RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 PGPEP1LA6NFU8 196 aa12.81□□□□□ -0.36
UPK3B-205ENST00000490360 GAGE1Q13065 139 aa12.81□□□□□ -0.36
UPK3B-205ENST00000490360 GAGE4Q13068 117 aa12.81□□□□□ -0.36
UPK3B-205ENST00000490360 GAGE5Q13069 117 aa12.81□□□□□ -0.36
UPK3B-205ENST00000490360 GAGE13Q4V321 117 aa12.81□□□□□ -0.36
UPK3B-205ENST00000490360 NUDT15Q9NV35 164 aa12.81□□□□□ -0.36
UPK3B-205ENST00000490360 PKHD1L1Q86WI1 4243 aa12.8□□□□□ -0.36
UPK3B-205ENST00000490360 LYRM1O43325 122 aa12.8□□□□□ -0.36
UPK3B-205ENST00000490360 Q0VG73 95 aa12.8□□□□□ -0.36
UPK3B-205ENST00000490360 FFAR4Q5NUL3 377 aa12.8□□□□□ -0.36
UPK3B-205ENST00000490360 ATRAIDQ6UW56 229 aa12.8□□□□□ -0.36
UPK3B-205ENST00000490360 NIT1Q86X76 327 aa12.8□□□□□ -0.36
UPK3B-205ENST00000490360 KCNIP4Q6PIL6 250 aa12.79□□□□□ -0.36
UPK3B-205ENST00000490360 PQLC2Q6ZP29 291 aa12.79□□□□□ -0.36
UPK3B-205ENST00000490360 DAZAP1Q96EP5 407 aaKnown RBP12.79□□□□□ -0.36
UPK3B-205ENST00000490360 PARLQ9H300 379 aa12.79□□□□□ -0.36
UPK3B-205ENST00000490360 KLK12Q9UKR0 248 aa12.79□□□□□ -0.36
UPK3B-205ENST00000490360 A0A087WX48 190 aa12.78□□□□□ -0.36
UPK3B-205ENST00000490360 PLA2G10O15496 165 aa12.78□□□□□ -0.36
UPK3B-205ENST00000490360 Q6ZRU5 148 aa12.78□□□□□ -0.36
UPK3B-205ENST00000490360 K7EQM0 130 aa12.77□□□□□ -0.37
UPK3B-205ENST00000490360 RNASE3P12724 160 aaKnown RBP12.77□□□□□ -0.37
UPK3B-205ENST00000490360 UBE2WQ96B02 151 aa12.77□□□□□ -0.37
UPK3B-205ENST00000490360 LINC00479Q96M42 142 aa12.77□□□□□ -0.37
UPK3B-205ENST00000490360 OR5AC2Q9NZP5 309 aa12.77□□□□□ -0.37
UPK3B-205ENST00000490360 C11orf21Q9P2W6 132 aa12.77□□□□□ -0.37
UPK3B-205ENST00000490360 GCGP01275 180 aa12.76□□□□□ -0.37
UPK3B-205ENST00000490360 H2AFB2P0C5Z0 115 aa12.76□□□□□ -0.37
UPK3B-205ENST00000490360 MT1HL1P0DM35 61 aa12.76□□□□□ -0.37
UPK3B-205ENST00000490360 ZFP69Q49AA0 526 aa12.76□□□□□ -0.37
UPK3B-205ENST00000490360 HNRNPA3P51991 378 aaKnown RBP12.75□□□□□ -0.37
UPK3B-205ENST00000490360 OR2T35Q8NGX2 323 aa12.75□□□□□ -0.37
UPK3B-205ENST00000490360 SCGB1C1Q8TD33 95 aa12.75□□□□□ -0.37
UPK3B-205ENST00000490360 C1orf43Q9BWL3 253 aa12.75□□□□□ -0.37
UPK3B-205ENST00000490360 A0A1W2PPV4 95 aa12.74□□□□□ -0.37
UPK3B-205ENST00000490360 RHODO00212 210 aa12.74□□□□□ -0.37
UPK3B-205ENST00000490360 ZNF80P51504 273 aaPredicted RBP12.74□□□□□ -0.37
UPK3B-205ENST00000490360 LGALSLQ3ZCW2 172 aaPredicted RBP12.74□□□□□ -0.37
UPK3B-205ENST00000490360 SMUG1Q53HV7 270 aa12.74□□□□□ -0.37
UPK3B-205ENST00000490360 DGAT2L7PQ6IED9 249 aa12.74□□□□□ -0.37
UPK3B-205ENST00000490360 S100A4P26447 101 aaKnown RBP12.73□□□□□ -0.37
UPK3B-205ENST00000490360 GNG5P63218 68 aa12.73□□□□□ -0.37
UPK3B-205ENST00000490360 DNAJC30Q96LL9 226 aa12.73□□□□□ -0.37
UPK3B-205ENST00000490360 SAMD10Q9BYL1 202 aa12.73□□□□□ -0.37
UPK3B-205ENST00000490360 A0A0D9SG52 128 aa12.72□□□□□ -0.37
UPK3B-205ENST00000490360 CYCSP99999 105 aaKnown RBP12.72□□□□□ -0.37
UPK3B-205ENST00000490360 DMRTA1Q5VZB9 504 aa12.72□□□□□ -0.37
UPK3B-205ENST00000490360 C5orf17Q8NAS9 161 aa12.72□□□□□ -0.37
UPK3B-205ENST00000490360 RBM38Q9H0Z9 239 aaKnown RBP12.72□□□□□ -0.37
UPK3B-205ENST00000490360 TCRAP04437 139 aa12.71□□□□□ -0.37
UPK3B-205ENST00000490360 SAPCD1Q5SSQ6 148 aa12.71□□□□□ -0.37
UPK3B-205ENST00000490360 UFSP1Q6NVU6 142 aa12.71□□□□□ -0.37
UPK3B-205ENST00000490360 C14orf178Q8N769 122 aaPredicted RBP12.71□□□□□ -0.37
UPK3B-205ENST00000490360 TMEM75Q8N9X5 138 aa12.71□□□□□ -0.37
UPK3B-205ENST00000490360 SGK494Q96LW2 274 aa12.71□□□□□ -0.37
UPK3B-205ENST00000490360 Q9UF83 564 aa12.71□□□□□ -0.37
UPK3B-205ENST00000490360 PSG8Q9UQ74 426 aa12.71□□□□□ -0.37
UPK3B-205ENST00000490360 RNF213Q63HN8 5207 aa12.7□□□□□ -0.38
UPK3B-205ENST00000490360 LRRC37A5PQ49AS3 106 aa12.7□□□□□ -0.38
UPK3B-205ENST00000490360 HSD17B11Q8NBQ5 300 aa12.7□□□□□ -0.38
UPK3B-205ENST00000490360 OR10G7Q8NGN6 311 aa12.7□□□□□ -0.38
UPK3B-205ENST00000490360 OR2G3Q8NGZ4 309 aa12.7□□□□□ -0.38
UPK3B-205ENST00000490360 ASIPP42127 132 aa12.69□□□□□ -0.38
UPK3B-205ENST00000490360 FLI1Q01543 452 aaPredicted RBP12.69□□□□□ -0.38
UPK3B-205ENST00000490360 C9orf163Q8N9P6 203 aa12.69□□□□□ -0.38
UPK3B-205ENST00000490360 IL36BQ9NZH7 164 aa12.69□□□□□ -0.38
UPK3B-205ENST00000490360 FAM240BA0A1B0GVZ2 78 aa12.68□□□□□ -0.38
UPK3B-205ENST00000490360 H0YIZ8 118 aa12.68□□□□□ -0.38
UPK3B-205ENST00000490360 CRPP02741 224 aa12.68□□□□□ -0.38
UPK3B-205ENST00000490360 ZC2HC1AQ96GY0 325 aa12.68□□□□□ -0.38
UPK3B-205ENST00000490360 HSPB11Q9Y547 144 aa12.68□□□□□ -0.38
UPK3B-205ENST00000490360 TRBV10-1A0A0K0K1A3 114 aa12.67□□□□□ -0.38
UPK3B-205ENST00000490360 USP17L23D6RBM5 183 aa12.67□□□□□ -0.38
UPK3B-205ENST00000490360 LRP2P98164 4655 aa12.67□□□□□ -0.38
UPK3B-205ENST00000490360 EIF3GO75821 320 aaKnown RBP eCLIP12.66□□□□□ -0.38
UPK3B-205ENST00000490360 PET100P0DJ07 73 aa12.66□□□□□ -0.38
UPK3B-205ENST00000490360 PKIAP61925 76 aa12.66□□□□□ -0.38
UPK3B-205ENST00000490360 RPL36AP83881 106 aaKnown RBP12.66□□□□□ -0.38
UPK3B-205ENST00000490360 RPL19P84098 196 aaKnown RBP12.66□□□□□ -0.38
UPK3B-205ENST00000490360 PRNTQ86SH4 94 aa12.66□□□□□ -0.38
UPK3B-205ENST00000490360 RPL36ALQ969Q0 106 aaKnown RBP12.66□□□□□ -0.38
UPK3B-205ENST00000490360 IGKV3D-20A0A0C4DH25 116 aa12.65□□□□□ -0.38
UPK3B-205ENST00000490360 FABP5P3A8MUU1 101 aa12.65□□□□□ -0.38
UPK3B-205ENST00000490360 TMEM262E9PQX1 116 aa12.65□□□□□ -0.38
UPK3B-205ENST00000490360 SIX6O95475 246 aa12.65□□□□□ -0.38
UPK3B-205ENST00000490360 ENHOQ6UWT2 76 aa12.65□□□□□ -0.38
UPK3B-205ENST00000490360 JPT2Q9H910 190 aa12.65□□□□□ -0.38
UPK3B-205ENST00000490360 TRBV7-3A0A075B6L6 115 aa12.64□□□□□ -0.39
UPK3B-205ENST00000490360 ARL14EPLP0DKL9 152 aa12.64□□□□□ -0.39
UPK3B-205ENST00000490360 MIAQ16674 131 aa12.64□□□□□ -0.39
UPK3B-205ENST00000490360 MZT2BQ6NZ67 158 aa12.64□□□□□ -0.39
UPK3B-205ENST00000490360 CCDC32Q9BV29 185 aa12.64□□□□□ -0.39
UPK3B-205ENST00000490360 EPDR1Q9UM22 224 aa12.64□□□□□ -0.39
UPK3B-205ENST00000490360 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.64□□□□□ -0.39
UPK3B-205ENST00000490360 PRSS1P07477 247 aa12.63□□□□□ -0.39
UPK3B-205ENST00000490360 DNLZQ5SXM8 178 aa12.63□□□□□ -0.39
UPK3B-205ENST00000490360 FAM74A4Q5TZK3 123 aa12.63□□□□□ -0.39
UPK3B-205ENST00000490360 OR11H4Q8NGC9 324 aa12.63□□□□□ -0.39
UPK3B-205ENST00000490360 SUN5Q8TC36 379 aa12.63□□□□□ -0.39
UPK3B-205ENST00000490360 PPP1R1CQ8WVI7 109 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms