RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 NPYP01303 97 aa10.06□□□□□ -0.8
RIPPLY3-203ENST00000490393 IGKV3-20P01619 116 aa10.06□□□□□ -0.8
RIPPLY3-203ENST00000490393 IFI27P40305 119 aaPredicted RBP10.06□□□□□ -0.8
RIPPLY3-203ENST00000490393 TEX43Q6ZNM6 134 aa10.06□□□□□ -0.8
RIPPLY3-203ENST00000490393 ZNF664Q8N3J9 261 aa10.06□□□□□ -0.8
RIPPLY3-203ENST00000490393 NOTCH2Q04721 2471 aa10.05□□□□□ -0.8
RIPPLY3-203ENST00000490393 IGHV1OR15-1A0A075B7D0 117 aa10.05□□□□□ -0.8
RIPPLY3-203ENST00000490393 KNCNA6PVL3 124 aa10.05□□□□□ -0.8
RIPPLY3-203ENST00000490393 SMKR1H3BMG3 65 aa10.05□□□□□ -0.8
RIPPLY3-203ENST00000490393 SPINK13Q1W4C9 94 aa10.05□□□□□ -0.8
RIPPLY3-203ENST00000490393 NDUFA11Q86Y39 141 aa10.05□□□□□ -0.8
RIPPLY3-203ENST00000490393 MRAP2Q96G30 205 aa10.05□□□□□ -0.8
RIPPLY3-203ENST00000490393 TRAV12-2A0A075B6T6 113 aa10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 CRXO43186 299 aaPredicted RBP10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 LEPROTL1O95214 131 aa10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 TNFRSF6BO95407 300 aa10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 BTF3P20290 206 aaKnown RBP10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 CMC4P56277 68 aaPredicted RBP10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 POM121L12Q8N7R1 296 aa10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 C9orf85Q96MD7 179 aa10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 MAP1LC3AQ9H492 121 aa10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 DPH3P1Q9H4G8 78 aa10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 IGHV3-16A0A0C4DH30 117 aa10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 M0R381 172 aa10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 CRLF1O75462 422 aa10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 CD7P09564 240 aa10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 OR2K2Q8NGT1 345 aa10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 TIMM8BQ9Y5J9 83 aaPredicted RBP10.04□□□□□ -0.8
RIPPLY3-203ENST00000490393 LOC389332A0A1B0GUA5 103 aa10.03□□□□□ -0.8
RIPPLY3-203ENST00000490393 NCR2O95944 276 aa10.03□□□□□ -0.8
RIPPLY3-203ENST00000490393 PMCHL1Q16048 86 aa10.03□□□□□ -0.8
RIPPLY3-203ENST00000490393 NRACQ8N912 160 aa10.03□□□□□ -0.8
RIPPLY3-203ENST00000490393 NXT2Q9NPJ8 142 aaKnown RBP10.03□□□□□ -0.8
RIPPLY3-203ENST00000490393 HSPB8Q9UJY1 196 aa10.03□□□□□ -0.8
RIPPLY3-203ENST00000490393 RBMY1BA6NDE4 496 aaKnown RBP10.02□□□□□ -0.8
RIPPLY3-203ENST00000490393 RBMY1EA6NEQ0 496 aaKnown RBP10.02□□□□□ -0.8
RIPPLY3-203ENST00000490393 TSTD3H0UI37 97 aa10.02□□□□□ -0.8
RIPPLY3-203ENST00000490393 GAS8-AS1O95177 125 aa10.02□□□□□ -0.8
RIPPLY3-203ENST00000490393 RBMY1DP0C7P1 496 aaKnown RBP10.02□□□□□ -0.8
RIPPLY3-203ENST00000490393 KRTAP10-3P60369 221 aa10.02□□□□□ -0.8
RIPPLY3-203ENST00000490393 TMEM70Q9BUB7 260 aa10.02□□□□□ -0.8
RIPPLY3-203ENST00000490393 KIF25-AS1Q9Y6Z4 181 aa10.02□□□□□ -0.8
RIPPLY3-203ENST00000490393 MUC4Q99102 2169 aa10.02□□□□□ -0.81
RIPPLY3-203ENST00000490393 ODF3L2Q3SX64 289 aa10.02□□□□□ -0.81
RIPPLY3-203ENST00000490393 Q8N1Y9 231 aa10.02□□□□□ -0.81
RIPPLY3-203ENST00000490393 AP1S3Q96PC3 154 aa10.02□□□□□ -0.81
RIPPLY3-203ENST00000490393 FAM110AQ9BQ89 295 aa10.02□□□□□ -0.81
RIPPLY3-203ENST00000490393 C20orf144Q9BQM9 153 aa10.02□□□□□ -0.81
RIPPLY3-203ENST00000490393 LINC00467Q9BRT7 94 aa10.02□□□□□ -0.81
RIPPLY3-203ENST00000490393 IGLV2-18A0A075B6J9 118 aa10.01□□□□□ -0.81
RIPPLY3-203ENST00000490393 TRGV11A0A075B6L2 103 aa10.01□□□□□ -0.81
RIPPLY3-203ENST00000490393 A0A096LNJ9 63 aa10.01□□□□□ -0.81
RIPPLY3-203ENST00000490393 IGLV1-51P01701 117 aa10.01□□□□□ -0.81
RIPPLY3-203ENST00000490393 ZNF124Q15973 351 aa10.01□□□□□ -0.81
RIPPLY3-203ENST00000490393 Q8N8P6 123 aa10.01□□□□□ -0.81
RIPPLY3-203ENST00000490393 GATA1P15976 413 aaPredicted RBP10□□□□□ -0.81
RIPPLY3-203ENST00000490393 LINC00315P59091 139 aa10□□□□□ -0.81
RIPPLY3-203ENST00000490393 NSUN5P1Q3KNT7 163 aa10□□□□□ -0.81
RIPPLY3-203ENST00000490393 C14orf178Q8N769 122 aaPredicted RBP10□□□□□ -0.81
RIPPLY3-203ENST00000490393 ZNF747Q9BV97 191 aa10□□□□□ -0.81
RIPPLY3-203ENST00000490393 MDFICQ9P1T7 246 aa10□□□□□ -0.81
RIPPLY3-203ENST00000490393 LINC00587B1AMM8 73 aa10□□□□□ -0.81
RIPPLY3-203ENST00000490393 SYS1-DBNDD2H3BUS1 97 aa10□□□□□ -0.81
RIPPLY3-203ENST00000490393 SPRY2O43597 315 aa10□□□□□ -0.81
RIPPLY3-203ENST00000490393 PPP1R17O96001 155 aa10□□□□□ -0.81
RIPPLY3-203ENST00000490393 RBMY1A1P0DJD3 496 aaKnown RBP10□□□□□ -0.81
RIPPLY3-203ENST00000490393 RBMY1CP0DJD4 496 aa10□□□□□ -0.81
RIPPLY3-203ENST00000490393 RBMY1FQ15415 496 aaKnown RBP10□□□□□ -0.81
RIPPLY3-203ENST00000490393 PET117Q6UWS5 81 aa10□□□□□ -0.81
RIPPLY3-203ENST00000490393 SPATA12Q7Z6I5 190 aa10□□□□□ -0.81
RIPPLY3-203ENST00000490393 MAP1LC3CQ9BXW4 147 aa10□□□□□ -0.81
RIPPLY3-203ENST00000490393 KIR2DL5BA0A0G2JN68 375 aa9.99□□□□□ -0.81
RIPPLY3-203ENST00000490393 KIR2DL5BA0A0G2JPC4 375 aa9.99□□□□□ -0.81
RIPPLY3-203ENST00000490393 OR11H12B2RN74 326 aa9.99□□□□□ -0.81
RIPPLY3-203ENST00000490393 SAP30O75446 220 aa9.99□□□□□ -0.81
RIPPLY3-203ENST00000490393 LINC00173Q6ZV60 143 aa9.99□□□□□ -0.81
RIPPLY3-203ENST00000490393 KIR2DL5AQ8N109 375 aa9.99□□□□□ -0.81
RIPPLY3-203ENST00000490393 SYT8Q8NBV8 401 aa9.99□□□□□ -0.81
RIPPLY3-203ENST00000490393 C20orf78Q9BR46 151 aa9.99□□□□□ -0.81
RIPPLY3-203ENST00000490393 PRO1933Q9H354 126 aa9.99□□□□□ -0.81
RIPPLY3-203ENST00000490393 HBDP02042 147 aa9.98□□□□□ -0.81
RIPPLY3-203ENST00000490393 FXYD7P58549 80 aa9.98□□□□□ -0.81
RIPPLY3-203ENST00000490393 BEAN1Q3B7T3 259 aa9.98□□□□□ -0.81
RIPPLY3-203ENST00000490393 PTH2Q96A98 100 aa9.98□□□□□ -0.81
RIPPLY3-203ENST00000490393 WNK1Q9H4A3 2382 aa9.98□□□□□ -0.81
RIPPLY3-203ENST00000490393 TRAV26-2A0A0B4J265 109 aa9.98□□□□□ -0.81
RIPPLY3-203ENST00000490393 RASL10AQ92737 203 aa9.98□□□□□ -0.81
RIPPLY3-203ENST00000490393 VAMP8Q9BV40 100 aa9.98□□□□□ -0.81
RIPPLY3-203ENST00000490393 HIVEP1P15822 2718 aa9.97□□□□□ -0.81
RIPPLY3-203ENST00000490393 SMIM17P0DL12 118 aa9.97□□□□□ -0.81
RIPPLY3-203ENST00000490393 DDTP30046 118 aa9.97□□□□□ -0.81
RIPPLY3-203ENST00000490393 FCER1GP30273 86 aa9.97□□□□□ -0.81
RIPPLY3-203ENST00000490393 PIK3CD-AS1Q5SR53 167 aa9.97□□□□□ -0.81
RIPPLY3-203ENST00000490393 TRPT1Q86TN4 253 aaKnown RBP9.97□□□□□ -0.81
RIPPLY3-203ENST00000490393 STHQ8IWL8 128 aa9.97□□□□□ -0.81
RIPPLY3-203ENST00000490393 SETXQ7Z333 2677 aaKnown RBP9.96□□□□□ -0.81
RIPPLY3-203ENST00000490393 CBY3A6NI87 242 aa9.96□□□□□ -0.81
RIPPLY3-203ENST00000490393 K7EMI3 77 aa9.96□□□□□ -0.81
RIPPLY3-203ENST00000490393 LINC00482Q8N8I6 264 aa9.96□□□□□ -0.81
RIPPLY3-203ENST00000490393 NSD1Q96L73 2696 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms