.36□□□□□ -1.39
HPS4-215ENST00000491142 ORM1P02763 201 aa6.36□□□□□ -1.39
HPS4-215ENST00000491142 PMCHL1Q16048 86 aa6.36□□□□□ -1.39
HPS4-215ENST00000491142 APRG1Q8IVJ8 170 aa6.36□□□□□ -1.39
HPS4-215ENST00000491142 ZNF738Q8NE65 137 aa6.36□□□□□ -1.39
HPS4-215ENST00000491142 FAM19A4Q96LR4 140 aa6.36□□□□□ -1.39
HPS4-215ENST00000491142 TPPP3Q9BW30 176 aa6.36□□□□□ -1.39
HPS4-215ENST00000491142 RHPN1-AS1Q9BWJ2 59 aa6.36□□□□□ -1.39
HPS4-215ENST00000491142 FAT2Q9NYQ8 4349 aa6.36□□□□□ -1.39
HPS4-215ENST00000491142 DNAH2Q9P225 4427 aa6.35□□□□□ -1.39
HPS4-215ENST00000491142 IGHV4-4A0A075B6R2 117 aa6.35□□□□□ -1.39
HPS4-215ENST00000491142 IGKV3D-20A0A0C4DH25 116 aa6.35□□□□□ -1.39
HPS4-215ENST00000491142 LGALS9O00182 355 aa6.35□□□□□ -1.39
HPS4-215ENST00000491142 CRXO43186 299 aaPredicted RBP6.35□□□□□ -1.39
HPS4-215ENST00000491142 SNAI2O43623 268 aa6.35□□□□□ -1.39
HPS4-215ENST00000491142 BTF3P20290 206 aaKnown RBP6.35□□□□□ -1.39
HPS4-215ENST00000491142 MRPL51Q4U2R6 128 aaKnown RBP6.35□□□□□ -1.39
HPS4-215ENST00000491142 LBHQ53QV2 105 aaPredicted RBP6.35□□□□□ -1.39
HPS4-215ENST00000491142 EBLN2Q6P2I7 272 aa6.35□□□□□ -1.39
HPS4-215ENST00000491142 MRPL52Q86TS9 123 aaKnown RBP6.35□□□□□ -1.39
HPS4-215ENST00000491142 GTSCR1Q86UQ5 136 aa6.35□□□□□ -1.39
HPS4-215ENST00000491142 ORMDL3Q8N138 153 aa6.35□□□□□ -1.39
HPS4-215ENST00000491142 OR10J6PQ8NGY7 276 aa6.35□□□□□ -1.39
HPS4-215ENST00000491142 CLUHP3Q96NS8 147 aa6.35□□□□□ -1.39
HPS4-215ENST00000491142 VAMP8Q9BV40 100 aa6.35□□□□□ -1.39
HPS4-215ENST00000491142 C11orf21Q9P2W6 132 aa6.35□□□□□ -1.39
HPS4-215ENST00000491142 LAMTOR2Q9Y2Q5 125 aa6.35□□□□□ -1.39
HPS4-215ENST00000491142 PKHD1P08F94 4074 aa6.34□□□□□ -1.39
HPS4-215ENST00000491142 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.39
HPS4-215ENST00000491142 C20orf202A1L168 122 aa6.34□□□□□ -1.39
HPS4-215ENST00000491142 PPBPP02775 128 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms