RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 BORCS7Q96B45 105 aa10.25□□□□□ -0.77
SMPD4-219ENST00000491128 IGHV3OR16-12A0A075B7B8 117 aa10.24□□□□□ -0.77
SMPD4-219ENST00000491128 SMKR1H3BMG3 65 aa10.24□□□□□ -0.77
SMPD4-219ENST00000491128 GAS8-AS1O95177 125 aa10.24□□□□□ -0.77
SMPD4-219ENST00000491128 RPL35AP18077 110 aaKnown RBP10.24□□□□□ -0.77
SMPD4-219ENST00000491128 LEPP41159 167 aa10.24□□□□□ -0.77
SMPD4-219ENST00000491128 RPS20P60866 119 aaKnown RBP10.24□□□□□ -0.77
SMPD4-219ENST00000491128 RIGQ13278 110 aa10.24□□□□□ -0.77
SMPD4-219ENST00000491128 MDFICQ9P1T7 246 aa10.24□□□□□ -0.77
SMPD4-219ENST00000491128 IGLL1P15814 213 aa10.24□□□□□ -0.77
SMPD4-219ENST00000491128 EVI2AP22794 236 aa10.24□□□□□ -0.77
SMPD4-219ENST00000491128 STHQ8IWL8 128 aa10.24□□□□□ -0.77
SMPD4-219ENST00000491128 RCHY1Q96PM5 261 aa10.24□□□□□ -0.77
SMPD4-219ENST00000491128 TRAV25A0A0B4J276 109 aa10.23□□□□□ -0.77
SMPD4-219ENST00000491128 MT-ND6P03923 174 aa10.23□□□□□ -0.77
SMPD4-219ENST00000491128 CTRLP40313 264 aa10.23□□□□□ -0.77
SMPD4-219ENST00000491128 SPANXN1Q5VSR9 72 aa10.23□□□□□ -0.77
SMPD4-219ENST00000491128 TRAV2A0A0B4J234 112 aa10.23□□□□□ -0.77
SMPD4-219ENST00000491128 RNASE3P12724 160 aaKnown RBP10.23□□□□□ -0.77
SMPD4-219ENST00000491128 Q8N1Y9 231 aa10.23□□□□□ -0.77
SMPD4-219ENST00000491128 DEFB125Q8N687 156 aa10.23□□□□□ -0.77
SMPD4-219ENST00000491128 NCR2O95944 276 aa10.22□□□□□ -0.77
SMPD4-219ENST00000491128 ASIPP42127 132 aa10.22□□□□□ -0.77
SMPD4-219ENST00000491128 LINC00310P59036 64 aa10.22□□□□□ -0.77
SMPD4-219ENST00000491128 DMRTA1Q5VZB9 504 aa10.22□□□□□ -0.77
SMPD4-219ENST00000491128 BAGE3Q86Y29 109 aa10.22□□□□□ -0.77
SMPD4-219ENST00000491128 C3orf56Q8N813 242 aa10.22□□□□□ -0.77
SMPD4-219ENST00000491128 JPT2Q9H910 190 aa10.22□□□□□ -0.77
SMPD4-219ENST00000491128 SERF1AO75920 110 aa10.21□□□□□ -0.77
SMPD4-219ENST00000491128 RASL11AQ6T310 242 aa10.21□□□□□ -0.77
SMPD4-219ENST00000491128 C19orf73Q9NVV2 129 aa10.21□□□□□ -0.77
SMPD4-219ENST00000491128 TRAV26-2A0A0B4J265 109 aa10.21□□□□□ -0.78
SMPD4-219ENST00000491128 TSPOP30536 169 aa10.21□□□□□ -0.78
SMPD4-219ENST00000491128 ALKBH7Q9BT30 221 aaPredicted RBP10.21□□□□□ -0.78
SMPD4-219ENST00000491128 PHLDA3Q9Y5J5 127 aa10.21□□□□□ -0.78
SMPD4-219ENST00000491128 ANK2Q01484 3957 aa10.21□□□□□ -0.78
SMPD4-219ENST00000491128 LOC102724200A0A096LPH7 203 aaPredicted RBP10.21□□□□□ -0.78
SMPD4-219ENST00000491128 TRBV7-9A0A0J9YWB2 115 aa10.21□□□□□ -0.78
SMPD4-219ENST00000491128 GATA1P15976 413 aaPredicted RBP10.21□□□□□ -0.78
SMPD4-219ENST00000491128 CMYA5Q8N3K9 4069 aa10.2□□□□□ -0.78
SMPD4-219ENST00000491128 CBY3A6NI87 242 aa10.2□□□□□ -0.78
SMPD4-219ENST00000491128 BEAN1Q3B7T3 259 aa10.2□□□□□ -0.78
SMPD4-219ENST00000491128 SNHG12Q9BXW3 62 aa10.2□□□□□ -0.78
SMPD4-219ENST00000491128 IGHV1OR15-1A0A075B7D0 117 aa10.2□□□□□ -0.78
SMPD4-219ENST00000491128 D6R8Y8 96 aa10.2□□□□□ -0.78
SMPD4-219ENST00000491128 G0S2P27469 103 aa10.2□□□□□ -0.78
SMPD4-219ENST00000491128 COA6Q5JTJ3 125 aaKnown RBP10.2□□□□□ -0.78
SMPD4-219ENST00000491128 C18orf32Q8TCD1 76 aa10.2□□□□□ -0.78
SMPD4-219ENST00000491128 ODF3Q96PU9 254 aa10.2□□□□□ -0.78
SMPD4-219ENST00000491128 COX19Q49B96 90 aa10.19□□□□□ -0.78
SMPD4-219ENST00000491128 C14orf178Q8N769 122 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-219ENST00000491128 CBY1Q9Y3M2 126 aa10.19□□□□□ -0.78
SMPD4-219ENST00000491128 MUC4Q99102 2169 aa10.19□□□□□ -0.78
SMPD4-219ENST00000491128 RAB4AP20338 218 aa10.19□□□□□ -0.78
SMPD4-219ENST00000491128 MRPL51Q4U2R6 128 aaKnown RBP10.19□□□□□ -0.78
SMPD4-219ENST00000491128 OXLD1Q5BKU9 147 aa10.19□□□□□ -0.78
SMPD4-219ENST00000491128 FAM104BQ5XKR9 115 aa10.19□□□□□ -0.78
SMPD4-219ENST00000491128 TRPT1Q86TN4 253 aaKnown RBP10.19□□□□□ -0.78
SMPD4-219ENST00000491128 LINC01587Q99440 93 aa10.19□□□□□ -0.78
SMPD4-219ENST00000491128 LOC389332A0A1B0GUA5 103 aa10.18□□□□□ -0.78
SMPD4-219ENST00000491128 SNAI2O43623 268 aa10.18□□□□□ -0.78
SMPD4-219ENST00000491128 OR5AL1P0C617 328 aa10.18□□□□□ -0.78
SMPD4-219ENST00000491128 PMCHL1Q16048 86 aa10.18□□□□□ -0.78
SMPD4-219ENST00000491128 FAM19A2Q8N3H0 131 aa10.18□□□□□ -0.78
SMPD4-219ENST00000491128 IGHV3-16A0A0C4DH30 117 aa10.18□□□□□ -0.78
SMPD4-219ENST00000491128 RNF185Q96GF1 192 aa10.18□□□□□ -0.78
SMPD4-219ENST00000491128 TMEM208Q9BTX3 173 aa10.18□□□□□ -0.78
SMPD4-219ENST00000491128 CNFNQ9BYD5 112 aa10.18□□□□□ -0.78
SMPD4-219ENST00000491128 NOTCH1P46531 2555 aa10.17□□□□□ -0.78
SMPD4-219ENST00000491128 A0A087WWL8 130 aa10.17□□□□□ -0.78
SMPD4-219ENST00000491128 AZU1P20160 251 aa10.17□□□□□ -0.78
SMPD4-219ENST00000491128 ZNF493Q6ZR52 646 aa10.17□□□□□ -0.78
SMPD4-219ENST00000491128 GIG44P09565 113 aaPredicted RBP10.17□□□□□ -0.78
SMPD4-219ENST00000491128 C9orf66Q5T8R8 295 aa10.17□□□□□ -0.78
SMPD4-219ENST00000491128 DEFB104AQ8WTQ1 72 aa10.17□□□□□ -0.78
SMPD4-219ENST00000491128 A8MTW9 85 aa10.16□□□□□ -0.78
SMPD4-219ENST00000491128 RNASEKQ6P5S7 137 aaKnown RBP10.16□□□□□ -0.78
SMPD4-219ENST00000491128 C12orf54Q6X4T0 127 aa10.16□□□□□ -0.78
SMPD4-219ENST00000491128 KCNS1Q96KK3 526 aa10.16□□□□□ -0.78
SMPD4-219ENST00000491128 PMCHP20382 165 aa10.16□□□□□ -0.78
SMPD4-219ENST00000491128 CKS2P33552 79 aa10.16□□□□□ -0.78
SMPD4-219ENST00000491128 C1orf158Q8N1D5 194 aa10.16□□□□□ -0.78
SMPD4-219ENST00000491128 URB1-AS1Q96HZ7 61 aa10.16□□□□□ -0.78
SMPD4-219ENST00000491128 TMEM191AQ9H0A3 160 aa10.16□□□□□ -0.78
SMPD4-219ENST00000491128 MGPP08493 103 aa10.15□□□□□ -0.78
SMPD4-219ENST00000491128 TDRG1Q3Y452 100 aa10.15□□□□□ -0.78
SMPD4-219ENST00000491128 FAM74A4Q5TZK3 123 aa10.15□□□□□ -0.78
SMPD4-219ENST00000491128 SCRT2Q9NQ03 307 aa10.15□□□□□ -0.78
SMPD4-219ENST00000491128 A0A1B0GW15 77 aa10.15□□□□□ -0.79
SMPD4-219ENST00000491128 Q0VG73 95 aa10.15□□□□□ -0.79
SMPD4-219ENST00000491128 C21orf62-AS1Q17RA5 79 aa10.15□□□□□ -0.79
SMPD4-219ENST00000491128 SAMD10Q9BYL1 202 aa10.15□□□□□ -0.79
SMPD4-219ENST00000491128 NPYP01303 97 aa10.14□□□□□ -0.79
SMPD4-219ENST00000491128 INSP01308 110 aa10.14□□□□□ -0.79
SMPD4-219ENST00000491128 ZNF25P17030 456 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-219ENST00000491128 ANKRD39Q53RE8 183 aa10.14□□□□□ -0.79
SMPD4-219ENST00000491128 GTSCR1Q86UQ5 136 aa10.14□□□□□ -0.79
SMPD4-219ENST00000491128 NIT1Q86X76 327 aa10.14□□□□□ -0.79
SMPD4-219ENST00000491128 ZNF747Q9BV97 191 aa10.14□□□□□ -0.79
SMPD4-219ENST00000491128 IGHV3-73A0A0B4J1V6 119 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms